>gb|M36650.1|BLYGAPDH Barley glyceraldehyde-3-phosphate dehydrogenase mRNA, 3' end
          Length = 1141

 Score =  210 bits (106), Expect = 8e-52
 Identities = 132/142 (92%), Gaps = 1/142 (0%)
 Strand = Plus / Minus

                                                                        
Query: 4    gaaaataactcatgatttaattcaagcaagtacataataccaccaaaatgtgagccgcta 63
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1124 gaaaataactcatgatttagttcaagcaagtacataataccaccaaaatgtgagccgcta 1065

                                                                        
Query: 64   agctcaaccaaccatcaggatacatccaataaaaggnnnnnnnnagttgccataattcca 123
            ||||||||||||||||||||| ||||||||||||||        ||||||||||||||||
Sbjct: 1064 agctcaaccaaccatcaggat-catccaataaaaggttttttttagttgccataattcca 1006

                                  
Query: 124  tacaaaaatttattctcggaag 145
            ||||||||||||||||||||||
Sbjct: 1005 tacaaaaatttattctcggaag 984

>gb|AC008284.7| Drosophila melanogaster clone BACR03M22, complete sequence
          Length = 161996

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    ataattccatacaaaaattt 134
              ||||||||||||||||||||
Sbjct: 114326 ataattccatacaaaaattt 114307

>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03,
              complete sequence
          Length = 179798

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 114    cataattccatacaaaaatt 133
              ||||||||||||||||||||
Sbjct: 151831 cataattccatacaaaaatt 151850

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 114      cataattccatacaaaaatt 133
                ||||||||||||||||||||
Sbjct: 30884310 cataattccatacaaaaatt 30884329

>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete
             sequence
          Length = 134586

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   cataattccatacaaaaatt 133
             ||||||||||||||||||||
Sbjct: 60884 cataattccatacaaaaatt 60903

>gb|AE003751.3| Drosophila melanogaster chromosome 3R, section 89 of 118 of the complete
              sequence
          Length = 307443

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    ataattccatacaaaaattt 134
              ||||||||||||||||||||
Sbjct: 248319 ataattccatacaaaaattt 248338

>emb|BX284664.8| Zebrafish DNA sequence from clone DKEY-7I23 in linkage group 8,
             complete sequence
          Length = 228202

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   aattccatacaaaaatttat 136
             ||||||||||||||||||||
Sbjct: 28677 aattccatacaaaaatttat 28658

>emb|AL591973.1| Listeria monocytogenes strain EGD, complete genome, segment 1/12
          Length = 200050

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    caagcaagtacataatacca 45
             ||||||||||||||||||||
Sbjct: 17524 caagcaagtacataatacca 17505

>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome
          Length = 2905187

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    caagcaagtacataatacca 45
             ||||||||||||||||||||
Sbjct: 19606 caagcaagtacataatacca 19587

>gb|BT016420.1| Zea mays clone Contig253 mRNA sequence
          Length = 1831

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 127  aaaaatttattctcggaag 145
            |||||||||||||||||||
Sbjct: 1169 aaaaatttattctcggaag 1151

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 26/27 (96%), Gaps = 1/27 (3%)
 Strand = Plus / Plus

                                          
Query: 111     tgccataatt-ccatacaaaaatttat 136
               |||||||||| ||||||||||||||||
Sbjct: 2683052 tgccataattgccatacaaaaatttat 2683078

>gb|AY206598.1| Agouti paca APA1479 mitochondrial control region, partial sequence
          Length = 448

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 27  aagcaagtacataatacca 45
           |||||||||||||||||||
Sbjct: 136 aagcaagtacataatacca 154

>gb|AY206594.1| Agouti paca APA2396 mitochondrial control region, partial sequence
          Length = 447

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 27  aagcaagtacataatacca 45
           |||||||||||||||||||
Sbjct: 136 aagcaagtacataatacca 154

>gb|AY206586.1| Agouti paca APA2903 mitochondrial control region, partial sequence
          Length = 447

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 27  aagcaagtacataatacca 45
           |||||||||||||||||||
Sbjct: 136 aagcaagtacataatacca 154

>gb|AY206584.1| Agouti paca APA2428 mitochondrial control region, partial sequence
          Length = 447

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 27  aagcaagtacataatacca 45
           |||||||||||||||||||
Sbjct: 136 aagcaagtacataatacca 154

>gb|AY206583.1| Agouti paca APA2891 mitochondrial control region, partial sequence
          Length = 447

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 27  aagcaagtacataatacca 45
           |||||||||||||||||||
Sbjct: 136 aagcaagtacataatacca 154

>gb|AY206578.1| Agouti paca APA3492 mitochondrial control region, partial sequence
          Length = 443

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 27  aagcaagtacataatacca 45
           |||||||||||||||||||
Sbjct: 131 aagcaagtacataatacca 149

>gb|AC113043.7| Mus musculus chromosome 1, clone RP23-243C7, complete sequence
          Length = 191557

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 34    tacataataccaccaaaatgtga 56
             ||||||||||||||| |||||||
Sbjct: 15644 tacataataccaccacaatgtga 15622

>gb|AY348138.1| Tadarida brasiliensis cynocephala isolate WFlorida7 mitochondrial
           tRNA-Pro (trnP) gene and D-loop, partial sequence
          Length = 474

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 27  aagcaagtacataatacca 45
           |||||||||||||||||||
Sbjct: 370 aagcaagtacataatacca 388

>gb|AY348126.1| Tadarida brasiliensis cynocephala isolate EFlorida26 mitochondrial
           tRNA-Pro (trnP) gene and D-loop, partial sequence
          Length = 474

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 27  aagcaagtacataatacca 45
           |||||||||||||||||||
Sbjct: 370 aagcaagtacataatacca 388

>emb|AL157768.6| Human DNA sequence from clone RP11-481A22 on chromosome 13, complete
             sequence
          Length = 145603

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     gaaaataactcatgattta 22
             |||||||||||||||||||
Sbjct: 93145 gaaaataactcatgattta 93127

>emb|Z32531.1|SMCATHC S.mansoni (Liberian) mRNA for cathepsin C
          Length = 1659

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 123  atacaaaaatttattctcg 141
            |||||||||||||||||||
Sbjct: 1637 atacaaaaatttattctcg 1655

>emb|AL596163.1| Listeria innocua Clip11262 complete genome, segment 1/12
          Length = 231450

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    caagcaagtacataatacc 44
             |||||||||||||||||||
Sbjct: 17523 caagcaagtacataatacc 17505

>gb|L13431.1|MZEGAPDA Zea mays glyceraldehyde-3-phosphate dehydrogenase mRNA, partial cds
          Length = 899

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 127 aaaaatttattctcggaag 145
           |||||||||||||||||||
Sbjct: 799 aaaaatttattctcggaag 781

>emb|X73152.1|ZMGAPC4 Z.mays GapC4 gene
          Length = 4929

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 127  aaaaatttattctcggaag 145
            |||||||||||||||||||
Sbjct: 4570 aaaaatttattctcggaag 4552

>emb|AL953906.6| Mouse DNA sequence from clone RP23-109E21 on chromosome 2, complete
              sequence
          Length = 172246

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 117    aattccatacaaaaattta 135
              |||||||||||||||||||
Sbjct: 135613 aattccatacaaaaattta 135631

>gb|U45857.1|ZMU45857 Zea mays glyceraldehyde-3-phosphate dehydrogenase GAPC4 (gpc4) mRNA,
            complete cds
          Length = 1232

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 127  aaaaatttattctcggaag 145
            |||||||||||||||||||
Sbjct: 1110 aaaaatttattctcggaag 1092

>gb|U45856.1|ZMU45856 Zea mays glyceraldehyde-3-phosphate dehydrogenase GAPC3 (gpc3) mRNA,
            complete cds
          Length = 1281

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 127  aaaaatttattctcggaag 145
            |||||||||||||||||||
Sbjct: 1180 aaaaatttattctcggaag 1162


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,866,987
Number of Sequences: 3902068
Number of extensions: 1866987
Number of successful extensions: 95962
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 95820
Number of HSP's gapped (non-prelim): 144
length of query: 145
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 124
effective length of database: 17,151,101,840
effective search space: 2126736628160
effective search space used: 2126736628160
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)