>ref|NM_186254.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 817

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 338 tcggcggcagtggcaccttgggcacg 363
           |||||||||||| |||||||||||||
Sbjct: 322 tcggcggcagtgccaccttgggcacg 297

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 338     tcggcggcagtggcaccttgggcacg 363
               |||||||||||| |||||||||||||
Sbjct: 2209297 tcggcggcagtgccaccttgggcacg 2209272

>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1351_C05
          Length = 112465

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 338   tcggcggcagtggcaccttgggcacg 363
             |||||||||||| |||||||||||||
Sbjct: 77199 tcggcggcagtgccaccttgggcacg 77174

>dbj|AK108897.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-F01, full
           insert sequence
          Length = 817

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 338 tcggcggcagtggcaccttgggcacg 363
           |||||||||||| |||||||||||||
Sbjct: 322 tcggcggcagtgccaccttgggcacg 297

>emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 in linkage group 11,
            complete sequence
          Length = 198600

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 217  gcagtttcatcacactcgtga 237
            |||||||||||||||||||||
Sbjct: 3565 gcagtttcatcacactcgtga 3585

>gb|AC091849.2| Homo sapiens chromosome 5 clone CTD-2245E15, complete sequence
          Length = 131371

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 148   cacaggtgctgctcaaacgaa 168
             |||||||||||||||||||||
Sbjct: 59909 cacaggtgctgctcaaacgaa 59889

>gb|AC105352.2| Drosophila melanogaster X BAC RP98-45O17 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 172784

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 166  gaatactatcaagttaaagta 186
            |||||||||||||||||||||
Sbjct: 2192 gaatactatcaagttaaagta 2212

>gb|BC089772.1| Rattus norvegicus mitogen activated protein kinase kinase 1, mRNA
            (cDNA clone MGC:108573 IMAGE:7382030), complete cds
          Length = 2145

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 167  aatactatcaagttaaagtaa 187
            |||||||||||||||||||||
Sbjct: 2102 aatactatcaagttaaagtaa 2122

>emb|Z16415.1|RNMAPKK R.norvegicus mRNA for MAP kinase kinase
          Length = 2136

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 167  aatactatcaagttaaagtaa 187
            |||||||||||||||||||||
Sbjct: 2090 aatactatcaagttaaagtaa 2110

>gb|AE003430.4| Drosophila melanogaster chromosome X, section 14 of 74 of the complete
              sequence
          Length = 296227

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 166    gaatactatcaagttaaagta 186
              |||||||||||||||||||||
Sbjct: 135884 gaatactatcaagttaaagta 135864

>ref|NM_031643.3| Rattus norvegicus mitogen activated protein kinase kinase 1 (Map2k1),
            mRNA
          Length = 2136

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 167  aatactatcaagttaaagtaa 187
            |||||||||||||||||||||
Sbjct: 2090 aatactatcaagttaaagtaa 2110

>dbj|D13341.1|RATMAPKKA Rattus norvegicus mRNA for MAP kinase kinase, complete cds
          Length = 2136

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 167  aatactatcaagttaaagtaa 187
            |||||||||||||||||||||
Sbjct: 2090 aatactatcaagttaaagtaa 2110

>gb|AC133098.7| Mus musculus BAC clone RP23-336L12 from chromosome 6, complete sequence
          Length = 182955

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    tacacacatccacaccacac 86
             ||||||||||||||||||||
Sbjct: 81781 tacacacatccacaccacac 81762

>gb|AC125076.4| Mus musculus BAC clone RP23-472F9 from chromosome 2, complete sequence
          Length = 165496

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    acaccacacgcaccaatcga 97
             ||||||||||||||||||||
Sbjct: 75393 acaccacacgcaccaatcga 75412

>gb|AC115298.6| Mus musculus BAC clone RP23-224G24 from X, complete sequence
          Length = 184032

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    aaatgtacaagcataaagta 68
             ||||||||||||||||||||
Sbjct: 47971 aaatgtacaagcataaagta 47952

>emb|AL358785.10| Human DNA sequence from clone RP11-245E14 on chromosome 6 Contains
            the 3' end of the gene for a novel protein similar to
            zinc finger protein 306 (ZNF306, ZFP47), the 3' end of
            gene KIAA0426, ESTs, STSs and GSSs, complete sequence
          Length = 17464

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 181  aaagtaaccatatggtttat 200
            ||||||||||||||||||||
Sbjct: 5195 aaagtaaccatatggtttat 5176

>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29
          Length = 290850

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 307    ggcacggccggcacaccggg 326
              ||||||||||||||||||||
Sbjct: 208545 ggcacggccggcacaccggg 208564

>gb|AC087894.15| Homo sapiens 12 BAC RP11-749H20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 169117

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 67     tacacacatccacaccacacgcac 90
              ||||||||| ||||||||||||||
Sbjct: 136930 tacacacatgcacaccacacgcac 136907

>ref|XM_688200.1| PREDICTED: Danio rerio similar to parathyroid hormone type-2 receptor
            precursor (LOC564876), mRNA
          Length = 2118

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 101  gatacgacacacgtaaacaa 120
            ||||||||||||||||||||
Sbjct: 1343 gatacgacacacgtaaacaa 1362

>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 367     ggaacggacggcatcggaggcaat 390
               |||||||||||||||| |||||||
Sbjct: 2537295 ggaacggacggcatcgaaggcaat 2537318

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 176      aagttaaagtaaccatatgg 195
                ||||||||||||||||||||
Sbjct: 14231804 aagttaaagtaaccatatgg 14231823

>gb|AC108491.4| Homo sapiens BAC clone RP11-138I17 from 4, complete sequence
          Length = 133452

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   ggaggcaatggcaccttggg 401
             ||||||||||||||||||||
Sbjct: 85256 ggaggcaatggcaccttggg 85237

>gb|AC113618.5| Homo sapiens BAC clone RP11-1367O10 from 2, complete sequence
          Length = 199917

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 67     tacacacatccacaccacacgcac 90
              ||||||||| ||||||||||||||
Sbjct: 141143 tacacacatacacaccacacgcac 141166

>gb|AC117376.3| Homo sapiens 12 BAC RP11-349K16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 177041

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 67     tacacacatccacaccacacgcac 90
              ||||||||| ||||||||||||||
Sbjct: 117575 tacacacatgcacaccacacgcac 117598

>gb|AC005678.1|AC005678 Homo sapiens PAC clone RP11-569I24 from 7, complete sequence
          Length = 187543

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   aaagtaaccatatggtttat 200
             ||||||||||||||||||||
Sbjct: 32866 aaagtaaccatatggtttat 32847

>dbj|AP002870.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0458A05
          Length = 120593

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   aagttaaagtaaccatatgg 195
             ||||||||||||||||||||
Sbjct: 27494 aagttaaagtaaccatatgg 27513

>emb|BX664720.7| Zebrafish DNA sequence from clone DKEYP-4H4 in linkage group 22,
            complete sequence
          Length = 121320

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 101  gatacgacacacgtaaacaa 120
            ||||||||||||||||||||
Sbjct: 4024 gatacgacacacgtaaacaa 4005

>emb|AL845453.6| Mouse DNA sequence from clone RP23-296G5 on chromosome 2, complete
             sequence
          Length = 159565

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    acaccacacgcaccaatcga 97
             ||||||||||||||||||||
Sbjct: 15940 acaccacacgcaccaatcga 15921


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,721,461
Number of Sequences: 3902068
Number of extensions: 2721461
Number of successful extensions: 59996
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59869
Number of HSP's gapped (non-prelim): 127
length of query: 412
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 390
effective length of database: 17,147,199,772
effective search space: 6687407911080
effective search space used: 6687407911080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)