>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  230 bits (116), Expect = 3e-57
 Identities = 209/240 (87%)
 Strand = Plus / Minus

                                                                            
Query: 181      acatcccccacgtatacgatatcgggctccgcacgtcctgctccccgctgctccacgtca 240
                ||||||||||||| |||||||||||||| |||||||| ||||| ||| ||||||| ||||
Sbjct: 16304856 acatcccccacgtgtacgatatcgggctgcgcacgtcgtgctcgccgttgctccaggtca 16304797

                                                                            
Query: 241      gccatccgaacgcggcgtccgtcgggccgccctgcgccgtcgacttgaacgcgacggtgt 300
                |||| ||||||||||||||||||||||| ||  ||| ||||||||||||||  |||||||
Sbjct: 16304796 gccacccgaacgcggcgtccgtcgggccaccgggcgtcgtcgacttgaacgtcacggtgt 16304737

                                                                            
Query: 301      acccgagcttgtccccggccttcttgaacgcgagccttgccggcttcacggacacgacga 360
                |||  |||||||||||||||||||||||||||||||| ||||||||||||| |||| | |
Sbjct: 16304736 acctcagcttgtccccggccttcttgaacgcgagcctcgccggcttcacggccacggcta 16304677

                                                                            
Query: 361      tgctgggcgggccggtgaccttggccgcgtacaccgacccggcggcgccgacgttggtca 420
                ||  |  ||| ||||||||| | || | ||||||||||| | || |||||||||||||||
Sbjct: 16304676 tgtcgctcggcccggtgaccctcgcggtgtacaccgacctgccgtcgccgacgttggtca 16304617



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 97       agccagaattcttccagcct 116
                ||||||||||||||||||||
Sbjct: 16304967 agccagaattcttccagcct 16304948

>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1344_B01
          Length = 170912

 Score =  230 bits (116), Expect = 3e-57
 Identities = 209/240 (87%)
 Strand = Plus / Minus

                                                                          
Query: 181    acatcccccacgtatacgatatcgggctccgcacgtcctgctccccgctgctccacgtca 240
              ||||||||||||| |||||||||||||| |||||||| ||||| ||| ||||||| ||||
Sbjct: 121372 acatcccccacgtgtacgatatcgggctgcgcacgtcgtgctcgccgttgctccaggtca 121313

                                                                          
Query: 241    gccatccgaacgcggcgtccgtcgggccgccctgcgccgtcgacttgaacgcgacggtgt 300
              |||| ||||||||||||||||||||||| ||  ||| ||||||||||||||  |||||||
Sbjct: 121312 gccacccgaacgcggcgtccgtcgggccaccgggcgtcgtcgacttgaacgtcacggtgt 121253

                                                                          
Query: 301    acccgagcttgtccccggccttcttgaacgcgagccttgccggcttcacggacacgacga 360
              |||  |||||||||||||||||||||||||||||||| ||||||||||||| |||| | |
Sbjct: 121252 acctcagcttgtccccggccttcttgaacgcgagcctcgccggcttcacggccacggcta 121193

                                                                          
Query: 361    tgctgggcgggccggtgaccttggccgcgtacaccgacccggcggcgccgacgttggtca 420
              ||  |  ||| ||||||||| | || | ||||||||||| | || |||||||||||||||
Sbjct: 121192 tgtcgctcggcccggtgaccctcgcggtgtacaccgacctgccgtcgccgacgttggtca 121133



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     agccagaattcttccagcct 116
              ||||||||||||||||||||
Sbjct: 121483 agccagaattcttccagcct 121464

>gb|AY340977.1| Squirrel poxvirus G9R gene, partial cds
          Length = 545

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 259 ccgtcgggccgccctgcgccgtcga 283
           |||||| ||||||||||||||||||
Sbjct: 333 ccgtcgagccgccctgcgccgtcga 309

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 388     cgtacaccgacccggcggcgccgac 412
               ||||||||||| |||||||||||||
Sbjct: 8390818 cgtacaccgactcggcggcgccgac 8390842

>gb|AC158405.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1366F05,
              complete sequence
          Length = 171022

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 57     acaatctccttatctcctttttaac 81
              ||||||||||| |||||||||||||
Sbjct: 139198 acaatctccttctctcctttttaac 139222

>ref|XM_507474.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0026D20.23
           mRNA
          Length = 1080

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 ccgaacgcggcgtccgtcgg 265
           ||||||||||||||||||||
Sbjct: 313 ccgaacgcggcgtccgtcgg 294

>ref|XM_506786.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0026D20.23
           mRNA
          Length = 1080

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 ccgaacgcggcgtccgtcgg 265
           ||||||||||||||||||||
Sbjct: 313 ccgaacgcggcgtccgtcgg 294

>ref|XM_465181.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1079

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 ccgaacgcggcgtccgtcgg 265
           ||||||||||||||||||||
Sbjct: 310 ccgaacgcggcgtccgtcgg 291

>ref|NM_183681.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 747

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 391 acaccgacccggcggcgccg 410
           ||||||||||||||||||||
Sbjct: 224 acaccgacccggcggcgccg 243

>gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015F11,
              complete sequence
          Length = 177574

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    ctgctccccgctgctccacg 237
              ||||||||||||||||||||
Sbjct: 117776 ctgctccccgctgctccacg 117795

>gb|AC144742.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0052F16,
              complete sequence
          Length = 162082

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 218    ctgctccccgctgctccacg 237
              ||||||||||||||||||||
Sbjct: 117775 ctgctccccgctgctccacg 117756

>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 358    cgatgctgggcgggccggtg 377
              ||||||||||||||||||||
Sbjct: 239394 cgatgctgggcgggccggtg 239413

>gb|DQ190117.1| Uncultured bacterium clone BF1C11 16S ribosomal RNA gene, partial
           sequence
          Length = 873

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 243 catccgaacgcggcgtccgtcggg 266
           |||||| |||||||||||||||||
Sbjct: 397 catccgcacgcggcgtccgtcggg 374

>gb|AC107758.19| Mus musculus chromosome 5, clone RP23-206B16, complete sequence
          Length = 188575

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 67     tatctcctttttaacagcacagaa 90
              |||||| |||||||||||||||||
Sbjct: 125429 tatctcatttttaacagcacagaa 125406

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 101      agaattcttccagcctatgc 120
                ||||||||||||||||||||
Sbjct: 11045996 agaattcttccagcctatgc 11045977

>gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic gene cluster
          Length = 109528

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   gtgaccttggccgcgtacac 394
             ||||||||||||||||||||
Sbjct: 46278 gtgaccttggccgcgtacac 46259

>ref|XM_949286.1| Theileria annulata strain Ankara hypothetical protein (TA21095)
           partial mRNA
          Length = 1728

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 111 cagcctatgcaacacttcca 130
           ||||||||||||||||||||
Sbjct: 11  cagcctatgcaacacttcca 30

>gb|AC157934.3| Mus musculus chromosome 5, clone RP24-224K15, complete sequence
          Length = 160733

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 67   tatctcctttttaacagcacagaa 90
            |||||| |||||||||||||||||
Sbjct: 7352 tatctcatttttaacagcacagaa 7329

>gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, complete sequence
          Length = 167588

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   agaattcttccagcctatgc 120
             ||||||||||||||||||||
Sbjct: 87126 agaattcttccagcctatgc 87145

>emb|AJ223012.1|AMM223012 Amycolatopsis mediterranei genes encoding rifamycin polyketide
             synthases, ORFs 1 to 5
          Length = 53784

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   gtgaccttggccgcgtacac 394
             ||||||||||||||||||||
Sbjct: 29873 gtgaccttggccgcgtacac 29854

>ref|NM_204573.1| Gallus gallus cgABP260 (LOC395260), mRNA
          Length = 8120

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 367  gcgggccggtgaccttggcc 386
            ||||||||||||||||||||
Sbjct: 7601 gcgggccggtgaccttggcc 7582

>dbj|AP004253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1116_C07
          Length = 108208

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 391   acaccgacccggcggcgccg 410
             ||||||||||||||||||||
Sbjct: 48422 acaccgacccggcggcgccg 48441

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 218      ctgctccccgctgctccacg 237
                ||||||||||||||||||||
Sbjct: 16326422 ctgctccccgctgctccacg 16326403



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 218      ctgctccccgctgctccacg 237
                ||||||||||||||||||||
Sbjct: 16032025 ctgctccccgctgctccacg 16032044

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 101      agaattcttccagcctatgc 120
                ||||||||||||||||||||
Sbjct: 11042759 agaattcttccagcctatgc 11042740

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 246      ccgaacgcggcgtccgtcgg 265
                ||||||||||||||||||||
Sbjct: 12128017 ccgaacgcggcgtccgtcgg 12128036

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 391      acaccgacccggcggcgccg 410
                ||||||||||||||||||||
Sbjct: 11594626 acaccgacccggcggcgccg 11594645

>dbj|AP007204.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0008D05
          Length = 134776

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 391    acaccgacccggcggcgccg 410
              ||||||||||||||||||||
Sbjct: 101633 acaccgacccggcggcgccg 101652

>dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0551A11
          Length = 132384

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 391   acaccgacccggcggcgccg 410
             ||||||||||||||||||||
Sbjct: 33750 acaccgacccggcggcgccg 33769

>dbj|AP005476.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0026D20
          Length = 130634

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   ccgaacgcggcgtccgtcgg 265
             ||||||||||||||||||||
Sbjct: 76322 ccgaacgcggcgtccgtcgg 76341

>dbj|AK110758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-H03, full
           insert sequence
          Length = 1187

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 391 acaccgacccggcggcgccg 410
           ||||||||||||||||||||
Sbjct: 337 acaccgacccggcggcgccg 356

>dbj|AK104533.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-D08, full
           insert sequence
          Length = 1080

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 ccgaacgcggcgtccgtcgg 265
           ||||||||||||||||||||
Sbjct: 313 ccgaacgcggcgtccgtcgg 294

>dbj|AK104098.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-D11, full
           insert sequence
          Length = 1079

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 ccgaacgcggcgtccgtcgg 265
           ||||||||||||||||||||
Sbjct: 310 ccgaacgcggcgtccgtcgg 291

>emb|BX890617.13| Zebrafish DNA sequence from clone DKEYP-84F11 in linkage group 19,
              complete sequence
          Length = 182182

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     cttttattaatgtgctgcta 32
              ||||||||||||||||||||
Sbjct: 101346 cttttattaatgtgctgcta 101365

>dbj|AK060903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E01, full
           insert sequence
          Length = 1080

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 ccgaacgcggcgtccgtcgg 265
           ||||||||||||||||||||
Sbjct: 313 ccgaacgcggcgtccgtcgg 294

>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0042B10, from chromosome 3, complete sequence
          Length = 144205

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   agaattcttccagcctatgc 120
             ||||||||||||||||||||
Sbjct: 89481 agaattcttccagcctatgc 89462

>emb|BX001002.4| Zebrafish DNA sequence from clone CH211-51G4 in linkage group 14,
             complete sequence
          Length = 177858

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    acaatctccttatctccttt 76
             ||||||||||||||||||||
Sbjct: 88526 acaatctccttatctccttt 88507

>dbj|AB056475.1| Gallus gallus mRNA for cgABP260, complete cds
          Length = 8120

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 367  gcgggccggtgaccttggcc 386
            ||||||||||||||||||||
Sbjct: 7601 gcgggccggtgaccttggcc 7582


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,618,142
Number of Sequences: 3902068
Number of extensions: 2618142
Number of successful extensions: 49214
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48859
Number of HSP's gapped (non-prelim): 353
length of query: 420
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 398
effective length of database: 17,147,199,772
effective search space: 6824585509256
effective search space used: 6824585509256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)