>RABB_DICDI (P34142) Ras-related protein RabB|
          Length = 213

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 124 LAQHANSFLPHMEIKSERLFIYIPDLSGDGRFYRRAPMVGSG 249
           + QHA  F  H+ I  +R+ + I D +G  RF+   P+   G
Sbjct: 38  MTQHAGFFQKHINIGGKRICLTIWDTAGQERFHALGPIYYRG 79

>EST1_MACFA (O46421) Liver carboxylesterase 1 precursor (EC 3.1.1.1)|
          Length = 566

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 107 WPAIQSWLNMQTPFSLTWKSNQSVYLYIYLTSAATGVFIGG 229
           +P  +  L+ +T  SL WKS   VY+   L   AT  ++GG
Sbjct: 365 YPLSEGKLDQKTAMSLLWKSYPLVYIAKELIPEATEKYLGG 405

>VAPI_BACNO (Q46560) Virulence-associated protein I|
          Length = 108

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = +2

Query: 95  IVRYWPA-IQSWLNMQTPFSLTW--KSNQSVYLYIYLTSAATGV 217
           +VRY+    QSWLNMQT + L    +  QS+ + I L++ A  V
Sbjct: 63  LVRYFGGDAQSWLNMQTAYDLKMAEQDKQSINIIIPLSTDARNV 106

>Y752_TREPA (O83733) Hypothetical protein TP0752 precursor|
          Length = 380

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 85  KNNHSTILAGHTELAQHANSFLPHMEIKSERLFIY 189
           K  H+T L  H  LA HA S   H+  + ERL  Y
Sbjct: 140 KKQHATFLVYHVWLALHAASTAAHLHEQLERLEEY 174

>GYRB_VIBCH (Q9KVX3) DNA gyrase subunit B (EC 5.99.1.3)|
          Length = 805

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = +2

Query: 23  GSVHGATYN----KASCLLKRERK*KTTIVRYWPAIQSWLNMQTPFSLTWK 163
           G +H  TY+    +A   +  E +   T VR+WP+ Q++ N++  + +  K
Sbjct: 138 GKIHSQTYHHGVPQAPLAVVGETERTGTTVRFWPSAQTFTNIEFHYDILAK 188

>SIRT3_MOUSE (Q8R104) NAD-dependent deacetylase sirtuin-3 (EC 3.5.1.-)|
           (SIR2-like protein 3) (mSIR2L3)
          Length = 257

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 18/41 (43%), Positives = 20/41 (48%)
 Frame = -1

Query: 168 FDFHVREKGVCMLSQLCMAGQYRTMVVFYFLSLLRRHEALL 46
           F FH   K   ML++    G YR  V  YFL LL   E LL
Sbjct: 42  FFFH-NPKPFFMLAKELYPGHYRPNVTHYFLRLLHDKELLL 81

>PSL1_HUMAN (Q8TCT7) Signal peptide peptidase-like 2B (EC 3.4.23.-) (Protein|
           SPP-like 2B) (Protein SPPL2b) (Intramembrane protease 4)
           (IMP4) (Presenilin-like protein 1)
          Length = 592

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -1

Query: 168 FDFHVREKGVCMLSQLCMAGQYRTMVVFYFLSLLRRHE-ALLYVAPCTL 25
           FD  V+   V  ++     G    +V F  L+L++R + ALLY+ PCTL
Sbjct: 435 FDIQVQSSRVYFVACTIAYG-VGLLVTFVALALMQRGQPALLYLVPCTL 482

>Y1704_AQUAE (O67601) Hypothetical protein aq_1704|
          Length = 416

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -1

Query: 123 LCMAGQYRTMVVFYFLSLLRRHEALLYVAPCTLPLYGLYL 4
           L  AG +  ++VFY LS  + H  +L+  P    + G YL
Sbjct: 268 LPFAGWFLLVLVFYSLSKNKLHHYILFSYPALSVIIGFYL 307


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,736,413
Number of Sequences: 219361
Number of extensions: 839843
Number of successful extensions: 2227
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2227
length of database: 80,573,946
effective HSP length: 62
effective length of database: 66,973,564
effective search space used: 1607365536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)