ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet37b01 |
|---|---|
| Clone Library Name | barley_pub |
>PSAD_HORVU (P36213) Photosystem I reaction center subunit II, chloroplast| precursor (Photosystem I 20 kDa subunit) (PSI-D) Length = 205 Score = 165 bits (418), Expect = 3e-41 Identities = 79/79 (100%), Positives = 79/79 (100%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSI 236 ARKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSI Sbjct: 127 ARKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSI 186 Query: 235 GKNVSPIEVKFTGKNSFDI 179 GKNVSPIEVKFTGKNSFDI Sbjct: 187 GKNVSPIEVKFTGKNSFDI 205
>PSAD_CUCSA (P32869) Photosystem I reaction center subunit II, chloroplast| precursor (Photosystem I 20 kDa subunit) (PSI-D) (PS I subunit 5) Length = 207 Score = 151 bits (382), Expect = 5e-37 Identities = 71/79 (89%), Positives = 74/79 (93%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSI 236 ARKEQCLALG RLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEKVN GR+GVGQNFRSI Sbjct: 129 ARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSI 188 Query: 235 GKNVSPIEVKFTGKNSFDI 179 GKNVSPIEVKFTGK +D+ Sbjct: 189 GKNVSPIEVKFTGKQVYDL 207
>PSAD_NICSY (P29302) Photosystem I reaction center subunit II, chloroplast| precursor (Photosystem I 20 kDa subunit) (PSI-D) Length = 204 Score = 150 bits (379), Expect = 1e-36 Identities = 71/79 (89%), Positives = 74/79 (93%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSI 236 ARKEQCLALG RLRSKYKI Y+FYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSI Sbjct: 126 ARKEQCLALGTRLRSKYKINYRFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSI 185 Query: 235 GKNVSPIEVKFTGKNSFDI 179 GKN SPIEVKFTGK +D+ Sbjct: 186 GKNKSPIEVKFTGKQVYDL 204
>PSAD1_ARATH (Q9S7H1) Photosystem I reaction center subunit II-1, chloroplast| precursor (Photosystem I 20 kDa subunit 1) (PSI-D1) Length = 208 Score = 147 bits (372), Expect = 7e-36 Identities = 69/79 (87%), Positives = 72/79 (91%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSI 236 ARKEQCLALG RLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEK N GR+GVG N RSI Sbjct: 130 ARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKANPGREGVGLNMRSI 189 Query: 235 GKNVSPIEVKFTGKNSFDI 179 GKNVSPIEVKFTGK S+D+ Sbjct: 190 GKNVSPIEVKFTGKQSYDL 208
>PSAD2_ARATH (Q9SA56) Photosystem I reaction center subunit II-2, chloroplast| precursor (Photosystem I 20 kDa subunit 2) (PSI-D2) Length = 204 Score = 147 bits (372), Expect = 7e-36 Identities = 69/79 (87%), Positives = 72/79 (91%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSI 236 ARKEQCLALG RLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEK N GR+GVG N RSI Sbjct: 126 ARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKANPGREGVGLNMRSI 185 Query: 235 GKNVSPIEVKFTGKNSFDI 179 GKNVSPIEVKFTGK S+D+ Sbjct: 186 GKNVSPIEVKFTGKQSYDL 204
>PSAD_LYCES (P12372) Photosystem I reaction center subunit II, chloroplast| precursor (Photosystem I 20 kDa subunit) (PSI-D) Length = 208 Score = 146 bits (369), Expect = 2e-35 Identities = 70/79 (88%), Positives = 72/79 (91%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSI 236 ARKEQCLALG RLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEKVN GR+GVGQNFRSI Sbjct: 130 ARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSI 189 Query: 235 GKNVSPIEVKFTGKNSFDI 179 GKN S IEVKFTGK +DI Sbjct: 190 GKNKSAIEVKFTGKQVYDI 208
>PSAD_SPIOL (P12353) Photosystem I reaction center subunit II, chloroplast| precursor (Photosystem I 20 kDa subunit) (PSI-D) Length = 212 Score = 146 bits (368), Expect = 2e-35 Identities = 69/79 (87%), Positives = 72/79 (91%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSI 236 ARKEQCLALG RLRSKYKI YQFYRVFP+GEVQYLHPKDGVYPEKVN GRQGVG N RSI Sbjct: 134 ARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVNPGRQGVGLNMRSI 193 Query: 235 GKNVSPIEVKFTGKNSFDI 179 GKNVSPIEVKFTGK +D+ Sbjct: 194 GKNVSPIEVKFTGKQPYDL 212
>PSAD_PORPU (P51279) Photosystem I reaction center subunit II (Photosystem I 16| kDa polypeptide) (PSI-D) Length = 141 Score = 114 bits (286), Expect = 7e-26 Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 1/79 (1%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKIA-YQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRS 239 A+KEQCLALG +L+ K+KI+ Y+ YRVFPNGEVQYLHPKDGV+PEKVNAGR + S Sbjct: 63 AKKEQCLALGTQLKGKFKISDYKIYRVFPNGEVQYLHPKDGVFPEKVNAGRASINSVDHS 122 Query: 238 IGKNVSPIEVKFTGKNSFD 182 IGKNV+PI VKFT K ++D Sbjct: 123 IGKNVNPINVKFTNKATYD 141
>PSAD_CHLRE (Q39615) Photosystem I reaction center subunit II, chloroplast| precursor (Photosystem I 20 kDa subunit) (PSI-D) Length = 196 Score = 110 bits (275), Expect = 1e-24 Identities = 50/73 (68%), Positives = 62/73 (84%) Frame = -1 Query: 412 RKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSIG 233 +KEQCLAL +LR+K+K+ FYRVFP+G+VQYLHP DGVYPEKVNAGR G QN R IG Sbjct: 117 KKEQCLALTTQLRNKFKLTPCFYRVFPDGKVQYLHPADGVYPEKVNAGRVGANQNMRRIG 176 Query: 232 KNVSPIEVKFTGK 194 +NV+PI+VKF+G+ Sbjct: 177 QNVNPIKVKFSGR 189
>PSAD_GUITH (O78502) Photosystem I reaction center subunit II (Photosystem I 16| kDa polypeptide) (PSI-D) Length = 141 Score = 108 bits (270), Expect = 5e-24 Identities = 50/79 (63%), Positives = 64/79 (81%), Gaps = 1/79 (1%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKIA-YQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRS 239 ARKEQCLALG ++++ +KI Y+ YR+FP+GEVQYLHPKDGV+PEKVN GR GVG S Sbjct: 63 ARKEQCLALGTQVKTSFKITDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRIGVGNVSHS 122 Query: 238 IGKNVSPIEVKFTGKNSFD 182 IGKN++P ++KFT K+ D Sbjct: 123 IGKNLNPAQIKFTNKSFCD 141
>PSAD_CYAPA (Q9T4W8) Photosystem I reaction center subunit II, cyanelle| precursor (Photosystem I 20 kDa subunit) (PSI-D) Length = 220 Score = 106 bits (265), Expect = 2e-23 Identities = 49/79 (62%), Positives = 63/79 (79%), Gaps = 1/79 (1%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKIA-YQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRS 239 ARKEQC+ALG +L+ K+KI Y+ YRV+P+GEVQ+LHPKDGV+PEKVN GR VG N R Sbjct: 137 ARKEQCIALGAQLKDKFKITDYKIYRVYPSGEVQFLHPKDGVFPEKVNPGRVAVGSNKRR 196 Query: 238 IGKNVSPIEVKFTGKNSFD 182 IG+N P ++KF G+ +FD Sbjct: 197 IGQNPDPAKLKFKGQETFD 215
>PSAD_CYACA (Q9TLR2) Photosystem I reaction center subunit II (Photosystem I 16| kDa polypeptide) (PSI-D) Length = 140 Score = 106 bits (265), Expect = 2e-23 Identities = 49/78 (62%), Positives = 64/78 (82%), Gaps = 1/78 (1%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKIA-YQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRS 239 A+KEQCLALGN+L+ K+KI ++ YR+FPNGE Q+LHPKDGV+PEKVN GR+ +G+ + Sbjct: 63 AKKEQCLALGNQLKIKFKILNFKIYRIFPNGEAQFLHPKDGVFPEKVNEGRKPIGKIDHN 122 Query: 238 IGKNVSPIEVKFTGKNSF 185 IGKN++P EVKFT K F Sbjct: 123 IGKNLNPAEVKFTHKTIF 140
>PSAD_SYNY3 (P19569) Photosystem I reaction center subunit II (Photosystem I 16| kDa polypeptide) (PSI-D) Length = 140 Score = 102 bits (255), Expect = 3e-22 Identities = 47/82 (57%), Positives = 62/82 (75%), Gaps = 3/82 (3%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKIA---YQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNF 245 ARKEQCLALG +LR+K+K Y+ YRV+P+GEVQYLHP DGV+PEKVN GR+ G Sbjct: 59 ARKEQCLALGTQLRTKFKPKIQDYKIYRVYPSGEVQYLHPADGVFPEKVNEGREAQGTKT 118 Query: 244 RSIGKNVSPIEVKFTGKNSFDI 179 R IG+N P+ +KF+GK +++ Sbjct: 119 RRIGQNPEPVTIKFSGKAPYEV 140
>PSAD_ODOSI (P49481) Photosystem I reaction center subunit II (Photosystem I 16| kDa polypeptide) (PSI-D) Length = 139 Score = 98.6 bits (244), Expect = 5e-21 Identities = 46/78 (58%), Positives = 58/78 (74%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSI 236 ARKEQCLALG +LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVN GR V SI Sbjct: 61 ARKEQCLALGTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSI 120 Query: 235 GKNVSPIEVKFTGKNSFD 182 GKN +P +KF+G +++ Sbjct: 121 GKNPNPASIKFSGITTYE 138
>PSAD_SKECO (O96800) Photosystem I reaction center subunit II (Photosystem I 16| kDa polypeptide) (PSI-D) Length = 139 Score = 96.3 bits (238), Expect = 2e-20 Identities = 45/78 (57%), Positives = 57/78 (73%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSI 236 ARKEQCLAL +LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVN GR V SI Sbjct: 61 ARKEQCLALSTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSI 120 Query: 235 GKNVSPIEVKFTGKNSFD 182 GKN +P +KF+G +++ Sbjct: 121 GKNPNPASIKFSGITTYE 138
>PSAD_MASLA (O07115) Photosystem I reaction center subunit II (Photosystem I 16| kDa polypeptide) (PSI-D) Length = 142 Score = 95.1 bits (235), Expect = 6e-20 Identities = 43/78 (55%), Positives = 57/78 (73%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSI 236 ARKEQC+ALG++LR Y+ YR++PNGE Y+HP DGV+PEKVN GRQ V N R I Sbjct: 61 ARKEQCIALGSQLRRLKITDYKIYRIYPNGETAYIHPADGVFPEKVNPGRQKVRYNDRRI 120 Query: 235 GKNVSPIEVKFTGKNSFD 182 G+N P ++KF+G ++D Sbjct: 121 GQNPDPAKLKFSGVATYD 138
>PSAD_SYNP6 (P23076) Photosystem I reaction center subunit II (Photosystem I 16| kDa polypeptide) (PSI-D) Length = 141 Score = 92.4 bits (228), Expect = 4e-19 Identities = 45/80 (56%), Positives = 57/80 (71%), Gaps = 3/80 (3%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKI---AYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNF 245 ARKEQ LALG +LR+K+K +Y+ YR FP +V YLHPKDGV+PEKVN GR G+ Sbjct: 60 ARKEQALALGTQLRTKFKPKIESYKIYRFFPGADVGYLHPKDGVFPEKVNEGRSFAGKVD 119 Query: 244 RSIGKNVSPIEVKFTGKNSF 185 R IG+N +P +KFTGK + Sbjct: 120 RRIGQNPNPATIKFTGKQPY 139
>PSAD_ANASP (P58573) Photosystem I reaction center subunit II| Length = 139 Score = 91.3 bits (225), Expect = 8e-19 Identities = 45/79 (56%), Positives = 61/79 (77%), Gaps = 1/79 (1%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKIA-YQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRS 239 ARKE +ALG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVNAGR+ V N RS Sbjct: 61 ARKEYGIALGGQLR-KFKITNYKIYRILPSGETTFIHPADGVFPEKVNAGREKVRFNARS 119 Query: 238 IGKNVSPIEVKFTGKNSFD 182 IG+N +P +VKF+GK ++D Sbjct: 120 IGENPNPSQVKFSGKATYD 138
>PSAD_SYNVU (P0A422) Photosystem I reaction center subunit II (Photosystem I 16| kDa polypeptide) (PSI-D) Length = 138 Score = 90.9 bits (224), Expect = 1e-18 Identities = 44/79 (55%), Positives = 57/79 (72%), Gaps = 1/79 (1%) Frame = -1 Query: 415 ARKEQCLALG-NRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRS 239 ARKEQCLAL +LR + Y+ YR+FP+GE +HPKDGV+PEKVN GR+ V RS Sbjct: 59 ARKEQCLALAAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRS 118 Query: 238 IGKNVSPIEVKFTGKNSFD 182 IG+N +P ++KFTGK +D Sbjct: 119 IGQNPNPSQLKFTGKKPYD 137
>PSAD_SYNEN (P0A421) Photosystem I reaction center subunit II (Photosystem I 16| kDa polypeptide) (PSI-D) Length = 138 Score = 90.9 bits (224), Expect = 1e-18 Identities = 44/79 (55%), Positives = 57/79 (72%), Gaps = 1/79 (1%) Frame = -1 Query: 415 ARKEQCLALG-NRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRS 239 ARKEQCLAL +LR + Y+ YR+FP+GE +HPKDGV+PEKVN GR+ V RS Sbjct: 59 ARKEQCLALAAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRS 118 Query: 238 IGKNVSPIEVKFTGKNSFD 182 IG+N +P ++KFTGK +D Sbjct: 119 IGQNPNPSQLKFTGKKPYD 137
>PSAD_SYNEL (P0A420) Photosystem I reaction center subunit II (Photosystem I 16| kDa polypeptide) (PSI-D) Length = 138 Score = 90.9 bits (224), Expect = 1e-18 Identities = 44/79 (55%), Positives = 57/79 (72%), Gaps = 1/79 (1%) Frame = -1 Query: 415 ARKEQCLALG-NRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRS 239 ARKEQCLAL +LR + Y+ YR+FP+GE +HPKDGV+PEKVN GR+ V RS Sbjct: 59 ARKEQCLALAAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRS 118 Query: 238 IGKNVSPIEVKFTGKNSFD 182 IG+N +P ++KFTGK +D Sbjct: 119 IGQNPNPSQLKFTGKKPYD 137
>PSAD_NOSS8 (P56596) Photosystem I reaction center subunit II (Photosystem I 16| kDa polypeptide) (PSI-D) Length = 138 Score = 90.1 bits (222), Expect = 2e-18 Identities = 45/79 (56%), Positives = 60/79 (75%), Gaps = 1/79 (1%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKIA-YQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRS 239 ARKEQ +ALG +LR K+KI Y+ YR+FPNGE ++HP DGV+PEKVN GR+ V R Sbjct: 60 ARKEQGIALGGQLR-KFKITDYKIYRIFPNGETTFIHPADGVFPEKVNEGREKVRFVPRR 118 Query: 238 IGKNVSPIEVKFTGKNSFD 182 IG+N SP ++KF+GK ++D Sbjct: 119 IGQNPSPAQLKFSGKYTYD 137
>PSAD_ANAVT (P31089) Photosystem I reaction center subunit II (Photosystem I 16| kDa polypeptide) (PSI-D) Length = 138 Score = 89.4 bits (220), Expect = 3e-18 Identities = 44/79 (55%), Positives = 60/79 (75%), Gaps = 1/79 (1%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKIA-YQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRS 239 ARKE +ALG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVN GR+ V N RS Sbjct: 60 ARKEYGIALGGQLR-KFKITNYKIYRILPSGETTFIHPADGVFPEKVNPGREKVRFNARS 118 Query: 238 IGKNVSPIEVKFTGKNSFD 182 IG+N +P +VKF+GK ++D Sbjct: 119 IGENPNPSQVKFSGKATYD 137
>PSAD_FREDI (P23808) Photosystem I reaction center subunit II (Photosystem I 16| kDa polypeptide) (PSI-D) Length = 138 Score = 81.6 bits (200), Expect = 6e-16 Identities = 42/79 (53%), Positives = 56/79 (70%), Gaps = 1/79 (1%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKIA-YQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRS 239 ARKE +ALG +LR K+KI Y+ YR+ P GE +HP DGV+PEKVNAGR+ V R Sbjct: 60 ARKEYGIALGGQLR-KFKITDYKIYRILPGGETTLIHPADGVFPEKVNAGREKVRFVPRR 118 Query: 238 IGKNVSPIEVKFTGKNSFD 182 IG+N +P +KF+GK ++D Sbjct: 119 IGENPNPSAIKFSGKYTYD 137
>PSAD_GLOVI (Q7NF26) Photosystem I reaction center subunit II| Length = 144 Score = 81.3 bits (199), Expect = 8e-16 Identities = 43/80 (53%), Positives = 54/80 (67%), Gaps = 1/80 (1%) Frame = -1 Query: 415 ARKEQCLALGNRLRSKYKIA-YQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRS 239 ARKEQC AL +L S +KI + YRV+PNGE + P DGV EK N GR+ VG R Sbjct: 65 ARKEQCHALHRQLVSTFKIRDSKIYRVYPNGEQVLIFPMDGVPSEKSNPGREVVGYVPRK 124 Query: 238 IGKNVSPIEVKFTGKNSFDI 179 IG N +P++VKFTGK +FD+ Sbjct: 125 IGDNPNPVDVKFTGKETFDV 144
>UMP1_ARATH (Q9LKA5) Unknown mitochondrial protein At3g15000| Length = 395 Score = 32.0 bits (71), Expect = 0.58 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = -3 Query: 323 GAVPPPQ-GRRLPGEGQRRQAGRGTELPQHRQERQPHR 213 GAVPPPQ G P +Q G G + PQ++ P+R Sbjct: 349 GAVPPPQYGGAPPQNNNYQQQGSGMQQPQYQNNYPPNR 386
>CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2339 Score = 31.2 bits (69), Expect = 0.99 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 5/48 (10%) Frame = -3 Query: 320 AVPPPQGR----RLPG-EGQRRQAGRGTELPQHRQERQPHRGQVHRQE 192 A PP+ R R PG EG RR RG+ P+ ER+P R + HR + Sbjct: 896 AAGPPEARSERGRGPGPEGGRRHHRRGS--PEEAAEREPRRHRAHRHQ 941
>FANCM_HUMAN (Q8IYD8) Fanconi anemia group M protein (EC 3.6.1.-) (ATP-dependent| RNA helicase FANCM) (Protein FACM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog) Length = 2048 Score = 30.0 bits (66), Expect = 2.2 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = -1 Query: 361 IAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVG 254 + Y FYR FP+G+V ++ P + +++ A Q +G Sbjct: 124 VMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMG 159
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 29.6 bits (65), Expect = 2.9 Identities = 14/36 (38%), Positives = 16/36 (44%) Frame = +3 Query: 3 SNYHVHIT*CNHYHRIHHSNSTILKLQDVHHHRHPP 110 S YH H+H HH + Q HHH HPP Sbjct: 994 SLYHSAALPPAHHHPPHHHHHHAPPPQPHHHHAHPP 1029
>KCNK9_XENLA (Q63ZI0) Potassium channel subfamily K member 9| Length = 374 Score = 29.6 bits (65), Expect = 2.9 Identities = 16/62 (25%), Positives = 29/62 (46%) Frame = -3 Query: 305 QGRRLPGEGQRRQAGRGTELPQHRQERQPHRGQVHRQELLRHLISLVRRICACLCVRASS 126 + R E + AG + H QE PH Q ++ E ++ ++ +C+C+C R+ Sbjct: 252 EDERRDAEERASLAGNRNSMIIHIQEDTPHGRQRYKAE-----VTDLQSVCSCMCYRSHE 306 Query: 125 ST 120 T Sbjct: 307 YT 308
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 29.3 bits (64), Expect = 3.7 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +3 Query: 36 HYHRIHHSNSTILKLQDVHHHRHPP 110 H+H HH + Q HHH HPP Sbjct: 997 HHHPPHHHHHHAPPPQPHHHHAHPP 1021
>ANTP_DROSU (Q24645) Homeotic protein antennapedia| Length = 394 Score = 29.3 bits (64), Expect = 3.7 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = -3 Query: 308 PQGRRLPGEGQRRQAGRGTELPQHRQERQPHRGQVHRQEL 189 P G +L + Q++Q + ++ PQ +Q +QP + Q Q+L Sbjct: 107 PTGGQLVAQQQQQQPQQQSQTPQQQQAQQPQQQQQQLQQL 146
>GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 precursor| Length = 839 Score = 28.9 bits (63), Expect = 4.9 Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%) Frame = -3 Query: 311 PPQGRRLPGEGQR-RQAGRGTELPQHRQERQPHRGQ 207 P QG++ PG+GQ+ +Q G+G + Q Q +QP +GQ Sbjct: 324 PAQGQQ-PGQGQQGQQPGQGQQGQQPGQGQQPGQGQ 358 Score = 28.5 bits (62), Expect = 6.4 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = -3 Query: 308 PQGRRLPGEGQR-RQAGRGTELPQHRQERQPHRGQ 207 P + PG+GQ+ +Q G+G + Q Q +QP +GQ Sbjct: 384 PTQSQQPGQGQQGQQVGQGQQAQQPGQGQQPGQGQ 418
>GLT4_WHEAT (P08489) Glutenin, high molecular weight subunit PW212 precursor| Length = 838 Score = 28.9 bits (63), Expect = 4.9 Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 3/38 (7%) Frame = -3 Query: 311 PPQGRR--LPGEGQR-RQAGRGTELPQHRQERQPHRGQ 207 P QG++ PG+GQ+ +Q G+G + Q +Q +QP +GQ Sbjct: 224 PAQGQQGQQPGQGQQGQQPGQGQQPGQGQQGQQPGQGQ 261 Score = 28.5 bits (62), Expect = 6.4 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = -3 Query: 308 PQGRRLPGEGQR-RQAGRGTELPQHRQERQPHRGQ 207 P + PG+GQ+ +Q G+G + Q Q +QP +GQ Sbjct: 389 PTQSQQPGQGQQGQQVGQGQQAQQPGQGQQPGQGQ 423 Score = 28.5 bits (62), Expect = 6.4 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = -3 Query: 311 PPQGRRLPGEGQRRQAGRGTELPQHRQERQPHRGQVHRQ 195 P QG++ GQ +Q G+G + Q Q +QP +GQ +Q Sbjct: 233 PGQGQQGQQPGQGQQPGQGQQGQQPGQGQQPGQGQQGQQ 271
>FOXB2_MOUSE (Q64733) Forkhead box protein B2 (Transcription factor FKH-4)| Length = 428 Score = 28.9 bits (63), Expect = 4.9 Identities = 12/34 (35%), Positives = 15/34 (44%) Frame = +3 Query: 9 YHVHIT*CNHYHRIHHSNSTILKLQDVHHHRHPP 110 +H H +H+H HH HHH HPP Sbjct: 142 HHAHHHHHHHHHAAHH-----------HHHHHPP 164
>GLT3_WHEAT (P08488) Glutenin, high molecular weight subunit 12 precursor| Length = 660 Score = 28.5 bits (62), Expect = 6.4 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 3/36 (8%) Frame = -3 Query: 305 QGRRLPGEGQRRQAGRGTEL---PQHRQERQPHRGQ 207 QG+++ GQ++Q G+G + Q QE+QP +GQ Sbjct: 389 QGQQIGQPGQKQQPGQGQQTGQGQQPEQEQQPGQGQ 424
>URB1_USTMA (P40349) Siderophore biosynthesis regulatory protein URBS1| Length = 950 Score = 28.5 bits (62), Expect = 6.4 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Frame = +3 Query: 33 NHYHRIHHSNSTILKL-QDVHHHRHPPIT 116 +H+H HH+N + HHH H P+T Sbjct: 755 HHHHHHHHANHASHAVHHGHHHHHHHPVT 783
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 28.5 bits (62), Expect = 6.4 Identities = 11/33 (33%), Positives = 15/33 (45%) Frame = +3 Query: 6 NYHVHIT*CNHYHRIHHSNSTILKLQDVHHHRH 104 ++H H +H+H HH D HHH H Sbjct: 286 HHHHHHHDAHHHHHHHHDAHHHHHHHDAHHHHH 318
>DYRK2_DROME (Q9V3D5) Dual specificity tyrosine-phosphorylation-regulated kinase| 2 (EC 2.7.12.1) (dDyrk2) (Protein smell impaired at 35A) Length = 722 Score = 28.1 bits (61), Expect = 8.3 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +3 Query: 33 NHYHRIHHSNSTILKLQDVHHHRH 104 NH++ HH+ ST HHH H Sbjct: 663 NHHNVTHHNASTATIATTTHHHHH 686
>RPTN_MOUSE (P97347) Repetin| Length = 1130 Score = 28.1 bits (61), Expect = 8.3 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%) Frame = -3 Query: 278 QRRQAGRGTELP----QHRQERQPHRGQVHRQELLRH 180 Q+ Q GR + P + RQ++ PHRGQ RQ+ H Sbjct: 330 QQGQKGRKDQSPHLGQKGRQDQSPHRGQKGRQDQSPH 366 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,089,738 Number of Sequences: 219361 Number of extensions: 848663 Number of successful extensions: 2923 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 2660 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2883 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
