ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet37a09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1DAAM2_HUMAN (Q86T65) Disheveled-associated activator of morphoge... 34 0.19
2YG3A_YEAST (P53278) Hypothetical 92.7 kDa protein in ASN2-PHB1 i... 32 0.71
3Y1670_BACHD (Q9KCA3) UPF0302 protein BH1670 32 0.93
4TPM1_YEAST (P17536) Tropomyosin 1 32 0.93
5ACTN1_RAT (Q9Z1P2) Alpha-actinin-1 (Alpha-actinin cytoskeletal i... 31 1.2
6ACTN1_HUMAN (P12814) Alpha-actinin-1 (Alpha-actinin cytoskeletal... 31 1.2
7PDE6A_MOUSE (P27664) Rod cGMP-specific 3',5'-cyclic phosphodiest... 31 1.2
8ACTN1_CHICK (P05094) Alpha-actinin-1 (Alpha-actinin cytoskeletal... 31 1.2
9IF2_AGRT5 (Q8UJ51) Translation initiation factor IF-2 31 1.6
10UACA_HUMAN (Q9BZF9) Uveal autoantigen with coiled-coil domains a... 31 1.6
11HAPIP_RAT (P97924) Huntingtin-associated protein-interacting pro... 30 2.1
12NONA_DROME (Q04047) Protein no-on-transient A (Puff-specific pro... 30 2.1
13HAPIP_HUMAN (O60229) Huntingtin-associated protein-interacting p... 30 2.1
14MYS_AEQIR (P24733) Myosin heavy chain, striated muscle 30 2.7
15ACTN4_HUMAN (O43707) Alpha-actinin-4 (Non-muscle alpha-actinin 4... 30 2.7
16ACTN4_CHICK (Q90734) Alpha-actinin-4 (Non-muscle alpha-actinin 4... 30 2.7
17ACTN4_MOUSE (P57780) Alpha-actinin-4 (Non-muscle alpha-actinin 4... 30 2.7
18ACTN4_RAT (Q9QXQ0) Alpha-actinin-4 (Non-muscle alpha-actinin 4) ... 30 3.5
19ACTN1_MOUSE (Q7TPR4) Alpha-actinin-1 (Alpha-actinin cytoskeletal... 30 3.5
20CART1_XENLA (Q91574) Cartilage homeoprotein 1 (CART-1) (XCART1) 30 3.5
21SMG1_HUMAN (Q96Q15) Serine/threonine-protein kinase SMG1 (EC 2.7... 30 3.5
22CLPB_STAAW (Q8NXE7) Chaperone clpB 30 3.5
23CLPB_STAAS (Q6GAV1) Chaperone clpB 30 3.5
24CLPB_STAAR (Q6GIB2) Chaperone clpB 30 3.5
25CLPB_STAAN (Q7A6G6) Chaperone clpB 30 3.5
26CLPB_STAAM (Q99VB5) Chaperone clpB 30 3.5
27CLPB_STAAC (Q5HHB0) Chaperone clpB 30 3.5
28PHL1_LEPIC (Q72P44) Sphingomyelinase C 1 precursor (EC 3.1.4.12)... 29 4.6
29PHL1_LEPIN (P59115) Sphingomyelinase C 1 precursor (EC 3.1.4.12)... 29 4.6
30UACA_BOVIN (Q8HYY4) Uveal autoantigen with coiled-coil domains a... 29 6.0
31GOGA4_MOUSE (Q91VW5) Golgin subfamily A member 4 (tGolgin-1) 29 6.0
32ACTN4_PONPY (Q5RCS6) Alpha-actinin-4 (Non-muscle alpha-actinin 4... 29 6.0
33HDA3_ASHGO (Q758V8) HDA1 complex subunit 3 (Histone deacetylase ... 29 6.0
34UACA_CANFA (Q9GL21) Uveal autoantigen with coiled-coil domains a... 29 6.0
35THOC2_HUMAN (Q8NI27) THO complex subunit 2 (Tho2) 28 7.9
36FSHB_SHEEP (P01227) Follitropin beta chain precursor (Follicle-s... 28 7.9
37FSHB_CAPHI (Q8HY83) Follitropin beta chain precursor (Follicle-s... 28 7.9
38SMG1_MOUSE (Q8BKX6) Serine/threonine-protein kinase SMG1 (EC 2.7... 28 7.9
39G6PD_ZYMMO (P21907) Glucose-6-phosphate 1-dehydrogenase (EC 1.1.... 28 7.9 
>DAAM2_HUMAN (Q86T65) Disheveled-associated activator of morphogenesis 2|
          Length = 1068

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 15/84 (17%)
 Frame = -2

Query: 354 EDLVAKEREMQEKLMARHATVVDSFEKKQRGQD---------------IENRIASQQQKI 220
           E+ V + R+  EK    H  +V   E+K+R  +               +++++A + Q++
Sbjct: 438 ENEVKQWRDQAEKFRKEHMELVSRLERKERECETKTLEKEEMMRTLNKMKDKLARESQEL 497

Query: 219 AALRQEVESLLEYLSEI*ASPVSS 148
              R +V  L+  LSE+   PVSS
Sbjct: 498 RQARGQVAELVAQLSELSTGPVSS 521
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>YG3A_YEAST (P53278) Hypothetical 92.7 kDa protein in ASN2-PHB1 intergenic|
           region
          Length = 816

 Score = 32.0 bits (71), Expect = 0.71
 Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
 Frame = -2

Query: 360 KLEDLVAKEREMQEKLMARHATVVDSFEKKQ---RGQDIENRIASQQQKIAALRQEVESL 190
           K EDLV +  E  +KL  ++  V++S E K+   +  DI+N+I+S   ++  ++QE  + 
Sbjct: 592 KKEDLVTQTEE-NKKLHEKNVQVLESVENKEYLPQINDIDNQISSLLNEVTIIKQENANE 650

Query: 189 LEYLSEI 169
              LS I
Sbjct: 651 KTQLSAI 657
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>Y1670_BACHD (Q9KCA3) UPF0302 protein BH1670|
          Length = 183

 Score = 31.6 bits (70), Expect = 0.93
 Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
 Frame = -2

Query: 363 PKLEDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRI-ASQQQKIAALRQEVESLL 187
           P+ EDL+AK++++ E  + R    V SFE+K+  + I+  + A  ++    L Q+++ L 
Sbjct: 123 PENEDLIAKQKKLAEAFLERS---VQSFEEKELLRRIDEALDARDKETFLTLSQQLQHLR 179

Query: 186 EY 181
           ++
Sbjct: 180 QH 181
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>TPM1_YEAST (P17536) Tropomyosin 1|
          Length = 199

 Score = 31.6 bits (70), Expect = 0.93
 Identities = 17/63 (26%), Positives = 35/63 (55%)
 Frame = -2

Query: 360 KLEDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRIASQQQKIAALRQEVESLLEY 181
           +++ L  K +++++++    A + DS + +Q   + EN+I S   K   L +E+E L   
Sbjct: 42  QIKSLTVKNQQLEDEIEKLEAGLSDSKQTEQDNVEKENQIKSLTVKNHQLEEEIEKLEAE 101

Query: 180 LSE 172
           L+E
Sbjct: 102 LAE 104
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>ACTN1_RAT (Q9Z1P2) Alpha-actinin-1 (Alpha-actinin cytoskeletal isoform)|
           (Non-muscle alpha-actinin-1) (F-actin cross linking
           protein)
          Length = 892

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = -2

Query: 375 YLIWPKL---EDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRIASQQQKIAALRQ 205
           YL  PK+   ED+V   R  ++ +M   ++   +F   Q+ +   NRI     K+ A+ Q
Sbjct: 215 YLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAFSGAQKAETAANRIC----KVLAVNQ 270

Query: 204 EVESLLE 184
           E E L+E
Sbjct: 271 ENEQLME 277
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>ACTN1_HUMAN (P12814) Alpha-actinin-1 (Alpha-actinin cytoskeletal isoform)|
           (Non-muscle alpha-actinin-1) (F-actin cross linking
           protein)
          Length = 892

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = -2

Query: 375 YLIWPKL---EDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRIASQQQKIAALRQ 205
           YL  PK+   ED+V   R  ++ +M   ++   +F   Q+ +   NRI     K+ A+ Q
Sbjct: 215 YLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAFSGAQKAETAANRIC----KVLAVNQ 270

Query: 204 EVESLLE 184
           E E L+E
Sbjct: 271 ENEQLME 277
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>PDE6A_MOUSE (P27664) Rod cGMP-specific 3',5'-cyclic phosphodiesterase|
           alpha-subunit (EC 3.1.4.35) (GMP-PDE alpha)
          Length = 858

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 21/65 (32%), Positives = 30/65 (46%)
 Frame = +3

Query: 93  HNIYTQSGDDIQPNR*RYKMRPDSLISR*GTLEEIRPLASAQRSSAAGKQSGFLCLARAA 272
           H   T   D I  NR  +K   D   ++   LEE +    A + +A+G Q G   L  A 
Sbjct: 791 HEEITPMLDGITNNRKEWKALADEYEAKMKALEEEKQKQQAAKQAASGNQPGGNPLQGAP 850

Query: 273 SSRSC 287
           +S+SC
Sbjct: 851 ASKSC 855
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>ACTN1_CHICK (P05094) Alpha-actinin-1 (Alpha-actinin cytoskeletal isoform)|
           (Non-muscle alpha-actinin-1) (F-actin cross linking
           protein)
          Length = 893

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = -2

Query: 375 YLIWPKL---EDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRIASQQQKIAALRQ 205
           YL  PK+   ED+V   R  ++ +M   ++   +F   Q+ +   NRI     K+ A+ Q
Sbjct: 216 YLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAFSGAQKAETAANRIC----KVLAVNQ 271

Query: 204 EVESLLE 184
           E E L+E
Sbjct: 272 ENEQLME 278
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>IF2_AGRT5 (Q8UJ51) Translation initiation factor IF-2|
          Length = 913

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = -2

Query: 357 LEDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRIASQQQKIAALRQE 202
           L DL A E E + + +   A   D  E KQR +D   R   ++Q+IAA + E
Sbjct: 123 LHDLSAGEMEARRRALME-AQARDVVEAKQRAEDEARRKVEEEQRIAAEKME 173
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>UACA_HUMAN (Q9BZF9) Uveal autoantigen with coiled-coil domains and ankyrin|
            repeats protein
          Length = 1416

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = -2

Query: 360  KLEDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRIASQQQKIAALRQEVESLLE 184
            KL+  V   ++  +KL  R   VVD  + K    D+E +I+S  +K+A L ++ E + E
Sbjct: 1203 KLQSEVQNTKQALKKLETRE--VVDLSKYKATKSDLETQISSLNEKLANLNRKYEEVCE 1259
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>HAPIP_RAT (P97924) Huntingtin-associated protein-interacting protein (Protein|
            Duo) (Kalirin) (PAM COOH-terminal interactor protein 10)
            (P-CIP10)
          Length = 1919

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
 Frame = -2

Query: 354  EDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRIASQQ--------QKIAALRQEV 199
            EDL   E+ +Q     + A    +FE  Q+GQD+   I   Q        +K   L  +V
Sbjct: 804  EDLTLAEQRLQRHTERKLAMNNMTFEVIQQGQDLHQYIMEVQASGIELICEKDVDLAAQV 863

Query: 198  ESLLEYLSE 172
            + LLE+L E
Sbjct: 864  QELLEFLHE 872
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>NONA_DROME (Q04047) Protein no-on-transient A (Puff-specific protein Bj6)|
          Length = 700

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = -2

Query: 372 LIWPKLEDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRIASQQQKIAALRQEVES 193
           L W   E    + R+ +E+ M RH T + S   +Q     E+ +  QQ+ +    Q++ S
Sbjct: 557 LEWEMREKQAEEMRKREEETMRRHQTEMQSHMNRQE----EDMLRRQQETLFMKAQQLNS 612

Query: 192 LLE 184
           LL+
Sbjct: 613 LLD 615
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>HAPIP_HUMAN (O60229) Huntingtin-associated protein-interacting protein (Protein|
            Duo)
          Length = 1663

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
 Frame = -2

Query: 354  EDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRIASQQ--------QKIAALRQEV 199
            EDL   E+ +Q     + A    +FE  Q+GQD+   I   Q        +K   L  +V
Sbjct: 802  EDLTLAEQRLQRHTERKLAMNNMTFEVIQQGQDLHQYITEVQASGIELICEKDIDLAAQV 861

Query: 198  ESLLEYLSE 172
            + LLE+L E
Sbjct: 862  QELLEFLHE 870
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>MYS_AEQIR (P24733) Myosin heavy chain, striated muscle|
          Length = 1938

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 18/60 (30%), Positives = 32/60 (53%)
 Frame = -2

Query: 357  LEDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRIASQQQKIAALRQEVESLLEYL 178
            +EDL   +RE++E +  + A +     K    +D +N ++  Q+KI  L+  +E L E L
Sbjct: 1063 VEDLERVKRELEENVRRKEAEISSLNSKL---EDEQNLVSQLQRKIKELQARIEELEEEL 1119
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>ACTN4_HUMAN (O43707) Alpha-actinin-4 (Non-muscle alpha-actinin 4) (F-actin|
           cross linking protein)
          Length = 911

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = -2

Query: 375 YLIWPKL---EDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRIASQQQKIAALRQ 205
           YL  PK+   ED+V   R  ++ +M   ++   +F   Q+ +   NRI     K+ A+ Q
Sbjct: 234 YLDIPKMLDAEDIVNTARPDEKAIMTYVSSFYHAFSGAQKAETAANRIC----KVLAVNQ 289

Query: 204 EVESLLE 184
           E E L+E
Sbjct: 290 ENEHLME 296
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>ACTN4_CHICK (Q90734) Alpha-actinin-4 (Non-muscle alpha-actinin 4) (F-actin|
           cross linking protein)
          Length = 904

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = -2

Query: 375 YLIWPKL---EDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRIASQQQKIAALRQ 205
           YL  PK+   ED+V   R  ++ +M   ++   +F   Q+ +   NRI     K+ A+ Q
Sbjct: 227 YLDIPKMLDAEDIVNTARPDEKAIMTYVSSFYHAFSGAQKAETAANRIC----KVLAVNQ 282

Query: 204 EVESLLE 184
           E E L+E
Sbjct: 283 ENEHLME 289
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>ACTN4_MOUSE (P57780) Alpha-actinin-4 (Non-muscle alpha-actinin 4) (F-actin|
           cross linking protein)
          Length = 912

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = -2

Query: 375 YLIWPKL---EDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRIASQQQKIAALRQ 205
           YL  PK+   ED+V   R  ++ +M   ++   +F   Q+ +   NRI     K+ A+ Q
Sbjct: 235 YLDIPKMLDAEDIVNTARPDEKAIMTYVSSFYHAFSGAQKAETAANRIC----KVLAVNQ 290

Query: 204 EVESLLE 184
           E E L+E
Sbjct: 291 ENEHLME 297
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>ACTN4_RAT (Q9QXQ0) Alpha-actinin-4 (Non-muscle alpha-actinin 4) (F-actin|
           cross linking protein)
          Length = 911

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = -2

Query: 375 YLIWPKL---EDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRIASQQQKIAALRQ 205
           YL  PK+   ED+V   R  ++ +M   ++   +F   Q+ +   NRI     K+ A+ Q
Sbjct: 234 YLDIPKMLDAEDIVNTGRPDEKAIMTYVSSFYHAFSGAQKAETAANRIC----KVLAVNQ 289

Query: 204 EVESLLE 184
           E E L+E
Sbjct: 290 ENEHLME 296
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>ACTN1_MOUSE (Q7TPR4) Alpha-actinin-1 (Alpha-actinin cytoskeletal isoform)|
           (Non-muscle alpha-actinin-1) (F-actin cross linking
           protein)
          Length = 892

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = -2

Query: 375 YLIWPKL---EDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRIASQQQKIAALRQ 205
           +L  PK+   ED+V   R  ++ +M   ++   +F   Q+ +   NRI     K+ A+ Q
Sbjct: 215 FLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAFSGAQKAETAANRIC----KVLAVNQ 270

Query: 204 EVESLLE 184
           E E L+E
Sbjct: 271 ENEQLME 277
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>CART1_XENLA (Q91574) Cartilage homeoprotein 1 (CART-1) (XCART1)|
          Length = 335

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +2

Query: 272 FFSKLSTTVACLAMSFSCISLSFATRSSSFGHIR*D*GDDCTDNNSGF 415
           F+SK    VA  A +  C+   F+    +  H+R +    C +NN+ +
Sbjct: 40  FYSKSPAVVAAAAGASKCVQQGFSAIHRAEHHVRMERASPCQENNANY 87
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>SMG1_HUMAN (Q96Q15) Serine/threonine-protein kinase SMG1 (EC 2.7.11.1) (SMG-1)|
            (hSMG-1) (Lambda/iota protein kinase C-interacting
            protein) (Lambda-interacting protein) (61E3.4)
          Length = 3657

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = -2

Query: 354  EDLVAKEREMQEKLMARHATVVDSFEKKQRG-QDIENRIASQQQKIAALRQEVESLLEYL 178
            EDL+    +         + ++ S +KK      IE  IA+ Q+K+AAL   +E  L++ 
Sbjct: 3201 EDLLINRPQAMSVTPPPRSAILTSMKKKLHTLSQIETSIATVQEKLAALESSIEQRLKWA 3260

Query: 177  SEI*ASPVSSYIVSD 133
                A+P  + ++ D
Sbjct: 3261 GG--ANPALAPVLQD 3273
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>CLPB_STAAW (Q8NXE7) Chaperone clpB|
          Length = 869

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 13/35 (37%), Positives = 25/35 (71%)
 Frame = -2

Query: 273 KQRGQDIENRIASQQQKIAALRQEVESLLEYLSEI 169
           KQR Q+++  +A++++K AAL+  VES  E ++ +
Sbjct: 437 KQRLQELQEELANEKEKQAALQSRVESEKEKIANL 471
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>CLPB_STAAS (Q6GAV1) Chaperone clpB|
          Length = 869

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 13/35 (37%), Positives = 25/35 (71%)
 Frame = -2

Query: 273 KQRGQDIENRIASQQQKIAALRQEVESLLEYLSEI 169
           KQR Q+++  +A++++K AAL+  VES  E ++ +
Sbjct: 437 KQRLQELQEELANEKEKQAALQSRVESEKEKIANL 471
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>CLPB_STAAR (Q6GIB2) Chaperone clpB|
          Length = 869

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 13/35 (37%), Positives = 25/35 (71%)
 Frame = -2

Query: 273 KQRGQDIENRIASQQQKIAALRQEVESLLEYLSEI 169
           KQR Q+++  +A++++K AAL+  VES  E ++ +
Sbjct: 437 KQRLQELQEELANEKEKQAALQSRVESEKEKIANL 471
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>CLPB_STAAN (Q7A6G6) Chaperone clpB|
          Length = 869

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 13/35 (37%), Positives = 25/35 (71%)
 Frame = -2

Query: 273 KQRGQDIENRIASQQQKIAALRQEVESLLEYLSEI 169
           KQR Q+++  +A++++K AAL+  VES  E ++ +
Sbjct: 437 KQRLQELQEELANEKEKQAALQSRVESEKEKIANL 471
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>CLPB_STAAM (Q99VB5) Chaperone clpB|
          Length = 869

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 13/35 (37%), Positives = 25/35 (71%)
 Frame = -2

Query: 273 KQRGQDIENRIASQQQKIAALRQEVESLLEYLSEI 169
           KQR Q+++  +A++++K AAL+  VES  E ++ +
Sbjct: 437 KQRLQELQEELANEKEKQAALQSRVESEKEKIANL 471
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>CLPB_STAAC (Q5HHB0) Chaperone clpB|
          Length = 869

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 13/35 (37%), Positives = 25/35 (71%)
 Frame = -2

Query: 273 KQRGQDIENRIASQQQKIAALRQEVESLLEYLSEI 169
           KQR Q+++  +A++++K AAL+  VES  E ++ +
Sbjct: 437 KQRLQELQEELANEKEKQAALQSRVESEKEKIANL 471
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>PHL1_LEPIC (Q72P44) Sphingomyelinase C 1 precursor (EC 3.1.4.12)|
           (Sphingomyelin phosphodiesterase 1) (SMase 1)
          Length = 596

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 16  DYGAYIKLQRSTDNLSLRN*DNG 84
           DYG Y K    +D+L ++N DNG
Sbjct: 505 DYGYYTKFNNGSDSLGIKNLDNG 527
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>PHL1_LEPIN (P59115) Sphingomyelinase C 1 precursor (EC 3.1.4.12)|
           (Sphingomyelin phosphodiesterase 1) (SMase 1)
          Length = 597

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 16  DYGAYIKLQRSTDNLSLRN*DNG 84
           DYG Y K    +D+L ++N DNG
Sbjct: 506 DYGYYTKFNNGSDSLGIKNLDNG 528
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>UACA_BOVIN (Q8HYY4) Uveal autoantigen with coiled-coil domains and ankyrin|
            repeats protein (Beta-actin-binding protein) (BetaCAP73)
          Length = 1401

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -2

Query: 360  KLEDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRIASQQQKIAALRQEVESLLE 184
            KL+  +   ++  +KL  R   VVD  + K    D+E +I+   +K+A L ++ E + E
Sbjct: 1188 KLQSEIQNTKQALKKLETRE--VVDLSKYKATKSDLETQISDLNEKLANLNRKYEEVCE 1244
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>GOGA4_MOUSE (Q91VW5) Golgin subfamily A member 4 (tGolgin-1)|
          Length = 2238

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
 Frame = -2

Query: 345  VAKEREMQEKLMARHATVVDSFEKKQR--GQDIENRIASQQQKIAALRQEVESLLEYLSE 172
            V  +R+ ++K+ A    ++   E+K +   +D ENR++    ++    ++V SL + L  
Sbjct: 1652 VELKRKAEQKIAAIRKQLLSQMEEKTQRYAKDTENRLSELSAQLKEREKQVHSLEDKLKN 1711

Query: 171  I*ASP 157
            + +SP
Sbjct: 1712 LESSP 1716
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>ACTN4_PONPY (Q5RCS6) Alpha-actinin-4 (Non-muscle alpha-actinin 4) (F-actin|
           cross linking protein)
          Length = 911

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = -2

Query: 375 YLIWPKL---EDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRIASQQQKIAALRQ 205
           YL  PK+   ED+V   R  ++ +M   ++   +F   Q+ +   NRI     ++ A+ Q
Sbjct: 234 YLDIPKMLDAEDIVNTARPDEKAIMTYVSSFYHAFSGAQKAETAANRIC----RVLAVNQ 289

Query: 204 EVESLLE 184
           E E L+E
Sbjct: 290 ENEHLME 296
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>HDA3_ASHGO (Q758V8) HDA1 complex subunit 3 (Histone deacetylase complex 1|
           subunit 3)
          Length = 637

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 9/35 (25%), Positives = 25/35 (71%)
 Frame = -2

Query: 273 KQRGQDIENRIASQQQKIAALRQEVESLLEYLSEI 169
           K + +D+E+ I  +++ + AL+ ++ +++EYL ++
Sbjct: 583 KNKSKDMEDDITQKKEAVLALQNQLGTIMEYLKQL 617
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>UACA_CANFA (Q9GL21) Uveal autoantigen with coiled-coil domains and ankyrin|
            repeats protein
          Length = 1415

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = -2

Query: 360  KLEDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRIASQQQKIAALRQEVESLLE 184
            KL+  V   ++  +KL  R   VVD  + K    D+E +I++  +K+A L ++ E   E
Sbjct: 1202 KLQSEVQDTKQALQKLETRE--VVDLSKYKATKSDLETQISNLNEKLANLNRKYEEACE 1258
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>THOC2_HUMAN (Q8NI27) THO complex subunit 2 (Tho2)|
          Length = 1478

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = -2

Query: 357 LEDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRIASQQQKIAALRQEVESLLEYL 178
           + D V KER   E L +    +  S +  Q+   I+ ++  +QQK   LR+E E   + +
Sbjct: 3   VSDTVLKERLDPETLESL-GLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLI 61

Query: 177 SEI*ASPVSSYIVSD 133
           +E+    +S  I SD
Sbjct: 62  AEL-GQDLSGSITSD 75
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>FSHB_SHEEP (P01227) Follitropin beta chain precursor (Follicle-stimulating|
           hormone beta subunit) (FSH-beta) (FSH-B)
          Length = 129

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 221 IFCCWEAIRFSMSCPRCFFSKLSTTVACLAMSFSCISLS 337
           +FCCW AI     C  C  + ++ TV     SF CIS++
Sbjct: 9   LFCCWRAI----CCRSCELTNITITVEKEECSF-CISIN 42
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>FSHB_CAPHI (Q8HY83) Follitropin beta chain precursor (Follicle-stimulating|
           hormone beta subunit) (FSH-beta) (FSH-B)
          Length = 129

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 221 IFCCWEAIRFSMSCPRCFFSKLSTTVACLAMSFSCISLS 337
           +FCCW AI     C  C  + ++ TV     SF CIS++
Sbjct: 9   LFCCWRAI----CCRSCELTNITITVEKEECSF-CISIN 42
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>SMG1_MOUSE (Q8BKX6) Serine/threonine-protein kinase SMG1 (EC 2.7.11.1) (SMG-1)|
          Length = 3658

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 19/74 (25%), Positives = 33/74 (44%)
 Frame = -2

Query: 354  EDLVAKEREMQEKLMARHATVVDSFEKKQRGQDIENRIASQQQKIAALRQEVESLLEYLS 175
            EDL+    +       R A +    +K      IE  I + Q+K+AAL   +E  L++  
Sbjct: 3203 EDLLISRPQAMSVTPPRSAILTSMKKKLHALSQIETSIGTVQEKLAALEASIEQRLKWAG 3262

Query: 174  EI*ASPVSSYIVSD 133
               A+P  + ++ D
Sbjct: 3263 G--ANPALAPVLQD 3274
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>G6PD_ZYMMO (P21907) Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) (G6PD)|
          Length = 485

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 93  HNIYTQSGDDIQPNR*RYKMRPDSLI 170
           H+I++ SG  +QPN+ R  ++PD  I
Sbjct: 352 HSIFSSSGGILQPNKLRIVLQPDETI 377


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,101,629
Number of Sequences: 219361
Number of extensions: 816447
Number of successful extensions: 2532
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2530
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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