| Clone Name | rbaet37f09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding protein Length = 869 Score = 103 bits (52), Expect = 1e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 808 acttgccgggcacaaagttggtggcataggcccatgcgttgttgttgacggggtcggcga 749 Query: 107 ggtg 110 |||| Sbjct: 748 ggtg 745
>gb|AY389597.1| Hyacinthus orientalis chloroplast chlorophyll a/b-binding protein mRNA, partial cds Length = 575 Score = 97.6 bits (49), Expect = 6e-18 Identities = 71/77 (92%), Gaps = 1/77 (1%) Strand = Plus / Minus Query: 35 tttcaagtgttt-acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttg 93 ||||||||| || |||||||||| ||||||||||||||||| ||||| || ||||||||| Sbjct: 483 tttcaagtgcttcacttgccggggacaaagttggtggcaaaagcccaggcattgttgttg 424 Query: 94 acggggtcggcgaggtg 110 ||||||||||||||||| Sbjct: 423 acggggtcggcgaggtg 407
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 91.7 bits (46), Expect = 4e-16 Identities = 61/66 (92%) Strand = Plus / Minus Query: 45 ttacttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 ||||||||||||||| ||||||||||| |||||||| || ||||||||||||||||||| Sbjct: 864 ttacttgccgggcacgaagttggtggcgaaggcccaggcgttgttgttgacggggtcgga 805 Query: 105 gaggtg 110 |||||| Sbjct: 804 gaggtg 799
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA, complete cds Length = 1022 Score = 87.7 bits (44), Expect = 6e-15 Identities = 59/64 (92%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| |||||||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 838 acttgccggggacaaagttggtggcgtaggcccatgcgttgttgttgacggggtcggcga 779 Query: 107 ggtg 110 |||| Sbjct: 778 ggtg 775
>gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 Score = 83.8 bits (42), Expect = 9e-14 Identities = 57/62 (91%) Strand = Plus / Minus Query: 45 ttacttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||||||||||| |||||||||||||| || ||||| || |||||||||||||||||||| Sbjct: 810 ttacttgccggggacaaagttggtggcgaatgcccatgcattgttgttgacggggtcggc 751 Query: 105 ga 106 || Sbjct: 750 ga 749
>gb|L23107.1|GBICABBP Ginkgo biloba nuclear-encoded chloroplast chlorophyll a/b binding protein mRNA, complete cds Length = 997 Score = 83.8 bits (42), Expect = 9e-14 Identities = 57/62 (91%) Strand = Plus / Minus Query: 49 ttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcgagg 108 |||||||| || ||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 867 ttgccggggacgaagttggtggcgaaggcccaggcgttgttgttgacggggtcggcgagg 808 Query: 109 tg 110 || Sbjct: 807 tg 806
>gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b protein gene, complete cds Length = 1633 Score = 81.8 bits (41), Expect = 4e-13 Identities = 56/61 (91%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| |||||||| || |||||||||||||||||||||| Sbjct: 1193 acttgccggggacgaagttggtggcgaaggcccaggcgttgttgttgacggggtcggcga 1134 Query: 107 g 107 | Sbjct: 1133 g 1133
>ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 79.8 bits (40), Expect = 1e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 796 acttgccggggacgaagttggtggcgtaggcccatgcgttgttgttgacggggtcggcga 737 Query: 107 ggtg 110 |||| Sbjct: 736 ggtg 733
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 79.8 bits (40), Expect = 1e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 784 acttgccggggacgaagttggtggcgtaggcccaggcgttgttgttgacggggtcggcga 725 Query: 107 ggtg 110 |||| Sbjct: 724 ggtg 721
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 79.8 bits (40), Expect = 1e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 1245 acttgccggggacgaagttggtggcgtaggcccaggcgttgttgttgacggggtcggcga 1186 Query: 107 ggtg 110 |||| Sbjct: 1185 ggtg 1182
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 79.8 bits (40), Expect = 1e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 13878 acttgccggggacgaagttggtggcgtaggcccatgcgttgttgttgacggggtcggcga 13937 Query: 107 ggtg 110 |||| Sbjct: 13938 ggtg 13941
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 79.8 bits (40), Expect = 1e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 30025133 acttgccggggacgaagttggtggcgtaggcccatgcgttgttgttgacggggtcggcga 30025074 Query: 107 ggtg 110 |||| Sbjct: 30025073 ggtg 30025070 Score = 79.8 bits (40), Expect = 1e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 23604327 acttgccggggacgaagttggtggcgtaggcccaggcgttgttgttgacggggtcggcga 23604268 Query: 107 ggtg 110 |||| Sbjct: 23604267 ggtg 23604264
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 79.8 bits (40), Expect = 1e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 21123 acttgccggggacgaagttggtggcgtaggcccatgcgttgttgttgacggggtcggcga 21064 Query: 107 ggtg 110 |||| Sbjct: 21063 ggtg 21060
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 79.8 bits (40), Expect = 1e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 67026 acttgccggggacgaagttggtggcgtaggcccaggcgttgttgttgacggggtcggcga 66967 Query: 107 ggtg 110 |||| Sbjct: 66966 ggtg 66963
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 79.8 bits (40), Expect = 1e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 855 acttgccggggacgaagttggtggcgtaggcccaggcgttgttgttgacggggtcggcga 796 Query: 107 ggtg 110 |||| Sbjct: 795 ggtg 792
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 79.8 bits (40), Expect = 1e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 854 acttgccggggacgaagttggtggcgtaggcccaggcgttgttgttgacggggtcggcga 795 Query: 107 ggtg 110 |||| Sbjct: 794 ggtg 791
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 79.8 bits (40), Expect = 1e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 1284 acttgccggggacgaagttggtggcgtaggcccaggcgttgttgttgacggggtcggcga 1225 Query: 107 ggtg 110 |||| Sbjct: 1224 ggtg 1221
>emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting chlorophyll a/b- binding protein ( LHCP ) Length = 1030 Score = 79.8 bits (40), Expect = 1e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 44 tttacttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcgg 103 ||||||||||||| || ||||||||||| |||||||| || |||||||| |||||||||| Sbjct: 976 tttacttgccggggacgaagttggtggcgaaggcccaggcattgttgtttacggggtcgg 917 Query: 104 cgag 107 |||| Sbjct: 916 cgag 913
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 79.8 bits (40), Expect = 1e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 877 acttgccggggacgaagttggtggcgtaggcccatgcgttgttgttgacggggtcggcga 818 Query: 107 ggtg 110 |||| Sbjct: 817 ggtg 814
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 79.8 bits (40), Expect = 1e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 877 acttgccggggacgaagttggtggcgtaggcccatgcgttgttgttgacggggtcggcga 818 Query: 107 ggtg 110 |||| Sbjct: 817 ggtg 814
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 79.8 bits (40), Expect = 1e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 879 acttgccggggacgaagttggtggcgtaggcccatgcgttgttgttgacggggtcggcga 820 Query: 107 ggtg 110 |||| Sbjct: 819 ggtg 816
>dbj|AK061619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E02, full insert sequence Length = 650 Score = 79.8 bits (40), Expect = 1e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 384 acttgccggggacgaagttggtggcgtaggcccaggcgttgttgttgacggggtcggcga 325 Query: 107 ggtg 110 |||| Sbjct: 324 ggtg 321
>dbj|AK058312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H12, full insert sequence Length = 1040 Score = 79.8 bits (40), Expect = 1e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 862 acttgccggggacgaagttggtggcgtaggcccatgcgttgttgttgacggggtcggcga 803 Query: 107 ggtg 110 |||| Sbjct: 802 ggtg 799
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 79.8 bits (40), Expect = 1e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 879 acttgccggggacgaagttggtggcgtaggcccatgcgttgttgttgacggggtcggcga 820 Query: 107 ggtg 110 |||| Sbjct: 819 ggtg 816
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 71.9 bits (36), Expect = 4e-10 Identities = 57/64 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| | ||||| || |||||||||||||||||||||| Sbjct: 10793780 acttgccggggacgaagttggtggcgtacgcccaggcgttgttgttgacggggtcggcga 10793721 Query: 107 ggtg 110 |||| Sbjct: 10793720 ggtg 10793717
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 71.9 bits (36), Expect = 4e-10 Identities = 57/64 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| | ||||| || |||||||||||||||||||||| Sbjct: 17503 acttgccggggacgaagttggtggcgtacgcccaggcgttgttgttgacggggtcggcga 17444 Query: 107 ggtg 110 |||| Sbjct: 17443 ggtg 17440
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 71.9 bits (36), Expect = 4e-10 Identities = 57/64 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| | ||||| || |||||||||||||||||||||| Sbjct: 130398 acttgccggggacgaagttggtggcgtacgcccaggcgttgttgttgacggggtcggcga 130339 Query: 107 ggtg 110 |||| Sbjct: 130338 ggtg 130335
>emb|X02358.1|PECAB25 Petunia gene for chlorophyll a/b binding protein cab 25 Length = 1184 Score = 71.9 bits (36), Expect = 4e-10 Identities = 57/64 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||| ||||| |||||||| ||||||||||||||||| |||||||| |||||||| || | Sbjct: 1029 actttccgggaacaaagtttgtggcaaaggcccacgcattgttgttaacggggtcagcaa 970 Query: 107 ggtg 110 |||| Sbjct: 969 ggtg 966
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 71.9 bits (36), Expect = 4e-10 Identities = 57/64 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| | ||||| || |||||||||||||||||||||| Sbjct: 848 acttgccggggacgaagttggtggcgtacgcccaggcgttgttgttgacggggtcggcga 789 Query: 107 ggtg 110 |||| Sbjct: 788 ggtg 785
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 71.9 bits (36), Expect = 4e-10 Identities = 57/64 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| | ||||| || |||||||||||||||||||||| Sbjct: 853 acttgccggggacgaagttggtggcgtacgcccaggcgttgttgttgacggggtcggcga 794 Query: 107 ggtg 110 |||| Sbjct: 793 ggtg 790
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 71.9 bits (36), Expect = 4e-10 Identities = 57/64 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| | ||||| || |||||||||||||||||||||| Sbjct: 855 acttgccggggacgaagttggtggcgtacgcccaggcgttgttgttgacggggtcggcga 796 Query: 107 ggtg 110 |||| Sbjct: 795 ggtg 792
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 71.9 bits (36), Expect = 4e-10 Identities = 57/64 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| | ||||| || |||||||||||||||||||||| Sbjct: 853 acttgccggggacgaagttggtggcgtacgcccaggcgttgttgttgacggggtcggcga 794 Query: 107 ggtg 110 |||| Sbjct: 793 ggtg 790
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 71.9 bits (36), Expect = 4e-10 Identities = 57/64 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| | ||||| || |||||||||||||||||||||| Sbjct: 853 acttgccggggacgaagttggtggcgtacgcccaggcgttgttgttgacggggtcggcga 794 Query: 107 ggtg 110 |||| Sbjct: 793 ggtg 790
>gb|K00976.1|PETCAB102 Petunia major chlorophyll a/b binding protein (Cab) clone pCab102, 3' end and flank Length = 302 Score = 71.9 bits (36), Expect = 4e-10 Identities = 57/64 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||| ||||| |||||||| ||||||||||||||||| |||||||| |||||||| || | Sbjct: 187 actttccgggaacaaagtttgtggcaaaggcccacgcattgttgttaacggggtcagcaa 128 Query: 107 ggtg 110 |||| Sbjct: 127 ggtg 124
>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 1022 Score = 71.9 bits (36), Expect = 4e-10 Identities = 57/64 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| | ||||| || |||||||||||||||||||||| Sbjct: 834 acttgccggggacgaagttggtggcgtacgcccaggcgttgttgttgacggggtcggcga 775 Query: 107 ggtg 110 |||| Sbjct: 774 ggtg 771
>gb|AC139600.16| Medicago truncatula clone mth2-20m4, complete sequence Length = 124732 Score = 69.9 bits (35), Expect = 1e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtc 101 |||| ||||| |||||||| |||||||||||||| || ||||||||||||||||| Sbjct: 215 actttccggggacaaagtttgtggcaaaggcccaagcgttgttgttgacggggtc 161 Score = 50.1 bits (25), Expect = 0.001 Identities = 43/49 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgac 95 |||| ||||| |||||||| |||||||||||||| || ||| ||||||| Sbjct: 2071 actttccgggaacaaagtttgtggcaaaggcccaagcgttgctgttgac 2023
>ref|NM_102732.2| Arabidopsis thaliana CAB2; chlorophyll binding AT1G29920 (CAB2) mRNA, complete cds Length = 1176 Score = 67.9 bits (34), Expect = 6e-09 Identities = 52/58 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| ||||||||||||||||||||||| || ||||||||||| || ||||| Sbjct: 869 actttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcggc 812
>gb|BT015572.1| Arabidopsis thaliana At1g29910 mRNA sequence Length = 762 Score = 67.9 bits (34), Expect = 6e-09 Identities = 52/58 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| ||||||||||||||||||||||| || ||||||||||| || ||||| Sbjct: 760 actttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcggc 703
>emb|X53398.1|ZMCABM7 Z.mays cab-m7 gene for light harvesting chlorophyll a/b binding protein Length = 2261 Score = 67.9 bits (34), Expect = 6e-09 Identities = 52/58 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||||||||| || ||||||||||| ||||||| || |||||||||||||||||||| Sbjct: 1808 acttgccggggacgaagttggtggcgtaggcccaagcgttgttgttgacggggtcggc 1751
>gb|BT000726.1| Arabidopsis thaliana clone RAFL06-67-G16 (R11472) putative photosystem II type I chlorophyll a /b binding protein (At1g29920) mRNA, complete cds Length = 1044 Score = 67.9 bits (34), Expect = 6e-09 Identities = 52/58 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| ||||||||||||||||||||||| || ||||||||||| || ||||| Sbjct: 855 actttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcggc 798
>gb|AY128345.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding protein, putative (At1g29920) mRNA, complete cds Length = 994 Score = 67.9 bits (34), Expect = 6e-09 Identities = 52/58 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| ||||||||||||||||||||||| || ||||||||||| || ||||| Sbjct: 855 actttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcggc 798
>gb|AY081572.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29920) mRNA, complete cds Length = 898 Score = 67.9 bits (34), Expect = 6e-09 Identities = 52/58 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| ||||||||||||||||||||||| || ||||||||||| || ||||| Sbjct: 802 actttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcggc 745
>gb|AY062814.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29920; F1N18.4) mRNA, complete cds Length = 1007 Score = 67.9 bits (34), Expect = 6e-09 Identities = 52/58 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| ||||||||||||||||||||||| || ||||||||||| || ||||| Sbjct: 854 actttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcggc 797
>gb|AY060500.1| Arabidopsis thaliana At1g29920/F1N18_80 mRNA, complete cds Length = 804 Score = 67.9 bits (34), Expect = 6e-09 Identities = 52/58 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| ||||||||||||||||||||||| || ||||||||||| || ||||| Sbjct: 802 actttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcggc 745
>gb|AY054198.1| Arabidopsis thaliana At1g29920/F1N18_80 mRNA, complete cds Length = 1027 Score = 67.9 bits (34), Expect = 6e-09 Identities = 52/58 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| ||||||||||||||||||||||| || ||||||||||| || ||||| Sbjct: 848 actttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcggc 791
>gb|AY052237.1| Arabidopsis thaliana At1g29920/F1N18_80 mRNA, complete cds Length = 1027 Score = 67.9 bits (34), Expect = 6e-09 Identities = 52/58 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| ||||||||||||||||||||||| || ||||||||||| || ||||| Sbjct: 854 actttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcggc 797
>dbj|AB211497.1| Lemna paucicostata LpCAB1 mRNA for CAB homologue1, partial cds Length = 695 Score = 67.9 bits (34), Expect = 6e-09 Identities = 46/50 (92%) Strand = Plus / Minus Query: 61 aagttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 ||||||||||| |||||||| || ||||||||||||||||| |||||||| Sbjct: 693 aagttggtggcgaaggcccaggcgttgttgttgacggggtcagcgaggtg 644
>gb|AC008030.4|AC008030 Arabidopsis thaliana chromosome I BAC F1N18 genomic sequence, complete sequence Length = 101075 Score = 67.9 bits (34), Expect = 6e-09 Identities = 52/58 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| ||||||||||||||||||||||| || ||||||||||| || ||||| Sbjct: 19894 actttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcggc 19837 Score = 52.0 bits (26), Expect = 3e-04 Identities = 50/58 (86%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| ||||||||||| || |||||||| || ||||||||||| || ||||| Sbjct: 22540 actttccgggaacaaagttggttgcgaaggcccatgcgttgttgttgactggatcggc 22483 Score = 52.0 bits (26), Expect = 3e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgtt 92 |||| ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 16113 actttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 16158
>gb|AY086905.1| Arabidopsis thaliana clone 29298 mRNA, complete sequence Length = 1041 Score = 67.9 bits (34), Expect = 6e-09 Identities = 52/58 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| ||||||||||||||||||||||| || ||||||||||| || ||||| Sbjct: 869 actttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcggc 812
>emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll a/b binding protein LHCP Length = 967 Score = 67.9 bits (34), Expect = 6e-09 Identities = 52/58 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||||||||| || ||||||||||| ||||||| || |||||||||||||||||||| Sbjct: 860 acttgccggggacgaagttggtggcgtaggcccaagcgttgttgttgacggggtcggc 803
>emb|X03907.1|ATLHCP1 A.thaliana gene (LHCP AB 165) for chlorophyll a/b binding protein Length = 999 Score = 67.9 bits (34), Expect = 6e-09 Identities = 52/58 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| ||||||||||||||||||||||| || ||||||||||| || ||||| Sbjct: 947 actttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcggc 890
>emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein Length = 934 Score = 67.9 bits (34), Expect = 6e-09 Identities = 52/58 (89%) Strand = Plus / Minus Query: 49 ttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||| || ||||| |||||||| ||||| || |||||||||||||||||||||| Sbjct: 815 ttgccggggacgaagtttgtggcaaatgcccaagcgttgttgttgacggggtcggcga 758
>gb|AY109324.1| Zea mays CL187_1 mRNA sequence Length = 2262 Score = 67.9 bits (34), Expect = 6e-09 Identities = 52/58 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||||||||| || ||||||||||| ||||||| || |||||||||||||||||||| Sbjct: 1808 acttgccggggacgaagttggtggcgtaggcccaagcgttgttgttgacggggtcggc 1751
>gb|AF072931.1|AF072931 Medicago sativa chlorophyll a/b binding protein (CARCAB1) mRNA, complete cds Length = 983 Score = 67.9 bits (34), Expect = 6e-09 Identities = 52/58 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| ||||||||||||||| ||||||| || ||||||||||| |||||||| Sbjct: 850 actttccgggaacaaagttggtggcataggcccatgcgttgttgttgactgggtcggc 793
>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor Length = 2780 Score = 63.9 bits (32), Expect = 9e-08 Identities = 56/64 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| | ||||| || ||||||||||||||||||| || Sbjct: 2719 acttgccggggacgaagttggtggcgtaagcccaggcgttgttgttgacggggtcggtga 2660 Query: 107 ggtg 110 |||| Sbjct: 2659 ggtg 2656
>gb|AF003127.1|AF003127 Mesembryanthemum crystallinum chlorophyll a/b-binding protein (CAB) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1042 Score = 63.9 bits (32), Expect = 9e-08 Identities = 56/64 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| |||||||| || ||||||||||| ||||| || | Sbjct: 826 acttgccgggaacgaagttggtggcgaaggcccaagcattgttgttgactgggtcagcaa 767 Query: 107 ggtg 110 |||| Sbjct: 766 ggtg 763
>gb|M12152.1|LGIAB19A Lemna gibba chlorophyll a/b apoprotein gene, complete cds Length = 1913 Score = 63.9 bits (32), Expect = 9e-08 Identities = 53/60 (88%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| |||||||| || |||||| |||||||||||||| Sbjct: 1532 acttgccggggacgaagttggtggcgaaggcccaggcgttgttggcgacggggtcggcga 1473
>gb|L07119.1|COTIIABINA Gossypium hirsutum chloroplast photosystem II chlorophyll A/B-binding protein gene, complete cds Length = 1260 Score = 63.9 bits (32), Expect = 9e-08 Identities = 56/64 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||| ||||| ||||||||||||||| ||||||| || ||||||||||| ||||| || | Sbjct: 990 actttccggggacaaagttggtggcataggcccaagcattgttgttgactgggtcagcaa 931 Query: 107 ggtg 110 |||| Sbjct: 930 ggtg 927
>gb|AY430082.1| Trifolium pratense chlorophyll a/b binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 987 Score = 61.9 bits (31), Expect = 3e-07 Identities = 49/55 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtc 101 |||| ||||| ||||||||||||||||| ||||| || ||||||||||| ||||| Sbjct: 851 actttccgggaacaaagttggtggcaaaagcccaggcgttgttgttgactgggtc 797
>gb|AF279249.1|AF279249 Vigna radiata LHCII type I chlorophyll a/b-binding protein (CipLhcb1*2) mRNA, complete cds; nuclear gene for chloroplast product Length = 932 Score = 61.9 bits (31), Expect = 3e-07 Identities = 58/67 (86%) Strand = Plus / Minus Query: 44 tttacttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcgg 103 ||||||| || || |||||||||||||| ||||||| || ||||||||||| ||||||| Sbjct: 852 tttactttccagggacaaagttggtggcgtaggcccaggcgttgttgttgacagggtcgg 793 Query: 104 cgaggtg 110 | ||||| Sbjct: 792 caaggtg 786
>emb|AJ131044.1|CAR131044 Cicer arietinum mRNA for chlorophyll a/b binding protein Length = 983 Score = 61.9 bits (31), Expect = 3e-07 Identities = 49/55 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtc 101 |||| ||||| ||||||||||||||| ||||||| || ||||||||||| ||||| Sbjct: 813 actttccgggaacaaagttggtggcataggcccatgcattgttgttgacagggtc 759
>ref|NM_001036402.1| Arabidopsis thaliana O-acetyltransferase AT2G34410 transcript variant AT2G34410.3 mRNA, complete cds Length = 3299 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 2487 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 2544
>ref|NM_001036401.1| Arabidopsis thaliana O-acetyltransferase AT2G34410 transcript variant AT2G34410.2 mRNA, complete cds Length = 3338 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 2487 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 2544
>ref|NM_128994.2| Arabidopsis thaliana LHB1B2; chlorophyll binding AT2G34420 (LHB1B2) transcript variant AT2G34420.1 mRNA, complete cds Length = 1354 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 851 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 794
>ref|NM_179900.1| Arabidopsis thaliana LHB1B2 AT2G34420 (LHB1B2) transcript variant AT2G34420.2 mRNA, complete cds Length = 1312 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 809 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 752
>gb|AY389549.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 3C (LHCP) mRNA, partial cds Length = 661 Score = 60.0 bits (30), Expect = 1e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 61 aagttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||||||||| ||||| || |||||||||||||| ||||| ||||| Sbjct: 658 aagttggtggcaaacgcccaggcattgttgttgacgggatcggcaaggtg 609
>gb|AY142513.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 829 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 796 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 739
>gb|AY045806.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 1015 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 851 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 794
>emb|AJ313013.1|PCO313013 Pinus contorta cab gene for chlorophyll a/b binding protein Length = 1197 Score = 60.0 bits (30), Expect = 1e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 49 ttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcgagg 108 |||||||| || |||||||||||| ||||||| || |||||| | ||||||||||| ||| Sbjct: 884 ttgccggggacgaagttggtggcataggcccaggcgttgttgctaacggggtcggccagg 825 Query: 109 tg 110 || Sbjct: 824 tg 823
>gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete sequence Length = 112763 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 93205 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 93262 Score = 42.1 bits (21), Expect = 0.32 Identities = 42/49 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgac 95 |||| ||||| || |||||||| || |||||||| || ||||||||||| Sbjct: 96103 actttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 96055
>gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 map ve016, complete sequence Length = 93060 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 80997 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 80940 Score = 42.1 bits (21), Expect = 0.32 Identities = 42/49 (85%) Strand = Plus / Plus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgac 95 |||| ||||| || |||||||| || |||||||| || ||||||||||| Sbjct: 78099 actttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 78147
>gb|AY081587.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 883 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 796 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 739
>gb|AY079110.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 798 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 796 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 739
>gb|AY079101.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 798 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 796 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 739
>gb|AY065125.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding protein (At2g34420; T31E10.24) mRNA, complete cds Length = 969 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 847 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 790
>gb|AF419587.1|AF419587 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 847 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 790
>gb|AF419548.1|AF419548 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 847 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 790
>gb|AF428397.1|AF428397 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 1024 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 847 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 790
>gb|AY039561.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 995 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 847 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 790
>gb|AF372886.1|AF372886 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 847 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 790
>emb|BX819530.1|CNS0A9V8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB87ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 291 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 167 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 110
>emb|BX820019.1|CNS0A9C1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS62ZC05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 903 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 828 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 771
>emb|BX820007.1|CNS0A9CM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS5ZF09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 885 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 831 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 774
>emb|BX822910.1|CNS0A63G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB71ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 919 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 88 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 145
>emb|X64460.1|ATLH1B2 A.thaliana Lhb1B2 gene for photosystem II chlorophyll a/b binding protein Length = 1405 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 1096 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 1039
>emb|X67714.1|PCCABA P.contorta cab gene for chlorophyll a/b binding protein Length = 2574 Score = 60.0 bits (30), Expect = 1e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 49 ttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcgagg 108 |||||||| || |||||||||||| ||||||| || |||||| | ||||||||||| ||| Sbjct: 1962 ttgccggggacgaagttggtggcataggcccaggcgttgttgctaacggggtcggccagg 1903 Query: 109 tg 110 || Sbjct: 1902 tg 1901
>emb|X81808.1|PALHCB1 P.abies (L.)Karst. Lhcb1*1 mRNA for light-harvesting chlorophyll a/b-binding protein Length = 1078 Score = 60.0 bits (30), Expect = 1e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 49 ttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcgagg 108 ||||| || |||||||||||||| ||||||| || ||||||||||| ||||| |||||| Sbjct: 834 ttgccagggacaaagttggtggcgtaggcccaggcgttgttgttgacagggtcagcgagg 775 Query: 109 tg 110 || Sbjct: 774 tg 773
>gb|U51633.1|PPU51633 Pinus palustris type 1 light-harvesting chlorophyll a/b-binding polypeptide (Lhcb1) mRNA, partial cds Length = 414 Score = 60.0 bits (30), Expect = 1e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 61 aagttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||||||| ||||||| || |||||||| ||||||||||| ||||| Sbjct: 273 aagttggtggcataggcccaggcgttgttgttaacggggtcggccaggtg 224
>gb|M30620.1|TOMCBPE2 Tomato chlorophyll a/b-binding protein Cab-3A gene, 3' end Length = 351 Score = 60.0 bits (30), Expect = 1e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| |||||||| |||||||||||||| || |||||||| || |||||||| Sbjct: 349 actttccgggaacaaagtttgtggcaaaggcccaggcgttgttgttaactgggtcggc 292
>gb|AF458406.1|AF458406 Brassica oleracea chlorophyll a/b binding protein (CAB1) mRNA, complete cds Length = 980 Score = 58.0 bits (29), Expect = 5e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgac 95 |||| ||||| || |||||||||||||||||||| || ||||||||||| Sbjct: 841 actttccggggacgaagttggtggcaaaggcccatgcattgttgttgac 793
>emb|X02357.1|PECAB13 Petunia gene for chlorophyll a/b binding protein cab 13 Length = 1019 Score = 58.0 bits (29), Expect = 5e-06 Identities = 47/53 (88%) Strand = Plus / Minus Query: 58 acaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 ||||| || ||||||||||||||||| |||||||| |||||||| || ||||| Sbjct: 909 acaaaatttgtggcaaaggcccacgcattgttgttaacggggtcagcaaggtg 857
>gb|AF034631.1|AF034631 Panax ginseng chlorophyll a/b binding protein of LHCII type I precursor (CAB) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1015 Score = 58.0 bits (29), Expect = 5e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 44 tttacttgccgggcacaaagttggtggcaaaggcccacgctttgttgtt 92 ||||||| ||||| ||||||||||||||| ||||||| || |||||||| Sbjct: 825 tttactttccggggacaaagttggtggcataggcccatgcattgttgtt 777
>gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein gene, complete cds Length = 1191 Score = 58.0 bits (29), Expect = 5e-06 Identities = 47/53 (88%) Strand = Plus / Minus Query: 52 ccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||||||| ||||||||||||| | |||||| ||||||||||| |||||||| Sbjct: 994 ccgggcacgaagttggtggcaatgagccacgcgttgttgttgacagggtcggc 942
>emb|Z75663.1|AGCHLABBP A.graveolens mRNA for chlorophyll a/b binding protein Length = 963 Score = 56.0 bits (28), Expect = 2e-05 Identities = 55/64 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||| ||||| |||||||| |||||||||||||| || |||||||| || ||||| || | Sbjct: 835 actttccgggaacaaagttagtggcaaaggcccaggcattgttgttaacagggtctgcaa 776 Query: 107 ggtg 110 |||| Sbjct: 775 ggtg 772
>gb|U39475.1|GMU39475 Glycine max chlorophyll a/b-binding protein (cab3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 977 Score = 56.0 bits (28), Expect = 2e-05 Identities = 55/64 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| ||||||| || ||||||||||| ||||| || | Sbjct: 821 acttgccggggacgaagttggtggcgtaggcccaggcattgttgttgactgggtccgcaa 762 Query: 107 ggtg 110 |||| Sbjct: 761 ggtg 758
>gb|U20983.1|STU20983 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-2) gene, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 56.0 bits (28), Expect = 2e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 52 ccgggcacaaagttggtggcaaaggcccacgctttgttgttgac 95 ||||| |||||||| |||||||||||||| || ||||||||||| Sbjct: 791 ccgggaacaaagtttgtggcaaaggcccatgcattgttgttgac 748
>gb|DQ252493.1| Solanum tuberosum clone 062G02 chlorophyll a-b binding protein 3C-like mRNA, complete cds Length = 1055 Score = 56.0 bits (28), Expect = 2e-05 Identities = 55/64 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||| ||||| |||||||| |||||||||||||| || |||||||| || ||||| || | Sbjct: 837 actttccgggaacaaagtttgtggcaaaggcccaagcgttgttgttaactgggtcagcaa 778 Query: 107 ggtg 110 |||| Sbjct: 777 ggtg 774
>dbj|D00571.1|PYPLHABBP Pyrus pyrifolia var. culta mRNA for light harvesting a/b binding protein, complete cds Length = 1055 Score = 54.0 bits (27), Expect = 8e-05 Identities = 51/59 (86%) Strand = Plus / Minus Query: 52 ccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 ||||| || ||||||||||| ||||||| || |||||||| ||||||||||| ||||| Sbjct: 892 ccggggacgaagttggtggcgtaggcccaggcattgttgttcacggggtcggccaggtg 834
>gb|U43707.1|PAU43707 Picea abies chlorophyll a/b binding protein of PS II mRNA, partial cds Length = 551 Score = 54.0 bits (27), Expect = 8e-05 Identities = 51/59 (86%) Strand = Plus / Minus Query: 52 ccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 ||||| || ||||||||||| | ||||| || |||||||||||||||||||| ||||| Sbjct: 389 ccggggacgaagttggtggcgtaagcccaggcgttgttgttgacggggtcggccaggtg 331
>gb|M15214.1|TOMCBPH Tomato chlorophyll a/b-binding protein gene Cab-3T, complete cds Length = 339 Score = 54.0 bits (27), Expect = 8e-05 Identities = 54/63 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||| ||||| |||||||| |||||||||||||| | |||||||| || |||||||| | Sbjct: 337 actttccgggaacaaagtttgtggcaaaggcccagacgttgttgttaactgggtcggcaa 278 Query: 107 ggt 109 ||| Sbjct: 277 ggt 275
>gb|M30622.1|TOMCBPF2 Tomato chlorophyll a/b-binding protein Cab-3B gene, 3' end Length = 351 Score = 54.0 bits (27), Expect = 8e-05 Identities = 48/55 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtc 101 |||| ||||| |||||||| |||||||||||||| || |||||||| || ||||| Sbjct: 349 actttccgggaacaaagtttgtggcaaaggcccaggcgttgttgttaactgggtc 295
>ref|NM_102733.2| Arabidopsis thaliana CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding AT1G29930 (CAB1) mRNA, complete cds Length = 1044 Score = 52.0 bits (26), Expect = 3e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgtt 92 |||| ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 868 actttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 823
>ref|NM_102731.2| Arabidopsis thaliana CAB3 (CHLOROPHYLL A/B BINDING PROTEIN 3); chlorophyll binding AT1G29910 (CAB3) mRNA, complete cds Length = 1020 Score = 52.0 bits (26), Expect = 3e-04 Identities = 50/58 (86%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| ||||||||||| || |||||||| || ||||||||||| || ||||| Sbjct: 855 actttccgggaacaaagttggttgcgaaggcccatgcgttgttgttgactggatcggc 798
>gb|DQ226787.1| Boechera divaricarpa isolate SLW-B-B06 mRNA sequence Length = 827 Score = 52.0 bits (26), Expect = 3e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgtt 92 |||| ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 630 actttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 585
>gb|AY091169.1| Arabidopsis thaliana putative chlorophyll a/b-binding protein (At1g29930) mRNA, complete cds Length = 835 Score = 52.0 bits (26), Expect = 3e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgtt 92 |||| ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 802 actttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 757
>gb|AY050935.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At1g29930) mRNA, complete cds Length = 1014 Score = 52.0 bits (26), Expect = 3e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgtt 92 |||| ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 868 actttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 823
>gb|AY114594.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29910) mRNA, complete cds Length = 870 Score = 52.0 bits (26), Expect = 3e-04 Identities = 50/58 (86%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| ||||||||||| || |||||||| || ||||||||||| || ||||| Sbjct: 802 actttccgggaacaaagttggttgcgaaggcccatgcgttgttgttgactggatcggc 745
>gb|AY065165.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29910; F1N18.5) mRNA, complete cds Length = 1019 Score = 52.0 bits (26), Expect = 3e-04 Identities = 50/58 (86%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| ||||||||||| || |||||||| || ||||||||||| || ||||| Sbjct: 855 actttccgggaacaaagttggttgcgaaggcccatgcgttgttgttgactggatcggc 798
>gb|AY058180.1| Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 1019 Score = 52.0 bits (26), Expect = 3e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgtt 92 |||| ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 868 actttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 823
>gb|AF428359.1|AF428359 Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 1045 Score = 52.0 bits (26), Expect = 3e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgtt 92 |||| ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 868 actttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 823
>gb|S73603.1| Pinus thunbergii chlorophyll a/b-binding protein (LHCPII) mRNA, complete cds Length = 998 Score = 52.0 bits (26), Expect = 3e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 49 ttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcgagg 108 |||||||| || ||||||||||| ||||||| || |||||||| |||||||| || ||| Sbjct: 860 ttgccggggacgaagttggtggcgtaggcccaggcgttgttgttaacggggtcagccagg 801 Query: 109 tg 110 || Sbjct: 800 tg 799
>gb|AY045673.1| Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 999 Score = 52.0 bits (26), Expect = 3e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgtt 92 |||| ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 868 actttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 823
>emb|BX814964.1|CNS0AE8Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZE02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 307 Score = 52.0 bits (26), Expect = 3e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgtt 92 |||| ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 172 actttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 127
>emb|BX815776.1|CNS0AE4K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZB12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 972 Score = 52.0 bits (26), Expect = 3e-04 Identities = 51/58 (87%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| |||||||||||||| |||||||| || ||||||||||| || ||||| Sbjct: 839 actttccgggaacaaagttggtggc-aaggcccaagcgttgttgttgactggatcggc 783
>emb|BX815726.1|CNS0ACD7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS89ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 930 Score = 52.0 bits (26), Expect = 3e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgtt 92 |||| ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 837 actttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 792
>emb|BX821952.1|CNS0AABH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 949 Score = 52.0 bits (26), Expect = 3e-04 Identities = 50/58 (86%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| |||||||| || |||||||| || |||||||| Sbjct: 828 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttaactgggtcggc 771
>gb|AC022455.5|AC022455 Arabidopsis thaliana chromosome 1 BAC T1P2 genomic sequence, complete sequence Length = 82053 Score = 52.0 bits (26), Expect = 3e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgtt 92 |||| ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 748 actttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 703
>emb|X03909.1|ATLHCP3 A.thaliana gene (LHCP AB 140) for chlorophyll a/b binding protein Length = 1109 Score = 52.0 bits (26), Expect = 3e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgtt 92 |||| ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 1019 actttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 974
>emb|X03908.1|ATLHCP2 A.thaliana gene (LHCP AB 180) for chlorophyll a/b binding protein Length = 1060 Score = 52.0 bits (26), Expect = 3e-04 Identities = 50/58 (86%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| ||||||||||| || |||||||| || ||||||||||| || ||||| Sbjct: 1008 actttccgggaacaaagttggttgcgaaggcccatgcgttgttgttgactggatcggc 951
>emb|X14794.1|ZMCAB1 Maize cab-1 gene for chlorophyll a/b-binding protein Length = 2100 Score = 52.0 bits (26), Expect = 3e-04 Identities = 50/58 (86%) Strand = Plus / Minus Query: 49 ttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||| || ||||||||||| ||||||| || ||||||||||| ||||| |||| Sbjct: 1676 ttgccggggacgaagttggtggcgtaggcccatgcgttgttgttgactgggtcagcga 1619
>emb|X14506.1|PSCABIIB Pinus sylvestris cab II/1B mRNA for chlorophyll a/b-binding protein Length = 1006 Score = 52.0 bits (26), Expect = 3e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 49 ttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcgagg 108 |||||||| || ||||||||||| ||||||| || |||||||| |||||||| || ||| Sbjct: 869 ttgccggggacgaagttggtggcgtaggcccaggcgttgttgttaacggggtcagccagg 810 Query: 109 tg 110 || Sbjct: 809 tg 808
>gb|AY104614.1| Zea mays PCO084486 mRNA sequence Length = 1214 Score = 52.0 bits (26), Expect = 3e-04 Identities = 26/26 (100%) Strand = Plus / Minus Query: 85 ttgttgttgacggggtcggcgaggtg 110 |||||||||||||||||||||||||| Sbjct: 953 ttgttgttgacggggtcggcgaggtg 928
>emb|X68333.1|HHLHC H.helix mRNA for light harvesting chlorophyll a/b binding protein Length = 686 Score = 52.0 bits (26), Expect = 3e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgtt 92 |||| ||||| ||||||||||||||| ||||||| || |||||||| Sbjct: 580 actttccggggacaaagttggtggcataggcccatgcattgttgtt 535
>gb|M64619.1|PEACAB66 Pea cab gene, complete cds Length = 1666 Score = 52.0 bits (26), Expect = 3e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 40 agtgtttacttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacgggg 99 |||||||| || ||||| ||||||||||||||| | | ||| || ||||||||||| ||| Sbjct: 1524 agtgtttattttccgggaacaaagttggtggcatatgaccatgcattgttgttgactggg 1465 Query: 100 tc 101 || Sbjct: 1464 tc 1463
>gb|K02067.1|PEACAB80 Pea (P.sativum) gene AB80 encoding major light-harvesting chlorophyll a/b-binding protein (polypeptide 15) complex precursor, complete coding sequence Length = 1993 Score = 52.0 bits (26), Expect = 3e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 40 agtgtttacttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacgggg 99 |||||||| || ||||| ||||||||||||||| | | ||| || ||||||||||| ||| Sbjct: 1825 agtgtttattttccgggaacaaagttggtggcatatgaccatgcattgttgttgactggg 1766 Query: 100 tc 101 || Sbjct: 1765 tc 1764
>gb|DQ226825.1| Boechera divaricarpa isolate SLW-B-H09 mRNA sequence Length = 775 Score = 50.1 bits (25), Expect = 0.001 Identities = 43/49 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgac 95 |||| ||||| || ||||||||||| |||||||| || ||||||||||| Sbjct: 630 actttccggggacgaagttggtggcgaaggcccatgcgttgttgttgac 582
>emb|X16436.1|SACAB Mustard cab gene for chlorophyll a/b-binding protein Length = 2774 Score = 50.1 bits (25), Expect = 0.001 Identities = 43/49 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgac 95 |||| ||||| || ||||||||||| |||||||| || ||||||||||| Sbjct: 2374 actttccggggacgaagttggtggcgaaggcccatgcgttgttgttgac 2326
>emb|BX821638.1|CNS0A92F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL5ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 911 Score = 50.1 bits (25), Expect = 0.001 Identities = 37/41 (90%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||||||| |||||||| || ||||||||||| |||||||| Sbjct: 814 ttggtggcgaaggcccaagcgttgttgttgactgggtcggc 774
>emb|X15894.1|SACAB1 Sinapsis alba cab-1 gene for chlorophyll a/b-binding polypeptide Length = 2775 Score = 50.1 bits (25), Expect = 0.001 Identities = 43/49 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgac 95 |||| ||||| || ||||||||||| |||||||| || ||||||||||| Sbjct: 2375 actttccggggacgaagttggtggcgaaggcccatgcgttgttgttgac 2327
>emb|X12981.1|GMCAB3 Soybean Cab3 gene for PSII LHCII chlorophyll a/b binding protein Length = 1361 Score = 50.1 bits (25), Expect = 0.001 Identities = 43/49 (87%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgac 95 |||| ||||| || |||||||||||| ||||||| || ||||||||||| Sbjct: 1040 actttccggggacgaagttggtggcataggcccaggcgttgttgttgac 992
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 48.1 bits (24), Expect = 0.005 Identities = 51/60 (85%) Strand = Plus / Plus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| | ||||| || |||||| |||||||||||||| Sbjct: 78974 acttgccggggacgaagttggtggcgtatgcccaggcgttgttggcgacggggtcggcga 79033
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.005 Identities = 51/60 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| | ||||| || |||||| |||||||||||||| Sbjct: 21808842 acttgccggggacgaagttggtggcgtatgcccaggcgttgttggcgacggggtcggcga 21808783
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.005 Identities = 51/60 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| | ||||| || |||||| |||||||||||||| Sbjct: 21801871 acttgccggggacgaagttggtggcgtatgcccaggcgttgttggcgacggggtcggcga 21801812
>gb|AF279250.1|AF279250 Vigna radiata LHCII type I chlorophyll a/b-binding protein (CipLhcb1*3) mRNA, complete cds; nuclear gene for chloroplast product Length = 941 Score = 48.1 bits (24), Expect = 0.005 Identities = 54/64 (84%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||| ||||| |||||||| |||||| | ||||| || ||||||||||| ||||| || | Sbjct: 848 actttccggggacaaagtttgtggcatatgcccaagcattgttgttgacagggtcagcaa 789 Query: 107 ggtg 110 |||| Sbjct: 788 ggtg 785
>gb|AF139467.2|AF139467 Vigna radiata LHCII type I chlorophyll a/b binding protein (CipLhcb1) mRNA, complete cds; nuclear gene for chloroplast product Length = 975 Score = 48.1 bits (24), Expect = 0.005 Identities = 54/64 (84%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||| ||||| || ||||||||||| ||||||| || ||||||||||| ||||| || | Sbjct: 848 actttccggggacgaagttggtggcgtaggcccaggcgttgttgttgactgggtcagcaa 789 Query: 107 ggtg 110 |||| Sbjct: 788 ggtg 785
>dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I09, full insert sequence Length = 1106 Score = 48.1 bits (24), Expect = 0.005 Identities = 51/60 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| | ||||| || |||||| |||||||||||||| Sbjct: 841 acttgccggggacgaagttggtggcgtatgcccaggcgttgttggcgacggggtcggcga 782
>dbj|AK058315.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A06, full insert sequence Length = 685 Score = 48.1 bits (24), Expect = 0.005 Identities = 51/60 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| | ||||| || |||||| |||||||||||||| Sbjct: 416 acttgccggggacgaagttggtggcgtatgcccaggcgttgttggcgacggggtcggcga 357
>gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 48.1 bits (24), Expect = 0.005 Identities = 51/60 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| || ||||||||||| | ||||| || |||||| |||||||||||||| Sbjct: 830 acttgccggggacgaagttggtggcgtatgcccaggcgttgttggcgacggggtcggcga 771
>gb|AF022739.1|AF022739 Oryza sativa chlorophyll a-b binding protein mRNA, complete cds Length = 1100 Score = 48.1 bits (24), Expect = 0.005 Identities = 51/60 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||||||||| ||||| |||||||| | ||||| || |||||| |||||||||||||| Sbjct: 837 acttgccggggacaaaattggtggcgtatgcccaggcgttgttggcgacggggtcggcga 778
>dbj|AP004473.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10J15, TM0007, complete sequence Length = 92741 Score = 48.1 bits (24), Expect = 0.005 Identities = 39/44 (88%) Strand = Plus / Plus Query: 58 acaaagttggtggcaaaggcccacgctttgttgttgacggggtc 101 ||||||||||||||| ||||||| || |||||||| || ||||| Sbjct: 65572 acaaagttggtggcataggcccaggcattgttgttaactgggtc 65615
>emb|X14341.1|SOCABP S.oleracea chloroplast mRNA for chlorophyll a/b binding protein Length = 980 Score = 48.1 bits (24), Expect = 0.005 Identities = 54/64 (84%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||| ||||| |||||||||||||||||| ||| || |||||||| || ||||| || | Sbjct: 851 actttccggggacaaagttggtggcaaagttccaagcattgttgttaaccgggtcagcaa 792 Query: 107 ggtg 110 |||| Sbjct: 791 ggtg 788
>gb|U01964.1|GMU01964 Glycine max cv. Dare photosystem II type I chlorophyll a/b-binding protein (lhcb1*7) gene, complete cds Length = 1882 Score = 48.1 bits (24), Expect = 0.005 Identities = 54/64 (84%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||| ||||| |||||||| |||||| | ||||| || ||||||||||| ||||| || | Sbjct: 1550 actttccgggaacaaagtttgtggcataagcccaagcattgttgttgactgggtcagcaa 1491 Query: 107 ggtg 110 |||| Sbjct: 1490 ggtg 1487
>emb|X74731.1|AHLHCB A.hypochondriacus Lhcb1*Ah1 mRNA Length = 699 Score = 46.1 bits (23), Expect = 0.020 Identities = 47/55 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtc 101 |||| ||||| ||||||||||| ||| ||||||| || |||||||| || ||||| Sbjct: 559 actttccgggtacaaagttggtagcataggcccaagcattgttgttaaccgggtc 505
>emb|X16647.1|RSCHABBP Radish mRNA for chlorophyll a/b binding protein of photosystem II Length = 518 Score = 46.1 bits (23), Expect = 0.020 Identities = 47/55 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtc 101 |||| ||||| || |||||||| || |||||||| || ||||||||||| ||||| Sbjct: 373 actttccggggacgaagttggtagcgaaggcccatgcgttgttgttgactgggtc 319
>emb|X14505.1|PSCABIIA Pinus sylvestris cab II/1A mRNA for chlorophyll a/b-binding protein Length = 1083 Score = 46.1 bits (23), Expect = 0.020 Identities = 41/47 (87%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| ||||||| || |||||||| ||||||||||| ||||| Sbjct: 873 ttggtggcgtaggcccaggcattgttgttcacggggtcggccaggtg 827
>gb|M16058.1|CUSLHCPB Cucumber LHCP mRNA encoding chlorophyll a/b-binding protein, partial cds Length = 748 Score = 46.1 bits (23), Expect = 0.020 Identities = 47/55 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtc 101 |||| ||||| |||||||| |||||| | ||||| || ||||||||||| ||||| Sbjct: 621 actttccgggaacaaagtttgtggcatatgcccaagcattgttgttgactgggtc 567
>dbj|AB013728.1| Cryptomeria japonica mRNA for light-harvesting chlorophyll a/b-binding protein of photosystem II, complete cds Length = 935 Score = 46.1 bits (23), Expect = 0.020 Identities = 47/55 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtc 101 |||| ||||| |||||||| |||||| | ||||| || ||||||||||| ||||| Sbjct: 810 acttcccgggaacaaagttagtggcataagcccaggcgttgttgttgacagggtc 756
>gb|AY288914.1| Brassica oleracea chlorophyll a/b binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1042 Score = 44.1 bits (22), Expect = 0.081 Identities = 40/46 (86%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgtt 92 |||| ||||| || |||||||| ||||||||||| || |||||||| Sbjct: 874 actttccgggaacgaagttggtagcaaaggcccatgcattgttgtt 829
>emb|BX821505.1|CNS0A93G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL46ZF04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 959 Score = 44.1 bits (22), Expect = 0.081 Identities = 49/58 (84%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggc 104 |||| ||||| || ||||||||||| ||||||| || ||||||| ||| |||||||| Sbjct: 838 actttccggggacgaagttggtggcggaggcccaagcgttgttgtagactgggtcggc 781
>gb|AY845253.1| Pisum sativum light-harvesting chlorophyll-a/b binding protein Lhcb1 mRNA, complete cds Length = 801 Score = 42.1 bits (21), Expect = 0.32 Identities = 48/57 (84%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcgg 103 |||| ||||| ||||||||||||||| | | ||| || |||||||| || ||||||| Sbjct: 799 actttccgggaacaaagttggtggcatatgaccatgcattgttgttaactgggtcgg 743
>ref|NM_128995.2| Arabidopsis thaliana LHB1B1; chlorophyll binding AT2G34430 (LHB1B1) mRNA, complete cds Length = 1008 Score = 42.1 bits (21), Expect = 0.32 Identities = 42/49 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgac 95 |||| ||||| || |||||||| || |||||||| || ||||||||||| Sbjct: 861 actttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 813
>gb|AC124343.3| Mus musculus BAC clone RP24-445C12 from chromosome 3, complete sequence Length = 139786 Score = 42.1 bits (21), Expect = 0.32 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 acatactcatgaaaactcgattttc 38 |||||||||||||||||| |||||| Sbjct: 99430 acatactcatgaaaactcaattttc 99406
>gb|AF339687.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34430) mRNA, complete cds Length = 851 Score = 42.1 bits (21), Expect = 0.32 Identities = 42/49 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgac 95 |||| ||||| || |||||||| || |||||||| || ||||||||||| Sbjct: 799 actttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 751
>gb|AF326864.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34430) mRNA, complete cds Length = 1019 Score = 42.1 bits (21), Expect = 0.32 Identities = 42/49 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgac 95 |||| ||||| || |||||||| || |||||||| || ||||||||||| Sbjct: 861 actttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 813
>gb|AY120776.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein. (At2g34430) mRNA, complete cds Length = 1003 Score = 42.1 bits (21), Expect = 0.32 Identities = 42/49 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgac 95 |||| ||||| || |||||||| || |||||||| || ||||||||||| Sbjct: 861 actttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 813
>gb|AF324693.2|AF324693 Arabidopsis thaliana At2g34430 (At2g34430/T31E10.23) mRNA, complete cds Length = 1009 Score = 42.1 bits (21), Expect = 0.32 Identities = 42/49 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgac 95 |||| ||||| || |||||||| || |||||||| || ||||||||||| Sbjct: 867 actttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 819
>emb|BX819881.1|CNS0AA6O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS41ZH03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 638 Score = 42.1 bits (21), Expect = 0.32 Identities = 42/49 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgac 95 |||| ||||| || |||||||| || |||||||| || ||||||||||| Sbjct: 519 actttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 471
>gb|AY086307.1| Arabidopsis thaliana clone 23727 mRNA, complete sequence Length = 979 Score = 42.1 bits (21), Expect = 0.32 Identities = 42/49 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgac 95 |||| ||||| || |||||||| || |||||||| || ||||||||||| Sbjct: 861 actttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 813
>emb|Y13865.1|BVCHLOROP Beta vulgaris mRNA for chlorophyll a/b-binding protein Length = 1036 Score = 42.1 bits (21), Expect = 0.32 Identities = 27/29 (93%) Strand = Plus / Minus Query: 61 aagttggtggcaaaggcccacgctttgtt 89 |||||||||||||||||||| || ||||| Sbjct: 857 aagttggtggcaaaggcccaggcattgtt 829
>emb|X56538.1|PSCABIIC P.sativum Cab-8 gene for photosystemm II chlorophyll a/b binding protein Length = 2236 Score = 42.1 bits (21), Expect = 0.32 Identities = 48/57 (84%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcgg 103 |||| ||||| ||||||||||||||| | | ||| || |||||||| || ||||||| Sbjct: 2115 actttccgggaacaaagttggtggcatatgaccatgcattgttgttaactgggtcgg 2059
>emb|X64459.1|ATLHB1B1 A.thaliana Lhb1B1 gene for photosystem II type I chlorophyll a/b binding protein Length = 1301 Score = 42.1 bits (21), Expect = 0.32 Identities = 42/49 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgac 95 |||| ||||| || |||||||| || |||||||| || ||||||||||| Sbjct: 1099 actttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 1051
>gb|BT002103.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein. (At2g34430) mRNA, complete cds Length = 853 Score = 42.1 bits (21), Expect = 0.32 Identities = 42/49 (85%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgac 95 |||| ||||| || |||||||| || |||||||| || ||||||||||| Sbjct: 799 actttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 751
>gb|J01253.1|PEACAB15 Pea major chlorophyll a/b-binding thylakoid protein (polypeptide 15) mRNA, clone pAB96 Length = 822 Score = 42.1 bits (21), Expect = 0.32 Identities = 54/65 (83%) Strand = Plus / Minus Query: 40 agtgtttacttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacgggg 99 |||||| |||| ||||| ||||||||||| ||| | | ||| || |||||||| || ||| Sbjct: 693 agtgttcactttccgggaacaaagttggtagcatatgaccatgcgttgttgttcactggg 634 Query: 100 tcggc 104 ||||| Sbjct: 633 tcggc 629
>gb|AY433957.1| Pyrus communis chlorophyll a/b-binding protein mRNA, partial sequence; nuclear gene for chloroplast product Length = 255 Score = 40.1 bits (20), Expect = 1.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttg 90 |||| |||||||| |||||||||||| | ||||| || |||||| Sbjct: 183 acttcccgggcacgaagttggtggcataagcccaggcattgttg 140
>emb|AL824704.27| Mouse DNA sequence from clone RP23-286H14 on chromosome 4, complete sequence Length = 205555 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 acacacatactcatgaaaac 29 |||||||||||||||||||| Sbjct: 73413 acacacatactcatgaaaac 73432
>emb|X52742.1|NTCAB50 Tabacco Cab50 mRNA for major chlorophyll a/b binding protein Length = 964 Score = 40.1 bits (20), Expect = 1.3 Identities = 53/64 (82%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcggcga 106 |||| ||||| |||||||||||||| ||| ||| || |||||||| || ||||| || | Sbjct: 869 actttccggggacaaagttggtggcgtaggaccaggcattgttgttaactgggtcagcaa 810 Query: 107 ggtg 110 |||| Sbjct: 809 ggtg 806
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gttgttgacggggtcggcga 106 |||||||||||||||||||| Sbjct: 357104 gttgttgacggggtcggcga 357085
>gb|M16057.1|CUSLHCPA Cucumber LHCP mRNA encoding chlorophyll a/b-binding protein, partial cds Length = 878 Score = 40.1 bits (20), Expect = 1.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 58 acaaagttggtggcaaaggcccacgctttgttgttgacggggtc 101 |||||||| || ||| ||||||| || ||||||||||| ||||| Sbjct: 755 acaaagtttgtagcataggcccaagcattgttgttgactgggtc 712
>ref|XM_478729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 38.2 bits (19), Expect = 5.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| || |||| || |||||| |||||||||||||||||| Sbjct: 816 ttggtggcgtagacccaggcgttgttggcgacggggtcggcgaggtg 770
>ref|XM_507374.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 995 Score = 38.2 bits (19), Expect = 5.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| || |||| || |||||| |||||||||||||||||| Sbjct: 840 ttggtggcgtagacccaggcgttgttggcgacggggtcggcgaggtg 794
>ref|XM_507373.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1007 Score = 38.2 bits (19), Expect = 5.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| || |||| || |||||| |||||||||||||||||| Sbjct: 840 ttggtggcgtagacccaggcgttgttggcgacggggtcggcgaggtg 794
>ref|XM_507372.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1108 Score = 38.2 bits (19), Expect = 5.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| || |||| || |||||| |||||||||||||||||| Sbjct: 842 ttggtggcgtagacccaggcgttgttggcgacggggtcggcgaggtg 796
>ref|XM_507371.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1000 Score = 38.2 bits (19), Expect = 5.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| || |||| || |||||| |||||||||||||||||| Sbjct: 845 ttggtggcgtagacccaggcgttgttggcgacggggtcggcgaggtg 799
>ref|XM_507370.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1012 Score = 38.2 bits (19), Expect = 5.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| || |||| || |||||| |||||||||||||||||| Sbjct: 845 ttggtggcgtagacccaggcgttgttggcgacggggtcggcgaggtg 799
>ref|XM_507369.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1032 Score = 38.2 bits (19), Expect = 5.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| || |||| || |||||| |||||||||||||||||| Sbjct: 847 ttggtggcgtagacccaggcgttgttggcgacggggtcggcgaggtg 801
>ref|XM_506410.2| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1159 Score = 38.2 bits (19), Expect = 5.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| || |||| || |||||| |||||||||||||||||| Sbjct: 880 ttggtggcgtagacccaggcgttgttggcgacggggtcggcgaggtg 834
>gb|AC145321.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094P07, complete sequence Length = 162311 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 86 tgttgttgacggggtcggcgagg 108 ||||| ||||||||||||||||| Sbjct: 120569 tgttgctgacggggtcggcgagg 120547 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 86 tgttgttgacggggtcggcgagg 108 ||||| ||||||||||||||||| Sbjct: 47924 tgttgctgacggggtcggcgagg 47902
>gb|AY389568.1| Hyacinthus orientalis unknown mRNA Length = 176 Score = 38.2 bits (19), Expect = 5.0 Identities = 25/27 (92%) Strand = Plus / Minus Query: 47 acttgccgggcacaaagttggtggcaa 73 ||||||| || |||||||||||||||| Sbjct: 27 acttgccagggacaaagttggtggcaa 1
>gb|AC145307.3| Mus musculus BAC clone RP24-400C6 from chromosome 17, complete sequence Length = 203180 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 gtacacacatactcatgaa 26 ||||||||||||||||||| Sbjct: 67258 gtacacacatactcatgaa 67276 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 gtacacacatactcatgaa 26 ||||||||||||||||||| Sbjct: 67162 gtacacacatactcatgaa 67180
>gb|AC124583.4| Mus musculus BAC clone RP23-123P18 from chromosome 17, complete sequence Length = 221980 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 gtacacacatactcatgaa 26 ||||||||||||||||||| Sbjct: 159379 gtacacacatactcatgaa 159397 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 gtacacacatactcatgaa 26 ||||||||||||||||||| Sbjct: 159283 gtacacacatactcatgaa 159301
>gb|AC123518.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0088N01, complete sequence Length = 123954 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 86 tgttgttgacggggtcggcgagg 108 ||||| ||||||||||||||||| Sbjct: 100740 tgttgctgacggggtcggcgagg 100718
>gb|AC102463.12| Mus musculus chromosome 1, clone RP24-328M5, complete sequence Length = 155111 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 gtacacacatactcatgaa 26 ||||||||||||||||||| Sbjct: 115036 gtacacacatactcatgaa 115054
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 86 tgttgttgacggggtcggcgagg 108 ||||| ||||||||||||||||| Sbjct: 4795947 tgttggtgacggggtcggcgagg 4795925 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 86 tgttgttgacggggtcggcgagg 108 ||||| ||||||||||||||||| Sbjct: 4774961 tgttggtgacggggtcggcgagg 4774939
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 86 tgttgttgacggggtcggcgagg 108 ||||| ||||||||||||||||| Sbjct: 5249475 tgttgctgacggggtcggcgagg 5249497 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 86 tgttgttgacggggtcggcgagg 108 ||||| ||||||||||||||||| Sbjct: 5176830 tgttgctgacggggtcggcgagg 5176852 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 86 tgttgttgacggggtcggcgagg 108 ||||| ||||||||||||||||| Sbjct: 248477 tgttggtgacggggtcggcgagg 248455
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 5.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| || |||| || |||||| |||||||||||||||||| Sbjct: 22434853 ttggtggcgtagacccaggcgttgttggcgacggggtcggcgaggtg 22434807
>emb|BX841915.1|CNS09Y31 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL40ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 907 Score = 38.2 bits (19), Expect = 5.0 Identities = 50/59 (84%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 47 acttgccgggcacaaagttggtggcaaaggccc-acgctttgttgttgacggggtcggc 104 |||| ||||| ||||||||||| || ||||||| | || ||||||||||| || ||||| Sbjct: 53 actttccgggaacaaagttggttgcgaaggccctatgcgttgttgttgactggatcggc 111
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 38.2 bits (19), Expect = 5.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| || |||| || |||||| |||||||||||||||||| Sbjct: 95920 ttggtggcgtagacccaggcgttgttggcgacggggtcggcgaggtg 95874
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 40 agtgtttacttgccgggca 58 ||||||||||||||||||| Sbjct: 2316063 agtgtttacttgccgggca 2316081
>dbj|AK109399.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C08, full insert sequence Length = 1111 Score = 38.2 bits (19), Expect = 5.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| || |||| || |||||| |||||||||||||||||| Sbjct: 845 ttggtggcgtagacccaggcgttgttggcgacggggtcggcgaggtg 799
>dbj|AK121578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033036K16, full insert sequence Length = 1861 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 86 tgttgttgacggggtcggcgagg 108 ||||| ||||||||||||||||| Sbjct: 367 tgttgctgacggggtcggcgagg 345
>dbj|AK119545.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G05, full insert sequence Length = 1012 Score = 38.2 bits (19), Expect = 5.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| || |||| || |||||| |||||||||||||||||| Sbjct: 845 ttggtggcgtagacccaggcgttgttggcgacggggtcggcgaggtg 799
>dbj|AK119533.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F03, full insert sequence Length = 1000 Score = 38.2 bits (19), Expect = 5.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| || |||| || |||||| |||||||||||||||||| Sbjct: 845 ttggtggcgtagacccaggcgttgttggcgacggggtcggcgaggtg 799
>dbj|AK111754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056F18, full insert sequence Length = 2791 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 86 tgttgttgacggggtcggcgagg 108 ||||| ||||||||||||||||| Sbjct: 459 tgttggtgacggggtcggcgagg 437
>dbj|AK104495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C03, full insert sequence Length = 973 Score = 38.2 bits (19), Expect = 5.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| || |||| || |||||| |||||||||||||||||| Sbjct: 816 ttggtggcgtagacccaggcgttgttggcgacggggtcggcgaggtg 770
>dbj|AK104465.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C07, full insert sequence Length = 1012 Score = 38.2 bits (19), Expect = 5.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| || |||| || |||||| |||||||||||||||||| Sbjct: 845 ttggtggcgtagacccaggcgttgttggcgacggggtcggcgaggtg 799
>dbj|AK104224.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E11, full insert sequence Length = 995 Score = 38.2 bits (19), Expect = 5.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| || |||| || |||||| |||||||||||||||||| Sbjct: 840 ttggtggcgtagacccaggcgttgttggcgacggggtcggcgaggtg 794
>dbj|AK103999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D10, full insert sequence Length = 1007 Score = 38.2 bits (19), Expect = 5.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| || |||| || |||||| |||||||||||||||||| Sbjct: 840 ttggtggcgtagacccaggcgttgttggcgacggggtcggcgaggtg 794
>dbj|AK103926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D02, full insert sequence Length = 1000 Score = 38.2 bits (19), Expect = 5.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| || |||| || |||||| |||||||||||||||||| Sbjct: 845 ttggtggcgtagacccaggcgttgttggcgacggggtcggcgaggtg 799
>dbj|AK072329.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039E06, full insert sequence Length = 2667 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 86 tgttgttgacggggtcggcgagg 108 ||||| ||||||||||||||||| Sbjct: 367 tgttgctgacggggtcggcgagg 345
>dbj|AK068972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G03, full insert sequence Length = 1107 Score = 38.2 bits (19), Expect = 5.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| || |||| || |||||| |||||||||||||||||| Sbjct: 841 ttggtggcgtagacccaggcgttgttggcgacggggtcggcgaggtg 795
>dbj|AK061512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G12, full insert sequence Length = 1032 Score = 38.2 bits (19), Expect = 5.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 64 ttggtggcaaaggcccacgctttgttgttgacggggtcggcgaggtg 110 |||||||| || |||| || |||||| |||||||||||||||||| Sbjct: 847 ttggtggcgtagacccaggcgttgttggcgacggggtcggcgaggtg 801
>gb|AF079590.1|AF079590 Sorghum bicolor photosystem II type II chlorophyll a/b binding protein (CABII) mRNA, partial cds Length = 714 Score = 38.2 bits (19), Expect = 5.0 Identities = 52/63 (82%) Strand = Plus / Minus Query: 44 tttacttgccgggcacaaagttggtggcaaaggcccacgctttgttgttgacggggtcgg 103 |||| |||||||| || ||||||||||| | ||||| || |||||| ||||||||| | Sbjct: 579 tttagttgccggggacgaagttggtggcgtaagcccaggcgttgttggcgacggggtcag 520 Query: 104 cga 106 ||| Sbjct: 519 cga 517
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 86 tgttgttgacggggtcggcgagg 108 ||||| ||||||||||||||||| Sbjct: 5315952 tgttgctgacggggtcggcgagg 5315974 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 86 tgttgttgacggggtcggcgagg 108 ||||| ||||||||||||||||| Sbjct: 5243307 tgttgctgacggggtcggcgagg 5243329 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 86 tgttgttgacggggtcggcgagg 108 ||||| ||||||||||||||||| Sbjct: 248477 tgttggtgacggggtcggcgagg 248455
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 86 tgttgttgacggggtcggcgagg 108 ||||| ||||||||||||||||| Sbjct: 4795928 tgttggtgacggggtcggcgagg 4795906 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 86 tgttgttgacggggtcggcgagg 108 ||||| ||||||||||||||||| Sbjct: 4774942 tgttggtgacggggtcggcgagg 4774920
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 86 tgttgttgacggggtcggcgagg 108 ||||| ||||||||||||||||| Sbjct: 56516 tgttggtgacggggtcggcgagg 56538
>emb|AL713946.3|CNS07YPP Oryza sativa chromosome 12, . BAC OJ1005_B07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161762 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 86 tgttgttgacggggtcggcgagg 108 ||||| ||||||||||||||||| Sbjct: 72170 tgttggtgacggggtcggcgagg 72192 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 86 tgttgttgacggggtcggcgagg 108 ||||| ||||||||||||||||| Sbjct: 51184 tgttggtgacggggtcggcgagg 51206
>gb|AC129222.4| Mus musculus BAC clone RP24-532L14 from 14, complete sequence Length = 181469 Score = 38.2 bits (19), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 6 gagtacacacatactcatgaaaa 28 |||||||||||||| |||||||| Sbjct: 104800 gagtacacacatacacatgaaaa 104822
>emb|AL672253.7| Mouse DNA sequence from clone RP23-13G19 on chromosome 2, complete sequence Length = 182150 Score = 38.2 bits (19), Expect = 5.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 cacatactcatgaaaactc 31 ||||||||||||||||||| Sbjct: 179339 cacatactcatgaaaactc 179357 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 867,527 Number of Sequences: 3902068 Number of extensions: 867527 Number of successful extensions: 62860 Number of sequences better than 10.0: 208 Number of HSP's better than 10.0 without gapping: 210 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 62304 Number of HSP's gapped (non-prelim): 556 length of query: 110 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 89 effective length of database: 17,151,101,840 effective search space: 1526448063760 effective search space used: 1526448063760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)