| Clone Name | rbaet34a09 |
|---|---|
| Clone Library Name | barley_pub |
>YR753_MIMIV (Q5UP09) Putative F-box/LRR-repeat protein R753| Length = 751 Score = 30.4 bits (67), Expect = 1.3 Identities = 21/60 (35%), Positives = 28/60 (46%) Frame = +1 Query: 1 SSCE*DSDAQEIEEVSYELGKVRPAGRRDELPVGDGAFSLHRDGAGEASDDSHGDSARAS 180 SS DSD I +VSY +G+V D G + S D ++SDDS G + S Sbjct: 219 SSDSSDSDLDAISDVSYVVGEVSDDDNSDS---GSDSSSDSSDDNSDSSDDSSGKNTSKS 275
>EPN2_HUMAN (O95208) Epsin-2 (EPS-15-interacting protein 2)| Length = 642 Score = 28.9 bits (63), Expect = 3.8 Identities = 20/67 (29%), Positives = 31/67 (46%) Frame = +1 Query: 4 SCE*DSDAQEIEEVSYELGKVRPAGRRDELPVGDGAFSLHRDGAGEASDDSHGDSARASL 183 +C+ + A VS EL + RP +E A ++ R+ A + GD R + Sbjct: 249 TCDRAARASTSPRVSSELEQARPQTSGEEELQLQLALAMSREVAEQEERLRRGDDLRLQM 308 Query: 184 ALEQPRR 204 ALE+ RR Sbjct: 309 ALEESRR 315
>HTS_DROME (Q02645) Protein hu-li tai shao (Adducin-like protein)| Length = 1156 Score = 28.5 bits (62), Expect = 5.0 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 8/59 (13%) Frame = +1 Query: 49 YELGKVRPAGRRDELPVGDGAFSLHRD--GAGEASDDSHGDS------ARASLALEQPR 201 Y + KV P + + PV DG S+H + GAG + +S S A AS++L + R Sbjct: 692 YVIHKVEPVSKHNYPPVNDGNMSIHHNESGAGFMAQESSVISSTPVRNALASVSLPEER 750
>ARP_EUGGR (Q04732) Calcium-binding acidic-repeat protein precursor (ARP)| Length = 695 Score = 27.7 bits (60), Expect = 8.4 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +1 Query: 94 PVGDGAFSLHRDGAGEASDDSHGDSARASLALEQPRRGE 210 P+G GA HR G+ DD D A ++ P+ G+ Sbjct: 124 PMGGGAEVRHRPQNGDTDDDGLTDGAEVNVHRTNPQDGD 162
>COBT_MYCTU (P63841) Nicotinate-nucleotide--dimethylbenzimidazole| phosphoribosyltransferase (EC 2.4.2.21) (NN:DBI PRT) (N(1)-alpha-phosphoribosyltransferase) Length = 361 Score = 27.7 bits (60), Expect = 8.4 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = -1 Query: 180 RCASGVPMRVIASLAGAIAVEAKGAVADGKLVTAAS 73 RCA G + IA AV + DG VTAA+ Sbjct: 233 RCAGGADLAAIAGFCAQAAVRRTPLLLDGVAVTAAA 268
>COBT_MYCBO (P63842) Nicotinate-nucleotide--dimethylbenzimidazole| phosphoribosyltransferase (EC 2.4.2.21) (NN:DBI PRT) (N(1)-alpha-phosphoribosyltransferase) Length = 361 Score = 27.7 bits (60), Expect = 8.4 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = -1 Query: 180 RCASGVPMRVIASLAGAIAVEAKGAVADGKLVTAAS 73 RCA G + IA AV + DG VTAA+ Sbjct: 233 RCAGGADLAAIAGFCAQAAVRRTPLLLDGVAVTAAA 268
>PCY1_YEAST (P13259) Choline-phosphate cytidylyltransferase (EC 2.7.7.15)| (Phosphorylcholine transferase) (CTP:phosphocholine cytidylyltransferase) (CT) (CCT) Length = 424 Score = 27.7 bits (60), Expect = 8.4 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +1 Query: 16 DSDAQEIEEVSYELGKVRPAGRRDELPVGDGAFSLHRDG 132 + +A+ E+ EL K RP G R LP D ++ DG Sbjct: 72 EKEARYTNELPKELRKYRPKGFRFNLPPTDRPIRIYADG 110 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.134 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,514,412 Number of Sequences: 219361 Number of extensions: 337625 Number of successful extensions: 1099 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1078 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1099 length of database: 80,573,946 effective HSP length: 48 effective length of database: 70,044,618 effective search space used: 1681070832 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)