>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.020
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 38       caagaacatctgttgaaatgcat 60
                |||||||||||||||||||||||
Sbjct: 32164406 caagaacatctgttgaaatgcat 32164384

>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0403C05
          Length = 151085

 Score = 46.1 bits (23), Expect = 0.020
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 38    caagaacatctgttgaaatgcat 60
             |||||||||||||||||||||||
Sbjct: 35159 caagaacatctgttgaaatgcat 35137

>emb|CR388421.11| Zebrafish DNA sequence from clone CH211-73B10 in linkage group 20,
              complete sequence
          Length = 147762

 Score = 42.1 bits (21), Expect = 0.32
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 44     catctgttgaaatgcatctca 64
              |||||||||||||||||||||
Sbjct: 142076 catctgttgaaatgcatctca 142056

>gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone mte1-30k4, complete sequence
          Length = 172016

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      cttttgctttcatgatctca 24
              ||||||||||||||||||||
Sbjct: 108911 cttttgctttcatgatctca 108930

>emb|AL035667.12|HS805C22 Human DNA sequence from clone RP4-805C22 on chromosome 20q13.2-13.32
            Contains the 3' end of the gene for downstream of
            tyrosine kinase 5 (DOK5) protein, complete sequence
          Length = 135391

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 42   aacatctgttgaaatgcatc 61
            ||||||||||||||||||||
Sbjct: 4913 aacatctgttgaaatgcatc 4932

>gb|AC106872.5| Homo sapiens BAC clone RP11-366M4 from 4, complete sequence
          Length = 174535

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    aacatctgttgaaatgcatc 61
             ||||||||||||||||||||
Sbjct: 56410 aacatctgttgaaatgcatc 56391

>gb|AC023772.22| Homo sapiens chromosome 4, clone RP11-634F16, complete sequence
          Length = 191312

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     aacatctgttgaaatgcatc 61
              ||||||||||||||||||||
Sbjct: 176063 aacatctgttgaaatgcatc 176044

>ref|NM_033324.2| Mus musculus DiGeorge syndrome critical region gene 8 (Dgcr8), mRNA
          Length = 4226

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 44   catctgttgaaatgcatct 62
            |||||||||||||||||||
Sbjct: 3506 catctgttgaaatgcatct 3488

>gb|AC012526.35| Mus musculus strain 129S6/SvEvTac clone rp21-671i11 map 16, complete
             sequence
          Length = 186272

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    catctgttgaaatgcatct 62
             |||||||||||||||||||
Sbjct: 63242 catctgttgaaatgcatct 63260

>emb|AL163283.2|HS21C083 Homo sapiens chromosome 21 segment HS21C083
          Length = 340000

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 90    aactatgtacaaggagtgc 108
             |||||||||||||||||||
Sbjct: 17244 aactatgtacaaggagtgc 17262

>gb|AC149065.4| Mus musculus BAC clone RP23-121I6 from chromosome 7, complete sequence
          Length = 208092

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 5      cttttgctttcatgatctc 23
              |||||||||||||||||||
Sbjct: 208050 cttttgctttcatgatctc 208032

>emb|AL160287.18| Human DNA sequence from clone RP11-128B16 on chromosome 10p11.1-11.23
             Contains the 3' end of the APBB1IP gene for amyloid beta
             (A4) precursor protein-binding family B member 1
             interacting protein and two novel genes, complete sequence
          Length = 144666

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 17    tgatctcagcgagagcacg 35
             |||||||||||||||||||
Sbjct: 85619 tgatctcagcgagagcacg 85601

>emb|BX897743.8| Zebrafish DNA sequence from clone CH211-164N21 in linkage group 10,
             complete sequence
          Length = 112314

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 42    aacatctgttgaaatgcat 60
             |||||||||||||||||||
Sbjct: 35267 aacatctgttgaaatgcat 35285

>gb|AC091002.54| Mus musculus strain C57BL/6J clone rp23-7n16 map 16, complete sequence
          Length = 217939

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 44    catctgttgaaatgcatct 62
             |||||||||||||||||||
Sbjct: 76818 catctgttgaaatgcatct 76800

>gb|AC107462.5| Homo sapiens BAC clone RP11-338B9 from 4, complete sequence
          Length = 192173

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 37     tcaagaacatctgttgaaa 55
              |||||||||||||||||||
Sbjct: 167196 tcaagaacatctgttgaaa 167178

>gb|AC003060.1| Mus musculus Chromosome 16 BAC Clone 72k21 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 118235

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    catctgttgaaatgcatct 62
             |||||||||||||||||||
Sbjct: 20953 catctgttgaaatgcatct 20971

>gb|AC153651.4| Mus musculus BAC clone RP24-74B24 from chromosome 7, complete sequence
          Length = 256298

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 5      cttttgctttcatgatctc 23
              |||||||||||||||||||
Sbjct: 110877 cttttgctttcatgatctc 110895

>gb|AC084822.36| Mus musculus strain C57BL/6J clone rp23-47o21 map 16, complete sequence
          Length = 195335

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    catctgttgaaatgcatct 62
             |||||||||||||||||||
Sbjct: 54126 catctgttgaaatgcatct 54144

>dbj|AK080170.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
            enriched library, clone:A530075H22 product:HpaII tiny
            fragments locus 9c, full insert sequence
          Length = 3396

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 44   catctgttgaaatgcatct 62
            |||||||||||||||||||
Sbjct: 3307 catctgttgaaatgcatct 3325

>ref|NR_002813.1| Homo sapiens non-coding transcript UM9(5) (UM9(5))
          Length = 9848

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 37   tcaagaacatctgttgaaa 55
            |||||||||||||||||||
Sbjct: 4586 tcaagaacatctgttgaaa 4604

>dbj|AK086233.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
            library, clone:D930015E21 product:DGCRK6 PROTEIN homolog
            [Homo sapiens], full insert sequence
          Length = 4425

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 44   catctgttgaaatgcatct 62
            |||||||||||||||||||
Sbjct: 3698 catctgttgaaatgcatct 3680

>tpg|BK000166.1| TPA: TPA_exp: Homo sapiens UM 9(5)h non-coding transcript mRNA
            sequence
          Length = 9848

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 37   tcaagaacatctgttgaaa 55
            |||||||||||||||||||
Sbjct: 4586 tcaagaacatctgttgaaa 4604

>dbj|AB086857.1| Mus musculus DGCR8 gene, complete cds
          Length = 4226

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 44   catctgttgaaatgcatct 62
            |||||||||||||||||||
Sbjct: 3506 catctgttgaaatgcatct 3488

>gb|BC062919.1| Mus musculus DiGeorge syndrome critical region gene 8, mRNA (cDNA
            clone MGC:86132 IMAGE:6833280), complete cds
          Length = 4297

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 44   catctgttgaaatgcatct 62
            |||||||||||||||||||
Sbjct: 3526 catctgttgaaatgcatct 3508

>gb|BC066118.1| Mus musculus DiGeorge syndrome critical region gene 8, mRNA (cDNA
            clone MGC:66853 IMAGE:6400561), complete cds
          Length = 4031

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 44   catctgttgaaatgcatct 62
            |||||||||||||||||||
Sbjct: 3553 catctgttgaaatgcatct 3535

>gb|AC132449.4| Mus musculus BAC clone RP23-183J18 from 8, complete sequence
          Length = 206312

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 48     tgttgaaatgcatctcacc 66
              |||||||||||||||||||
Sbjct: 147571 tgttgaaatgcatctcacc 147589



 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 48     tgttgaaatgcatctcacc 66
              |||||||||||||||||||
Sbjct: 147475 tgttgaaatgcatctcacc 147493

>emb|AL844489.6| Mouse DNA sequence from clone RP23-101P8 on chromosome 2, complete
             sequence
          Length = 213549

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 29    gagcacgctcaagaacatctgtt 51
             |||||| ||||||||||||||||
Sbjct: 17591 gagcacactcaagaacatctgtt 17613

>gb|AF064863.3| Homo sapiens chromosome 21 clone RP1-111A18 map 21q22.2, complete
             sequence
          Length = 135332

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 90    aactatgtacaaggagtgc 108
             |||||||||||||||||||
Sbjct: 71041 aactatgtacaaggagtgc 71059


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 929,930
Number of Sequences: 3902068
Number of extensions: 929930
Number of successful extensions: 71204
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71133
Number of HSP's gapped (non-prelim): 71
length of query: 110
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 89
effective length of database: 17,151,101,840
effective search space: 1526448063760
effective search space used: 1526448063760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)