>gb|AC154875.8| Mus musculus chromosome 3, clone RP23-14O16, complete sequence
          Length = 225841

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 30    tgtttatttccatggaagaacattt 54
             |||||||||||||||||||||||||
Sbjct: 78306 tgtttatttccatggaagaacattt 78282

>gb|AC146538.2| Gasterosteus aculeatus clone CH213-118G22, complete sequence
          Length = 211945

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 178    ttgaaaacagaggtaataaaa 198
              |||||||||||||||||||||
Sbjct: 112802 ttgaaaacagaggtaataaaa 112822

>gb|AC092684.2| Homo sapiens BAC clone RP11-746G4 from 2, complete sequence
          Length = 153371

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 42     tggaagaacattttgagtcac 62
              |||||||||||||||||||||
Sbjct: 131389 tggaagaacattttgagtcac 131369

>gb|AC131323.10| Mus musculus chromosome 17, clone RP23-421I23, complete sequence
          Length = 239215

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 41     atggaagaacattttgagtca 61
              |||||||||||||||||||||
Sbjct: 101391 atggaagaacattttgagtca 101411

>dbj|AP001709.1| Homo sapiens genomic DNA, chromosome 21q, section 53/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 52    ttttgagtcacacttacattt 72
             |||||||||||||||||||||
Sbjct: 70615 ttttgagtcacacttacattt 70635

>dbj|AP000243.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:B335C24, complete sequence
          Length = 96174

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 52    ttttgagtcacacttacattt 72
             |||||||||||||||||||||
Sbjct: 84573 ttttgagtcacacttacattt 84593

>dbj|AP000204.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
            clone f43D11-119B8, segment 2/12, complete sequence
          Length = 100000

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 52   ttttgagtcacacttacattt 72
            |||||||||||||||||||||
Sbjct: 5603 ttttgagtcacacttacattt 5623

>gb|AC149537.2| Xenopus tropicalis clone ISB-378C9, complete sequence
          Length = 80137

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    tgtgatcaaactgtttattt 38
             ||||||||||||||||||||
Sbjct: 73597 tgtgatcaaactgtttattt 73616

>ref|XM_989664.1| PREDICTED: Mus musculus antigen identified by monoclonal antibody Ki
            67 (Mki67), mRNA
          Length = 6068

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 225  ccaaaccccaaagataaacc 244
            ||||||||||||||||||||
Sbjct: 3222 ccaaaccccaaagataaacc 3241

>ref|XM_001000692.1| PREDICTED: Mus musculus antigen identified by monoclonal antibody Ki
            67 (Mki67), mRNA
          Length = 9156

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 225  ccaaaccccaaagataaacc 244
            ||||||||||||||||||||
Sbjct: 2984 ccaaaccccaaagataaacc 3003

>ref|XM_133912.7| PREDICTED: Mus musculus antigen identified by monoclonal antibody Ki
            67, transcript variant 1 (Mki67), mRNA
          Length = 9394

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 225  ccaaaccccaaagataaacc 244
            ||||||||||||||||||||
Sbjct: 3222 ccaaaccccaaagataaacc 3241

>gb|AC134535.4| Mus musculus BAC clone RP24-371E20 from chromosome 7, complete
            sequence
          Length = 214571

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 225  ccaaaccccaaagataaacc 244
            ||||||||||||||||||||
Sbjct: 6267 ccaaaccccaaagataaacc 6248

>gb|AC123047.3| Mus musculus BAC clone RP24-378B22 from chromosome 7, complete sequence
          Length = 157795

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    ccaaaccccaaagataaacc 244
              ||||||||||||||||||||
Sbjct: 134736 ccaaaccccaaagataaacc 134717

>emb|CR318645.2| Zebrafish DNA sequence from clone CH211-161F7 in linkage group 11,
             complete sequence
          Length = 138050

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    acattttgagtcacacttac 68
             ||||||||||||||||||||
Sbjct: 59359 acattttgagtcacacttac 59378

>emb|X82786.1|MMKI67 M.musculus mRNA for Ki-67
          Length = 9471

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 225  ccaaaccccaaagataaacc 244
            ||||||||||||||||||||
Sbjct: 3292 ccaaaccccaaagataaacc 3311

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 305     gacgagcagcaccagcagcg 324
               ||||||||||||||||||||
Sbjct: 4193940 gacgagcagcaccagcagcg 4193959

>gb|AC162691.2| Mus musculus chromosome 1, clone RP23-263K13, complete sequence
          Length = 173327

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   atcacatgacaaactgcatt 293
             ||||||||||||||||||||
Sbjct: 20654 atcacatgacaaactgcatt 20635

>emb|BX537135.9| Zebrafish DNA sequence from clone DKEY-57B1 in linkage group 14,
             complete sequence
          Length = 108341

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    atcaaactgtttatttccat 42
             ||||||||||||||||||||
Sbjct: 75643 atcaaactgtttatttccat 75662

>gb|CP000237.1| Neorickettsia sennetsu strain Miyayama, complete genome
          Length = 859006

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   agcagcaccagcagcgtcat 328
             ||||||||||||||||||||
Sbjct: 82959 agcagcaccagcagcgtcat 82940

>dbj|AK082099.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:C230007D16 product:antigen
            identified by monoclonal antibody Ki 67, full insert
            sequence
          Length = 3392

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 225  ccaaaccccaaagataaacc 244
            ||||||||||||||||||||
Sbjct: 3103 ccaaaccccaaagataaacc 3122

>gb|AC035150.1|AC035150 Homo sapiens chromosome 19, BAC CIT978SKB_99E8 (BC67347), complete
             sequence
          Length = 90141

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   aaaacagaggtaataaaaga 200
             ||||||||||||||||||||
Sbjct: 47073 aaaacagaggtaataaaaga 47092

>emb|Z61321.1|HS4H4F H.sapiens CpG island DNA genomic Mse1 fragment, clone 4h4, forward
           read cpg4h4.ft1d
          Length = 241

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 181 aaaacagaggtaataaaaga 200
           ||||||||||||||||||||
Sbjct: 84  aaaacagaggtaataaaaga 65

>gb|AC006213.1|AC006213 Homo sapiens, clone hRPK.15_A_1, complete sequence
          Length = 160754

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   aaaacagaggtaataaaaga 200
             ||||||||||||||||||||
Sbjct: 74895 aaaacagaggtaataaaaga 74876

>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    caccagcagcgtcatggcgg 333
              ||||||||||||||||||||
Sbjct: 263316 caccagcagcgtcatggcgg 263335

>gb|AC131750.3| Mus musculus BAC clone RP23-34F5 from 1, complete sequence
          Length = 190325

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   atcacatgacaaactgcatt 293
             ||||||||||||||||||||
Sbjct: 77192 atcacatgacaaactgcatt 77211


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,267,689
Number of Sequences: 3902068
Number of extensions: 3267689
Number of successful extensions: 69213
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69091
Number of HSP's gapped (non-prelim): 122
length of query: 367
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 345
effective length of database: 17,147,199,772
effective search space: 5915783921340
effective search space used: 5915783921340
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)