>emb|X52472.1|TAPRP T.aestivum mRNA for a proline-rich protein
          Length = 1487

 Score =  325 bits (164), Expect = 5e-86
 Identities = 237/258 (91%), Gaps = 5/258 (1%)
 Strand = Plus / Minus

                                                                        
Query: 44   acacgaaagaacaaccgagtcatgtgcacagatgaacgcataccagcacgcaaatgataa 103
            ||||||||||||||| |||||||||||||||||||||  |||||| ||||||||||||||
Sbjct: 1487 acacgaaagaacaactgagtcatgtgcacagatgaacatataccaacacgcaaatgataa 1428

                                                                        
Query: 104  ttacaaagtagtaataatcatcatgggtgcatggaacaagagaaactaaaaagggatgat 163
            ||||| | ||||| || |||||||||||||||||||||| ||||||||||| || ||| |
Sbjct: 1427 ttacagaatagtagtactcatcatgggtgcatggaacaacagaaactaaaa-ggaatggt 1369

                                                                        
Query: 164  ggaatacaaggaatgcaaaaaagatgcatcatcactatctcgctagccggatactatgcc 223
            |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 1368 ggaatacaaggaatacaaaaa-gatgcatcatcactatctcgctaaccggatactatgcc 1310

                                                                        
Query: 224  acttattctggaaatagcacatcgtggctccggacggggtcgatctcctcctccttcggc 283
            ||||||||| ||||||||||||||||||||||||||||||||||   |||||||||| ||
Sbjct: 1309 acttattctagaaatagcacatcgtggctccggacggggtcgat---ctcctccttcagc 1253

                              
Query: 284  tgtcatatgtgagcatca 301
            ||||||||||||| ||||
Sbjct: 1252 tgtcatatgtgagtatca 1235

>ref|NM_128161.1| Arabidopsis thaliana PDF1.2b AT2G26020 (PDF1.2b) mRNA, complete cds
          Length = 274

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 106 acaaagtagtaataatcatcatgg 129
           ||||||||||||||||||||||||
Sbjct: 12  acaaagtagtaataatcatcatgg 35

>gb|AC004747.3| Arabidopsis thaliana chromosome 2 clone T19L18 map B68, complete
             sequence
          Length = 87080

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 106   acaaagtagtaataatcatcatgg 129
             ||||||||||||||||||||||||
Sbjct: 55234 acaaagtagtaataatcatcatgg 55211

>gb|AC163706.2| Gallus gallus BAC clone CH261-71A16 from chromosome w, complete sequence
          Length = 206206

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 145    gaaactaaaaagggatgatggaatacaagga 175
              |||||||||  ||||||||||||||||||||
Sbjct: 113780 gaaactaaactgggatgatggaatacaagga 113810

>emb|AL391478.14| Human DNA sequence from clone RP11-552I13 on chromosome 10 Contains
             part of the NRG3 gene for neuregulin 3, complete sequence
          Length = 180625

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 11    cattcatgtaaatgaataagat 32
             ||||||||||||||||||||||
Sbjct: 22851 cattcatgtaaatgaataagat 22830

>emb|AL357515.26| Human DNA sequence from clone RP11-397G5 on chromosome 6 Contains the 3'
              end of the AMD1 gene for S-adenosylmethionine decarboxylase
              1, two novel genes, a glutathione S-transferase M2 (muscle)
              (GSTM2) pseudogene and three CpG islands, complete sequence
          Length = 190440

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 64     catgtgcacagatgaacgcat 84
              |||||||||||||||||||||
Sbjct: 121761 catgtgcacagatgaacgcat 121741

>emb|AL138776.10| Human DNA sequence from clone RP11-20H6 on chromosome 1q25.1-31.1
             Contains the 3' end of the RGSL1 gene for regulator of
             G-protein signalling like 1, the RNASEL gene for
             ribonuclease L (2',5'-oligoisoadenylate
             synthetase-dependent) and a CpG island, complete sequence
          Length = 100549

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 164   ggaatacaaggaatgcaaaaa 184
             |||||||||||||||||||||
Sbjct: 33257 ggaatacaaggaatgcaaaaa 33277

>gb|AY961377.1| Arabidopsis halleri putative plant defensin PDF1.2 mRNA, complete
           cds
          Length = 432

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 109 aagtagtaataatcatcatgg 129
           |||||||||||||||||||||
Sbjct: 21  aagtagtaataatcatcatgg 41

>gb|AY961376.1| Arabidopsis halleri putative plant defensin PDF1.1 mRNA, complete
           cds
          Length = 431

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 109 aagtagtaataatcatcatgg 129
           |||||||||||||||||||||
Sbjct: 23  aagtagtaataatcatcatgg 43

>gb|AC017074.9| Homo sapiens BAC clone RP11-432G15 from 2, complete sequence
          Length = 142432

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 63    tcatgtgcacagatgaacgca 83
             |||||||||||||||||||||
Sbjct: 62422 tcatgtgcacagatgaacgca 62402

>emb|AL732543.8| Mouse DNA sequence from clone RP23-13D22 on chromosome 4, complete
             sequence
          Length = 195272

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 156   gggatgatggaatacaaggaa 176
             |||||||||||||||||||||
Sbjct: 77733 gggatgatggaatacaaggaa 77713

>ref|NM_123809.3| Arabidopsis thaliana PDF1.2 AT5G44420 (PDF1.2) mRNA, complete cds
          Length = 438

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 106 acaaagtagtaataatcatcatgg 129
           ||||| ||||||||||||||||||
Sbjct: 29  acaaaatagtaataatcatcatgg 52

>gb|AC154426.2| Mus musculus BAC clone RP24-199A21 from chromosome 14, complete
            sequence
          Length = 210568

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 163  tggaatacaaggaatgcaaaaaag 186
            |||||||||||| |||||||||||
Sbjct: 6876 tggaatacaaggcatgcaaaaaag 6853

>ref|XM_760578.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
            (TP01_0144) partial mRNA
          Length = 3657

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 108  aaagtagtaataatcatcat 127
            ||||||||||||||||||||
Sbjct: 3006 aaagtagtaataatcatcat 2987

>ref|XM_949479.1| Theileria annulata strain Ankara hypothetical protein (TA19075)
            partial mRNA
          Length = 3639

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 108  aaagtagtaataatcatcat 127
            ||||||||||||||||||||
Sbjct: 2991 aaagtagtaataatcatcat 2972

>gb|AC147202.14| Medicago truncatula clone mth2-165g15, complete sequence
          Length = 116731

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     cacatattgtcattcatgta 20
             ||||||||||||||||||||
Sbjct: 92538 cacatattgtcattcatgta 92557

>emb|AL512635.8| Human DNA sequence from clone RP11-15P13 on chromosome 9 Contains a
             survival of motor neuron 1, telomeric (SMN1) pseudogene
             and the 3' end of the MLLT3 gene for myeloid/lymphoid or
             mixed-lineage leukemia (trithorax homolog, Drosophila);
             translocated to, 3 (AF9), complete sequence
          Length = 178631

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    aataagatcatgtgtacata 44
             ||||||||||||||||||||
Sbjct: 63562 aataagatcatgtgtacata 63581

>gb|AC091204.3| Drosophila melanogaster 3L NOVECTOR RP98-27G13 (Roswell Park Cancer
              Institute Drosophila BAC Library) complete sequence
          Length = 185825

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    atggaatacaaggaatgcaaaaaa 185
              |||||||||| |||||||||||||
Sbjct: 165497 atggaatacagggaatgcaaaaaa 165520

>gb|AY063779.1| Arabidopsis thaliana putative antifungal protein PDF1.2 (At5g44420)
           mRNA, complete cds
          Length = 454

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 106 acaaagtagtaataatcatcatgg 129
           ||||| ||||||||||||||||||
Sbjct: 29  acaaaatagtaataatcatcatgg 52

>gb|AC091221.3| Drosophila melanogaster 3L BAC RP98-9I19 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 185790

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 162    atggaatacaaggaatgcaaaaaa 185
              |||||||||| |||||||||||||
Sbjct: 182112 atggaatacagggaatgcaaaaaa 182089

>gb|AY961378.1| Arabidopsis halleri putative plant defensin PDF1.3 mRNA, complete
           cds
          Length = 421

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 106 acaaagtagtaataatcatcatgg 129
           ||||||||||||||||||| ||||
Sbjct: 13  acaaagtagtaataatcattatgg 36

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 261     ggtcgatctcctcctccttcggct 284
               ||||||||||||||||||| ||||
Sbjct: 8641318 ggtcgatctcctcctcctttggct 8641295

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    tcctcctccttcggctgtca 288
              ||||||||||||||||||||
Sbjct: 301516 tcctcctccttcggctgtca 301497

>gb|AC073912.38| Homo sapiens 12 BAC RP11-989F5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 211550

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 166    aatacaaggaatgcaaaaaagatg 189
              ||||||||||||||||| ||||||
Sbjct: 209378 aatacaaggaatgcaaagaagatg 209401

>dbj|AB017065.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFC16
          Length = 61290

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 106   acaaagtagtaataatcatcatgg 129
             ||||| ||||||||||||||||||
Sbjct: 21015 acaaaatagtaataatcatcatgg 20992

>gb|AE003557.4| Drosophila melanogaster chromosome 3L, section 28 of 83 of the complete
              sequence
          Length = 287988

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    atggaatacaaggaatgcaaaaaa 185
              |||||||||| |||||||||||||
Sbjct: 273298 atggaatacagggaatgcaaaaaa 273321

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    tcctcctccttcggctgtca 288
              ||||||||||||||||||||
Sbjct: 301516 tcctcctccttcggctgtca 301497

>emb|AL731598.2|OSJN00248 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065B15,
              complete sequence
          Length = 150007

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 261    ggtcgatctcctcctccttcggct 284
              ||||||||||||||||||| ||||
Sbjct: 101761 ggtcgatctcctcctcctttggct 101738

>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 160673

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 269  tcctcctccttcggctgtca 288
            ||||||||||||||||||||
Sbjct: 3477 tcctcctccttcggctgtca 3496

>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 164143

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 269  tcctcctccttcggctgtca 288
            ||||||||||||||||||||
Sbjct: 8834 tcctcctccttcggctgtca 8815

>gb|AC166148.5| Cavia porcellus, clone Cavia porcellus-24948757J7, complete sequence
          Length = 40129

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 95    aaatgataattacaaagtagtaat 118
             |||||||||||| |||||||||||
Sbjct: 36196 aaatgataattaaaaagtagtaat 36173


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,517,359
Number of Sequences: 3902068
Number of extensions: 3517359
Number of successful extensions: 71628
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71462
Number of HSP's gapped (non-prelim): 163
length of query: 301
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 279
effective length of database: 17,147,199,772
effective search space: 4784068736388
effective search space used: 4784068736388
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)