| Clone Name | rbaet34h07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC154642.2| Mus musculus BAC clone RP23-277C14 from chromosome 14, complete sequence Length = 211315 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 tacattgcccacagctagggagag 78 |||||||| ||||||||||||||| Sbjct: 81357 tacattgctcacagctagggagag 81380
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 0.86 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aatccttccatccattcgct 28 |||||||||||||||||||| Sbjct: 519053 aatccttccatccattcgct 519034
>gb|AC140722.11| Medicago truncatula clone mth2-14e20, complete sequence Length = 97982 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 42 ggctcaattaatttacatt 60 ||||||||||||||||||| Sbjct: 43665 ggctcaattaatttacatt 43647
>emb|AL731553.12| Human DNA sequence from clone RP11-56M3 on chromosome 10 Contains a nudix (nucleoside diphosphate linked moiety X)-type pseudogene, complete sequence Length = 99089 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 37 ccttgggctcaattaattt 55 ||||||||||||||||||| Sbjct: 63002 ccttgggctcaattaattt 62984
>emb|AL360236.26| Human DNA sequence from clone RP11-380M3 on chromosome 6 Contains a novel pseudogene, part of the KCNQ5 gene for potassium voltage-gated channel KQT-like subfamily member 5, and a phosphoglycerate mutase 1 (brain) (PGAM1) pseudogene, complete sequence Length = 154998 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 37 ccttgggctcaattaattt 55 ||||||||||||||||||| Sbjct: 42084 ccttgggctcaattaattt 42102
>gb|AC018977.9| Homo sapiens chromosome 10 clone RP11-386C23, complete sequence Length = 222810 Score = 38.2 bits (19), Expect = 3.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 49 ttaatttacattgcccaca 67 ||||||||||||||||||| Sbjct: 93612 ttaatttacattgcccaca 93630
>emb|AL158077.15| Human DNA sequence from clone RP11-471J7 on chromosome 9 Contains the 5' end of the SLC24A2 gene for solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 (NCKX2) and a CpG island, complete sequence Length = 159900 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 41 gggctcaattaatttacattgcc 63 ||||| ||||||||||||||||| Sbjct: 90856 gggcttaattaatttacattgcc 90878
>emb|AL109940.18|HSJ421D16 Human DNA sequence from clone RP3-421D16 on chromosome 6q26-27 Contains part of the gene for smooth muscle cell associated protein 2 (SMAP2) or secreted modular calcium binding protein 2 (SMOC2) and two CpG islands, complete sequence Length = 110603 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 58 attgcccacagctagggagaggg 80 ||||| ||||||||||||||||| Sbjct: 77044 attgctcacagctagggagaggg 77022 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 717,985 Number of Sequences: 3902068 Number of extensions: 717985 Number of successful extensions: 48834 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 48810 Number of HSP's gapped (non-prelim): 24 length of query: 82 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 61 effective length of database: 17,151,101,840 effective search space: 1046217212240 effective search space used: 1046217212240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)