| Clone Name | rbaet38b04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC142325.5| Pan troglodytes BAC clone RP43-43D18 from Y, complete sequence Length = 199863 Score = 46.1 bits (23), Expect = 0.073 Identities = 23/23 (100%) Strand = Plus / Minus Query: 19 taaatgtataataacaataattt 41 ||||||||||||||||||||||| Sbjct: 58237 taaatgtataataacaataattt 58215
>dbj|BS000620.1| Pan troglodytes chromosome Y clone:PTB-548J12, complete sequences Length = 199682 Score = 46.1 bits (23), Expect = 0.073 Identities = 23/23 (100%) Strand = Plus / Minus Query: 19 taaatgtataataacaataattt 41 ||||||||||||||||||||||| Sbjct: 96778 taaatgtataataacaataattt 96756
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 46.1 bits (23), Expect = 0.073 Identities = 23/23 (100%) Strand = Plus / Plus Query: 19 taaatgtataataacaataattt 41 ||||||||||||||||||||||| Sbjct: 16005756 taaatgtataataacaataattt 16005778
>emb|AL445489.10| Human DNA sequence from clone RP11-230L22 on chromosome 9 Contains the 3' end of a gene for a novel delta-notch like protein (FLJ38464), the 5' end of the gene for a novel protein (KIAA1608), a novel gene and two CpG islands, complete sequence Length = 175869 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 91 gttctgcactctgcagccacacaaca 116 ||||||||||||||||||||| |||| Sbjct: 133912 gttctgcactctgcagccacataaca 133887
>emb|BX470232.17| Zebrafish DNA sequence from clone CH211-196F2 in linkage group 19, complete sequence Length = 194721 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 aataaatgtataataacaataa 38 |||||||||||||||||||||| Sbjct: 34198 aataaatgtataataacaataa 34177
>gb|AC092583.2| Homo sapiens BAC clone RP11-19B22 from 2, complete sequence Length = 155359 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 aaacaactaataaatgtataat 30 |||||||||||||||||||||| Sbjct: 88523 aaacaactaataaatgtataat 88544
>emb|CR318609.7| Zebrafish DNA sequence from clone DKEY-95L14 in linkage group 19, complete sequence Length = 75965 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 gttctgcactctgcagccaca 111 ||||||||||||||||||||| Sbjct: 64670 gttctgcactctgcagccaca 64690
>emb|BX546466.6| Zebrafish DNA sequence from clone DKEY-43N10 in linkage group 23, complete sequence Length = 109069 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 16 taataaatgtataataacaataatt 40 |||||| |||||||||||||||||| Sbjct: 38088 taataattgtataataacaataatt 38112
>emb|BX548035.8| Zebrafish DNA sequence from clone CH211-190F24 in linkage group 24, complete sequence Length = 156349 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 aatgtataataacaataattt 41 ||||||||||||||||||||| Sbjct: 113126 aatgtataataacaataattt 113106
>emb|AL359239.4|CNS05TEQ Human chromosome 14 DNA sequence BAC R-432I6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 169985 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 aataaatgtataataacaata 37 ||||||||||||||||||||| Sbjct: 55464 aataaatgtataataacaata 55484
>ref|XM_469173.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2535 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 675 tacttttccttcatccgtga 656
>ref|XM_469378.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2394 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 645 tacttttccttcatccgtga 626
>gb|AE014831.1| Plasmodium falciparum 3D7 chromosome 10 section 3 of 7 of the complete sequence Length = 250195 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 taataaatgtataataacaataat 39 ||||||||||||||||| |||||| Sbjct: 233467 taataaatgtataataataataat 233490
>gb|AC104712.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1333_C12, complete sequence Length = 102029 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 80159 tacttttccttcatccgtga 80140
>gb|AC146913.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013C12 map near S6115, complete sequence Length = 123718 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 30139 tacttttccttcatccgtga 30120
>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0025K21, complete sequence Length = 146539 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 28251 tacttttccttcatccgtga 28232
>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10, complete sequence Length = 157609 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 54248 tacttttccttcatccgtga 54229
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 107865 tacttttccttcatccgtga 107846
>gb|AC135420.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0060G17, complete sequence Length = 174949 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 115338 tacttttccttcatccgtga 115357
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 27646729 tacttttccttcatccgtga 27646710 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 25891352 tacttttccttcatccgtga 25891333 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 21779951 tacttttccttcatccgtga 21779970
>gb|AC135792.3| Oryza sativa chromosome 3 BAC OSJNBa0056E06 genomic sequence, complete sequence Length = 140720 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 116568 tacttttccttcatccgtga 116587
>emb|CR376775.7| Zebrafish DNA sequence from clone CH211-197C5 in linkage group 23, complete sequence Length = 196846 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 taataaatgtataataacaataat 39 |||||| ||||||||||||||||| Sbjct: 7765 taataattgtataataacaataat 7788
>emb|CR385066.13| Zebrafish DNA sequence from clone DKEY-220L23 in linkage group 3, complete sequence Length = 238822 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 taataaatgtataataacaataat 39 |||||| ||||||||||||||||| Sbjct: 70520 taataattgtataataacaataat 70543
>gb|AC099575.10| Mus musculus chromosome 14, clone RP23-83E2, complete sequence Length = 138102 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 agctcggggaatacttcaat 285 |||||||||||||||||||| Sbjct: 89600 agctcggggaatacttcaat 89581
>emb|AL590037.7| Human DNA sequence from clone RP11-129K24 on chromosome 6 Contains the 5' end of a variant of the BPAG1 gene for bullous pemphigoid antigen 1 (230/240kD), the 5' end of a novel gene, a novel pseudogene, a ferritin heavy polypeptide 1 (FTH1) pseudogene and a CpG island, complete sequence Length = 94153 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 aaatgtataataacaataat 39 |||||||||||||||||||| Sbjct: 64194 aaatgtataataacaataat 64175
>gb|AC120049.5| Homo sapiens chromosome 18, clone RP11-456K23, complete sequence Length = 125488 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 taataaatgtataataacaataat 39 ||||||||||||||||| |||||| Sbjct: 59216 taataaatgtataataataataat 59193
>emb|CR933822.8| Zebrafish DNA sequence from clone DKEY-30F7 in linkage group 19, complete sequence Length = 187377 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 taataaatgtataataacaataat 39 |||||| ||||||||||||||||| Sbjct: 138487 taataattgtataataacaataat 138464
>emb|BX537139.17| Zebrafish DNA sequence from clone DKEY-46K9 in linkage group 9, complete sequence Length = 243063 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 taataaatgtataataacaataat 39 |||||| ||||||||||||||||| Sbjct: 63926 taataattgtataataacaataat 63949
>emb|BX323824.17| Zebrafish DNA sequence from clone DKEY-37F18 in linkage group 25, complete sequence Length = 168743 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 taataaatgtataataacaataat 39 |||||||| ||||||||||||||| Sbjct: 62808 taataaatatataataacaataat 62831
>ref|XM_967818.1| PREDICTED: Tribolium castaneum similar to CG3064-PB (LOC661669), mRNA Length = 9420 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 agcccaagcccaaacccgaaaccg 139 ||||||||||||||||| |||||| Sbjct: 1988 agcccaagcccaaacccaaaaccg 2011
>emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0054B09, complete sequence Length = 146506 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 60924 tacttttccttcatccgtga 60943
>emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019J05, complete sequence Length = 185211 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 49222 tacttttccttcatccgtga 49203
>emb|CR376765.12| Zebrafish DNA sequence from clone DKEY-208L2 in linkage group 13, complete sequence Length = 134448 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 taataaatgtataataacaataat 39 ||||||||| |||||||||||||| Sbjct: 63482 taataaatgaataataacaataat 63459
>emb|CR626890.8| Zebrafish DNA sequence from clone DKEY-83J7 in linkage group 15, complete sequence Length = 211127 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 taataaatgtataataacaataat 39 |||||| ||||||||||||||||| Sbjct: 67755 taataattgtataataacaataat 67778
>emb|BX324206.6| Zebrafish DNA sequence from clone CH211-66O10 in linkage group 15, complete sequence Length = 164638 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 taataaatgtataataacaataat 39 |||||| ||||||||||||||||| Sbjct: 120244 taataattgtataataacaataat 120267
>dbj|AB201259.1| Balaenoptera brydei mitochondrial DNA, complete genome, isolate:NSMT-33072 Length = 16411 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 caaaacaactaataaatgta 26 |||||||||||||||||||| Sbjct: 8135 caaaacaactaataaatgta 8154
>dbj|AB201258.1| Balaenoptera edeni mitochondrial DNA, complete genome, isolate:NSMT-33622 Length = 16409 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 caaaacaactaataaatgta 26 |||||||||||||||||||| Sbjct: 8133 caaaacaactaataaatgta 8152
>dbj|AB201257.1| Balaenoptera omurai mitochondrial DNA, complete genome, isolate:NSMT-32992 Length = 16404 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 caaaacaactaataaatgta 26 |||||||||||||||||||| Sbjct: 8129 caaaacaactaataaatgta 8148
>dbj|AB201256.1| Balaenoptera omurai mitochondrial DNA, complete genome, isolate:NSMT-32505 Length = 16404 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 caaaacaactaataaatgta 26 |||||||||||||||||||| Sbjct: 8129 caaaacaactaataaatgta 8148
>emb|BX324151.11| Zebrafish DNA sequence from clone CH211-62C19 in linkage group 15, complete sequence Length = 182149 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 taataaatgtataataacaataat 39 |||||| ||||||||||||||||| Sbjct: 11514 taataattgtataataacaataat 11537
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 ccacacaacagcccaagccc 126 |||||||||||||||||||| Sbjct: 686391 ccacacaacagcccaagccc 686410
>gb|AC107988.4| Homo sapiens chromosome 18, clone CTC-346I21, complete sequence Length = 116247 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 taataaatgtataataacaataat 39 ||||||||||||||||| |||||| Sbjct: 30366 taataaatgtataataataataat 30389
>gb|AC113405.2| Homo sapiens chromosome 5 clone RP11-467C9, complete sequence Length = 134319 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 aaatgtataataacaataatttca 43 ||||||||||||||||||| |||| Sbjct: 59896 aaatgtataataacaataagttca 59919
>gb|AC093844.3| Homo sapiens BAC clone RP11-451F20 from 4, complete sequence Length = 196044 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ataataacaataatttcaca 45 |||||||||||||||||||| Sbjct: 63076 ataataacaataatttcaca 63095
>emb|BX890557.9| Zebrafish DNA sequence from clone DKEYP-8B8, complete sequence Length = 170862 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 taataaatgtataataacaataat 39 |||||| ||||||||||||||||| Sbjct: 100071 taataattgtataataacaataat 100094
>emb|BX247868.13| Zebrafish DNA sequence from clone DKEY-253A1 in linkage group 9, complete sequence Length = 258322 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 taataaatgtataataacaataat 39 |||||| ||||||||||||||||| Sbjct: 42172 taataattgtataataacaataat 42149
>gb|AC155883.2| Medicago truncatula chromosome 2 BAC clone mte1-80o18, complete sequence Length = 97452 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 taataaatgtataataacaataat 39 |||||||| ||||||||||||||| Sbjct: 40320 taataaatttataataacaataat 40343
>emb|BX294123.12| Zebrafish DNA sequence from clone DKEYP-16G7 in linkage group 2, complete sequence Length = 168359 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 aatgtataataacaataatt 40 |||||||||||||||||||| Sbjct: 146583 aatgtataataacaataatt 146602
>gb|AC021766.6| Homo sapiens, clone RP11-9H20, complete sequence Length = 151558 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 taataaatgtataataacaataat 39 ||||||||||||||||| |||||| Sbjct: 8124 taataaatgtataataataataat 8101
>emb|BX511032.6| Zebrafish DNA sequence from clone CH211-114B16 in linkage group 6, complete sequence Length = 183388 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 taataaatgtataataacaataat 39 ||||||||||| |||||||||||| Sbjct: 175948 taataaatgtaaaataacaataat 175925
>emb|BX323042.7| Zebrafish DNA sequence from clone DKEYP-78G2 in linkage group 6, complete sequence Length = 206473 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 taataaatgtataataacaataat 39 |||||| ||||||||||||||||| Sbjct: 125519 taataattgtataataacaataat 125496
>gb|AY005269.1| Xylocopa acutipennis cytochrome b (cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 384 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 aataaatgtataataacaataatt 40 ||||||||||||||||| |||||| Sbjct: 161 aataaatgtataataactataatt 138
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 24680981 tacttttccttcatccgtga 24680962 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 14223159 tacttttccttcatccgtga 14223178 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 12224341 tacttttccttcatccgtga 12224322
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 17714568 tacttttccttcatccgtga 17714587 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 9089400 tacttttccttcatccgtga 9089419
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 17299548 tacttttccttcatccgtga 17299529 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 12862803 tacttttccttcatccgtga 12862784
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 471254 tacttttccttcatccgtga 471273
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 14449451 tacttttccttcatccgtga 14449432 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 8025747 tacttttccttcatccgtga 8025766
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 27738052 tacttttccttcatccgtga 27738033 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 25982661 tacttttccttcatccgtga 25982642 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 21772980 tacttttccttcatccgtga 21772999
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 18201160 tacttttccttcatccgtga 18201179 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 12910398 tacttttccttcatccgtga 12910417 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 8024381 tacttttccttcatccgtga 8024400 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 7056970 tacttttccttcatccgtga 7056951
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 14006681 tacttttccttcatccgtga 14006700 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 12424413 tacttttccttcatccgtga 12424432 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 11177752 tacttttccttcatccgtga 11177771
>gb|AC012675.5|AC012675 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone BACR10E07, complete sequence Length = 176818 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gccaaccaaaacaactaata 20 |||||||||||||||||||| Sbjct: 102864 gccaaccaaaacaactaata 102845
>gb|AC130371.4| Homo sapiens chromosome 17, clone RP11-1197K16, complete sequence Length = 195613 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 cgttctgcactctgcagcca 109 |||||||||||||||||||| Sbjct: 194887 cgttctgcactctgcagcca 194906
>gb|AC154600.3| Mus musculus BAC clone RP23-338O2 from chromosome 14, complete sequence Length = 173591 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 agctcggggaatacttcaat 285 |||||||||||||||||||| Sbjct: 18577 agctcggggaatacttcaat 18558
>gb|AC022104.3|AC022104 Homo sapiens chromosome 5 clone CTC-257B12, complete sequence Length = 160703 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 aaatgtataataacaataatttca 43 ||||||||||||||||||| |||| Sbjct: 159360 aaatgtataataacaataagttca 159337
>dbj|AP006470.1| Balaenoptera borealis mitochondrial DNA, complete genome Length = 16410 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 caaaacaactaataaatgta 26 |||||||||||||||||||| Sbjct: 8135 caaaacaactaataaatgta 8154
>dbj|AP006469.1| Balaenoptera brydei mitochondrial DNA, complete genome Length = 16408 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 caaaacaactaataaatgta 26 |||||||||||||||||||| Sbjct: 8134 caaaacaactaataaatgta 8153
>dbj|AP006467.1| Megaptera novaeangliae mitochondrial DNA, complete genome Length = 16398 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 caaaacaactaataaatgta 26 |||||||||||||||||||| Sbjct: 8142 caaaacaactaataaatgta 8161
>gb|AC007972.4|AC007972 Homo sapiens clone RP11-537C24, complete sequence Length = 128289 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ataataacaataatttcaca 45 |||||||||||||||||||| Sbjct: 108901 ataataacaataatttcaca 108882
>gb|AC123974.6| Oryza sativa chromosome 3 BAC OSJNBb0021P10 genomic sequence, complete sequence Length = 136982 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 88426 tacttttccttcatccgtga 88407
>emb|AL929596.11| Zebrafish DNA sequence from clone DKEY-53H9, complete sequence Length = 191874 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 taataaatgtataataacaataat 39 |||||| ||||||||||||||||| Sbjct: 118137 taataattgtataataacaataat 118114
>emb|BX005481.11| Zebrafish DNA sequence from clone CH211-79C1 in linkage group 1, complete sequence Length = 170604 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 taataaatgtataataacaataat 39 |||||| ||||||||||||||||| Sbjct: 74770 taataattgtataataacaataat 74793
>dbj|AP005634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0584D02 Length = 147234 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 50025 tacttttccttcatccgtga 50044
>dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0495C02 Length = 151467 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 60389 tacttttccttcatccgtga 60370
>dbj|AP005909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0006G10 Length = 156293 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 95614 tacttttccttcatccgtga 95633
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 12574 tacttttccttcatccgtga 12593
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 166983 tacttttccttcatccgtga 167002
>dbj|AP003258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0463A02 Length = 151041 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 82426 tacttttccttcatccgtga 82445
>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1135C02 Length = 152306 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 10028 tacttttccttcatccgtga 10047
>dbj|AP003206.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1146F03 Length = 137047 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 69545 tacttttccttcatccgtga 69564
>dbj|AP003211.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0011P19 Length = 150811 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 110058 tacttttccttcatccgtga 110077
>emb|BX294006.4| Zebrafish DNA sequence from clone CH211-145M1 in linkage group 8, complete sequence Length = 171051 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ataataacaataatttcaca 45 |||||||||||||||||||| Sbjct: 132568 ataataacaataatttcaca 132549
>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A18 Length = 176755 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 129880 tacttttccttcatccgtga 129899
>dbj|AP005613.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0082C09 Length = 160665 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 147796 tacttttccttcatccgtga 147815
>dbj|AP005841.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052M16 Length = 145423 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 2373 tacttttccttcatccgtga 2392
>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0047E05 Length = 184323 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 124561 tacttttccttcatccgtga 124580
>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0688H12 Length = 139279 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 20041 tacttttccttcatccgtga 20060
>emb|BX294656.8| Zebrafish DNA sequence from clone CH211-238M13, complete sequence Length = 162077 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 taataaatgtataataacaataat 39 |||||| ||||||||||||||||| Sbjct: 51258 taataattgtataataacaataat 51281
>emb|BX248506.9| Zebrafish DNA sequence from clone DKEY-70K11 in linkage group 5, complete sequence Length = 230400 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 actctgcagccacacaacag 117 |||||||||||||||||||| Sbjct: 227414 actctgcagccacacaacag 227433
>emb|BX957279.13| Zebrafish DNA sequence from clone DKEY-218N20 in linkage group 19, complete sequence Length = 198752 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 taataaatgtataataacaataat 39 |||||| ||||||||||||||||| Sbjct: 20097 taataattgtataataacaataat 20074
>emb|CR391915.9| Zebrafish DNA sequence from clone CH211-130O18 in linkage group 19, complete sequence Length = 77634 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 taataaatgtataataacaataat 39 |||||| ||||||||||||||||| Sbjct: 45029 taataattgtataataacaataat 45006
>emb|BX005458.19| Zebrafish DNA sequence from clone CH211-173L10 in linkage group 18, complete sequence Length = 140289 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 taataaatgtataataacaataat 39 ||||||||||||||||| |||||| Sbjct: 113164 taataaatgtataataataataat 113141 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 taataaatgtataataacaataat 39 ||||||||||||||||| |||||| Sbjct: 113062 taataaatgtataataataataat 113039 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 taataaatgtataataacaataat 39 ||||||||||||||||| |||||| Sbjct: 113024 taataaatgtataataataataat 113001 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 taataaatgtataataacaataat 39 ||||||||||||||||| |||||| Sbjct: 112841 taataaatgtataataataataat 112818
>emb|BX321885.11| Zebrafish DNA sequence from clone CH211-240L19 in linkage group 4, complete sequence Length = 155649 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 taataaatgtataataacaataat 39 |||||| ||||||||||||||||| Sbjct: 44406 taataactgtataataacaataat 44383
>gb|AE003616.2| Drosophila melanogaster chromosome 2L, section 25 of 83 of the complete sequence Length = 267997 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gccaaccaaaacaactaata 20 |||||||||||||||||||| Sbjct: 156089 gccaaccaaaacaactaata 156070
>gb|AE015927.1| Clostridium tetani E88, complete genome Length = 2799251 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 18 ataaatgtataataacaataatttcaca 45 ||||| ||||||||| |||||||||||| Sbjct: 1701177 ataaaagtataataaaaataatttcaca 1701150
>dbj|AP002881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0035H10 Length = 109475 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 76485 tacttttccttcatccgtga 76504
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 17393179 tacttttccttcatccgtga 17393160 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 12943010 tacttttccttcatccgtga 12942991
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 17668939 tacttttccttcatccgtga 17668958 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 9089285 tacttttccttcatccgtga 9089304
>emb|AL713903.5|CNS07YQ3 Oryza sativa chromosome 12, . BAC OJ1471_C07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103007 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 28693 tacttttccttcatccgtga 28674
>emb|AL713909.5|CNS07YQ9 Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0073H17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 113494 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 66785 tacttttccttcatccgtga 66766
>emb|AL713954.3|CNS07YPZ Oryza sativa chromosome 12, . BAC OJ1134_G02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121600 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 117427 tacttttccttcatccgtga 117408
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11, complete sequence Length = 133856 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tacttttccttcatccgtga 251 |||||||||||||||||||| Sbjct: 70504 tacttttccttcatccgtga 70485 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,461,498 Number of Sequences: 3902068 Number of extensions: 3461498 Number of successful extensions: 85572 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84909 Number of HSP's gapped (non-prelim): 663 length of query: 340 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 318 effective length of database: 17,147,199,772 effective search space: 5452809527496 effective search space used: 5452809527496 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)