ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet33h11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransgly... 595 e-167
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 119 6e-24
3dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic D... 119 6e-24
4dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 6e-24
5gb|AY023463.1| Oryza sativa microsatellite MRG5788 containing (T... 115 9e-23
6emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein 90 5e-15
7emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransgly... 82 1e-12
8gb|AY103775.1| Zea mays PCO076979 mRNA sequence 76 7e-11
9gb|BT014685.1| Oryza sativa AK104912 mRNA sequence 74 3e-10
10gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase ... 74 3e-10
11dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic D... 74 3e-10
12dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 3e-10
13dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 3e-10
14dbj|AK058291.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 3e-10
15gb|AY103891.1| Zea mays PCO065722 mRNA sequence 66 7e-08
16gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence 58 2e-05
17gb|AY106776.1| Zea mays PCO076978 mRNA sequence 58 2e-05
18gb|AY476737.1| Gossypium hirsutum XET mRNA, partial sequence 52 0.001
19gb|DQ100340.1| Eucalyptus globulus putative xyloglucan endotrans... 52 0.001
20gb|AF223420.1|AF223420 Asparagus officinalis xyloglucan endotran... 50 0.004
21dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan en... 50 0.004
22dbj|AB083025.1| Glycine max mRNA for syringolide-induced protein... 50 0.004
23emb|AJ555155.1|CSA555155 Cucumis sativus XTH3 gene for putative ... 46 0.067
24emb|AJ555126.1|CSA555126 Cucumis sativus mRNA for putative xylog... 46 0.067
25gb|AY105365.1| Zea mays PCO092487 mRNA sequence 46 0.067
26gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase h... 46 0.067
27gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase h... 46 0.067
28ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predic... 44 0.26
29gb|AY365421.1| Sesamum indicum xyloglucan endotransglycosylase m... 44 0.26
30emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransgly... 44 0.26
31gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase... 44 0.26
32emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4,... 44 0.26
33emb|AJ130885.1|FSY130885 Fagus sylvatica mRNA for xyloglucan end... 44 0.26
34dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.26
35dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.26
36gb|AY841854.1| Vigna radiata xyloglucan endotransglucosylase/hyd... 42 1.0
37gb|BC090193.1| Xenopus laevis cDNA clone MGC:85054 IMAGE:6327047... 42 1.0
38dbj|AB086396.1| Vigna angularis VaXTH2 gene for xyloglucan endot... 42 1.0
39gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase... 42 1.0
40dbj|D16455.1|SOYEXT2 Soybean mRNA for endo-xyloglucan transferas... 42 1.0
41emb|AL590111.14| Human DNA sequence from clone RP11-570F3 on chr... 40 4.1
42emb|BX571768.19| Zebrafish DNA sequence from clone DKEYP-2C4 in ... 40 4.1
43gb|AC148685.1| Macaca mulatta Major Histocompatibility Complex B... 40 4.1
44dbj|AB086395.1| Vigna angularis VaXTH1 gene for xyloglucan endot... 40 4.1
45gb|L46792.1|ACTXET Actinidia deliciosa clone AdXET-5 xyloglucan ... 40 4.1
46dbj|D16458.1|VIREXT5 V.angularis mRNA for endo-xyloglucan transf... 40 4.1 
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA)
          Length = 1174

 Score =  595 bits (300), Expect = e-167
 Identities = 309/312 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    agaacagaacgagatgagacatatattacacacgatctgaacgtgacaaggagcaaacag 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1153 agaacagaacgagatgagacatatattacacacgatctgaacgtgacaaggagcaaacag 1094

                                                                        
Query: 61   aagaatctaccacccgctccatttcacattatcccccctcactggtccttatttatcata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 aagaatctaccacccgctccatttcacattatcccccctcactggtccttatttatcata 1034

                                                                        
Query: 121  cagtacaatacagacgcccccatcttccctatccccggccggcttcctccggcgatcgac 180
            ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 1033 cagtacaatacagacgcccccatcttccctatctccggccgtcttcctccggcgatcgac 974

                                                                        
Query: 181  gtatacacggacggtccaatgctaccttgcttttgatggacggggactacatggagcact 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973  gtatacacggacggtccaatgctaccttgcttttgatggacggggactacatggagcact 914

                                                                        
Query: 241  cggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcatgtaat 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913  cggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcatgtaat 854

                        
Query: 301  tgctctgcaccc 312
            ||||||| ||||
Sbjct: 853  tgctctgtaccc 842
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  119 bits (60), Expect = 6e-24
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                            
Query: 229      acatggagcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgt 288
                ||||||||||||||||||||||||||| || || ||||||||| || |||||||||||||
Sbjct: 28773068 acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgt 28773127

                                        
Query: 289      agatcatgtaattgctctgcaccc 312
                |||||||||| |||||||||||||
Sbjct: 28773128 agatcatgtacttgctctgcaccc 28773151



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                            
Query: 236      gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 295
                |||||||||||||  ||||| || ||  ||||||| ||||||||||||||||||||||||
Sbjct: 28750683 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 28750624

                                 
Query: 296      gtaattgctctgcaccc 312
                | | || ||||||||||
Sbjct: 28750623 gaacttcctctgcaccc 28750607
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>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0028E05
          Length = 157631

 Score =  119 bits (60), Expect = 6e-24
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                         
Query: 229   acatggagcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgt 288
             ||||||||||||||||||||||||||| || || ||||||||| || |||||||||||||
Sbjct: 80843 acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgt 80902

                                     
Query: 289   agatcatgtaattgctctgcaccc 312
             |||||||||| |||||||||||||
Sbjct: 80903 agatcatgtacttgctctgcaccc 80926



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                         
Query: 236   gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 295
             |||||||||||||  ||||| || ||  ||||||| ||||||||||||||||||||||||
Sbjct: 58458 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 58399

                              
Query: 296   gtaattgctctgcaccc 312
             | | || ||||||||||
Sbjct: 58398 gaacttcctctgcaccc 58382
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>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full
           insert sequence
          Length = 1253

 Score =  119 bits (60), Expect = 6e-24
 Identities = 78/84 (92%)
 Strand = Plus / Minus

                                                                       
Query: 229 acatggagcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgt 288
           ||||||||||||||||||||||||||| || || ||||||||| || |||||||||||||
Sbjct: 989 acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgt 930

                                   
Query: 289 agatcatgtaattgctctgcaccc 312
           |||||||||| |||||||||||||
Sbjct: 929 agatcatgtacttgctctgcaccc 906
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>gb|AY023463.1| Oryza sativa microsatellite MRG5788 containing (TCG)X8, closest to
           marker R11, genomic sequence
          Length = 224

 Score =  115 bits (58), Expect = 9e-23
 Identities = 76/82 (92%)
 Strand = Plus / Minus

                                                                       
Query: 229 acatggagcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgt 288
           ||||||||||||||||||||||||||| || || ||||||||| || |||||||||||||
Sbjct: 82  acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgt 23

                                 
Query: 289 agatcatgtaattgctctgcac 310
           |||||||||| |||||||||||
Sbjct: 22  agatcatgtacttgctctgcac 1
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>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein
          Length = 1187

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                       
Query: 236 gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 295
           |||||||||||||| |||||  || |||||||||||||| ||||||||||||||||||||
Sbjct: 975 gcactcggcggggaggccctctgctacgcgcttggggtcggtgcagtagttgtagatcat 916

                            
Query: 296 gtaattgctctgcaccc 312
           | | || ||||||||||
Sbjct: 915 gaacttcctctgcaccc 899
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>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
           (XEB)
          Length = 1226

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                       
Query: 236 gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 295
           |||||||||||| |||||||  || || ||||||||||| ||||||||||||||||||||
Sbjct: 958 gcactcggcgggcacgccctgcgccacccgcttggggtcggtgcagtagttgtagatcat 899

                            
Query: 296 gtaattgctctgcaccc 312
           | | || ||||||||||
Sbjct: 898 gaacttcctctgcaccc 882
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>gb|AY103775.1| Zea mays PCO076979 mRNA sequence
          Length = 1495

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                             
Query: 263 gcgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcaccc 312
           |||||||||||| ||||||||||||||||||||||| |||| ||||||||
Sbjct: 995 gcgcttggggtcggtgcagtagttgtagatcatgtacttgcgctgcaccc 946
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>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence
          Length = 807

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 236 gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 295
           |||||||||||||  ||||| || ||  ||||||| ||||||||||||||||||||||||
Sbjct: 795 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 736

                            
Query: 296 gtaattgctctgcaccc 312
           | | || ||||||||||
Sbjct: 735 gaacttcctctgcaccc 719
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>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA,
           complete cds
          Length = 1056

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 236 gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 295
           ||||||||| || |||||||  || || ||||||||||| ||||||||||||||||||||
Sbjct: 855 gcactcggcaggcacgccctgcgccacccgcttggggtcggtgcagtagttgtagatcat 796

                            
Query: 296 gtaattgctctgcaccc 312
           | | || ||||||||||
Sbjct: 795 gaacttcctctgcaccc 779
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>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0622F03
          Length = 170064

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                          
Query: 236    gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 295
              |||||||||||||  ||||| || ||  ||||||| ||||||||||||||||||||||||
Sbjct: 151249 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 151190

                               
Query: 296    gtaattgctctgcaccc 312
              | | || ||||||||||
Sbjct: 151189 gaacttcctctgcaccc 151173
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>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full
           insert sequence
          Length = 1208

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 236 gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 295
           |||||||||||||  ||||| || ||  ||||||| ||||||||||||||||||||||||
Sbjct: 975 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 916

                            
Query: 296 gtaattgctctgcaccc 312
           | | || ||||||||||
Sbjct: 915 gaacttcctctgcaccc 899
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>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full
           insert sequence
          Length = 1208

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 236 gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 295
           |||||||||||||  ||||| || ||  ||||||| ||||||||||||||||||||||||
Sbjct: 975 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 916

                            
Query: 296 gtaattgctctgcaccc 312
           | | || ||||||||||
Sbjct: 915 gaacttcctctgcaccc 899
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>dbj|AK058291.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E08, full
           insert sequence
          Length = 634

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 236 gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 295
           |||||||||||||  ||||| || ||  ||||||| ||||||||||||||||||||||||
Sbjct: 401 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 342

                            
Query: 296 gtaattgctctgcaccc 312
           | | || ||||||||||
Sbjct: 341 gaacttcctctgcaccc 325
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>gb|AY103891.1| Zea mays PCO065722 mRNA sequence
          Length = 1280

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                       
Query: 236 gcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagatcat 295
           |||||||||||| |||||||  | || |||||||| ||| | ||||||||||||||||||
Sbjct: 995 gcactcggcgggcacgccctgcgggaagcgcttggcgtcggcgcagtagttgtagatcat 936

                            
Query: 296 gtaattgctctgcaccc 312
           | | |||| ||||||||
Sbjct: 935 gaacttgcgctgcaccc 919
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>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence
          Length = 977

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                            
Query: 264 cgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcaccc 312
           ||||||| ||| ||||||||||||||||||||| | || ||||||||||
Sbjct: 263 cgcttggcgtcggtgcagtagttgtagatcatgaacttcctctgcaccc 311
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>gb|AY106776.1| Zea mays PCO076978 mRNA sequence
          Length = 974

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 264 cgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcaccc 312
           ||||||| ||| ||||||||||||||||||||| | || ||||||||||
Sbjct: 941 cgcttggcgtcggtgcagtagttgtagatcatgaacttcctctgcaccc 893
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>gb|AY476737.1| Gossypium hirsutum XET mRNA, partial sequence
          Length = 765

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 264 cgcttggggtcagtgcagtagttgtagatcatgtaatt 301
           ||||||| |||||||||||| ||||| |||||||||||
Sbjct: 519 cgcttggtgtcagtgcagtaattgtaaatcatgtaatt 482
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>gb|DQ100340.1| Eucalyptus globulus putative xyloglucan
           endotransglycosylase/hydrolase (XTH4) mRNA, partial cds
          Length = 608

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 263 gcgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcaccc 312
           |||||||| ||| | |||||||||||| |||||||||||  |||||||||
Sbjct: 398 gcgcttggtgtcggcgcagtagttgtatatcatgtaattcttctgcaccc 349
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>gb|AF223420.1|AF223420 Asparagus officinalis xyloglucan endotransglycosylase XET2 (AoXET2)
           mRNA, complete cds
          Length = 1375

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 272 gtcagtgcagtagttgtagatcatgtaattgctctgcaccc 312
           ||||| ||| ||||||||||||||||||||  |||||||||
Sbjct: 866 gtcagcgcaatagttgtagatcatgtaattcttctgcaccc 826
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>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1181

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 276  gtgcagtagttgtagatcatgtaattgctctgcaccc 312
            ||||||||||||||||||||||  |||| ||||||||
Sbjct: 1061 gtgcagtagttgtagatcatgtggttgcgctgcaccc 1025
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>dbj|AB083025.1| Glycine max mRNA for syringolide-induced protein 19-1-5, complete
           cds
          Length = 1221

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 272 gtcagtgcagtagttgtagatcatgtaattgctctgcaccc 312
           ||||| |||||| |||||||||||||||||  |||||||||
Sbjct: 913 gtcagagcagtaattgtagatcatgtaattcttctgcaccc 873
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>emb|AJ555155.1|CSA555155 Cucumis sativus XTH3 gene for putative xyloglucan
            endotransglycosylase, exons 1-3, clone 4
          Length = 3074

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 272  gtcagtgcagtagttgtagatcatgta 298
            |||||||||||| ||||||||||||||
Sbjct: 2636 gtcagtgcagtaattgtagatcatgta 2610
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>emb|AJ555126.1|CSA555126 Cucumis sativus mRNA for putative xyloglucan endotransglycosylase
           (xth3 gene)
          Length = 1038

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 272 gtcagtgcagtagttgtagatcatgta 298
           |||||||||||| ||||||||||||||
Sbjct: 846 gtcagtgcagtaattgtagatcatgta 820
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>gb|AY105365.1| Zea mays PCO092487 mRNA sequence
          Length = 1253

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 276 gtgcagtagttgtagatcatgta 298
           |||||||||||||||||||||||
Sbjct: 898 gtgcagtagttgtagatcatgta 876
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>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete
           cds
          Length = 1827

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 276 gtgcagtagttgtagatcatgta 298
           |||||||||||||||||||||||
Sbjct: 913 gtgcagtagttgtagatcatgta 891
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>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete
           cds
          Length = 1221

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 276 gtgcagtagttgtagatcatgta 298
           |||||||||||||||||||||||
Sbjct: 905 gtgcagtagttgtagatcatgta 883
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>ref|XM_473787.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 882

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 277 tgcagtagttgtagatcatgta 298
           ||||||||||||||||||||||
Sbjct: 829 tgcagtagttgtagatcatgta 808
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>gb|AY365421.1| Sesamum indicum xyloglucan endotransglycosylase mRNA, partial cds
          Length = 494

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 276 gtgcagtagttgtagatcatgt 297
           ||||||||||||||||||||||
Sbjct: 491 gtgcagtagttgtagatcatgt 470
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>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
           (PM5)
          Length = 1188

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                       
Query: 233 ggagcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagat 292
           ||||||||||||||||| ||| |||| || ||||  |  ||| |||||||||| ||||  
Sbjct: 904 ggagcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgtagga 845

                         
Query: 293 catgtaattgctct 306
           |||||| |||||||
Sbjct: 844 catgtacttgctct 831
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>gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase (XET01) mRNA,
           complete cds
          Length = 1268

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 271 ggtcagtgcagtagttgtagat 292
           ||||||||||||||||||||||
Sbjct: 889 ggtcagtgcagtagttgtagat 868
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>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02,
              complete sequence
          Length = 166804

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 277    tgcagtagttgtagatcatgta 298
              ||||||||||||||||||||||
Sbjct: 141164 tgcagtagttgtagatcatgta 141185
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>emb|AJ130885.1|FSY130885 Fagus sylvatica mRNA for xyloglucan endotransglycosylase 1
          Length = 1223

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 263 gcgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcaccc 312
           |||||||| ||| ||||| ||||| || |||||||||||  |||||||||
Sbjct: 874 gcgcttggtgtctgtgcaatagttataaatcatgtaatttttctgcaccc 825
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 277      tgcagtagttgtagatcatgta 298
                ||||||||||||||||||||||
Sbjct: 30507787 tgcagtagttgtagatcatgta 30507808
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>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full
           insert sequence
          Length = 1041

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 277 tgcagtagttgtagatcatgta 298
           ||||||||||||||||||||||
Sbjct: 892 tgcagtagttgtagatcatgta 871
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>gb|AY841854.1| Vigna radiata xyloglucan endotransglucosylase/hydrolase precursor
           (XTH1) mRNA, complete cds
          Length = 1112

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 272 gtcagtgcagtagttgtagat 292
           |||||||||||||||||||||
Sbjct: 813 gtcagtgcagtagttgtagat 793
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>gb|BC090193.1| Xenopus laevis cDNA clone MGC:85054 IMAGE:6327047, complete cds
          Length = 1785

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 103  tggtccttatttatcatacag 123
            |||||||||||||||||||||
Sbjct: 1462 tggtccttatttatcatacag 1442
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>dbj|AB086396.1| Vigna angularis VaXTH2 gene for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1712

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 272  gtcagtgcagtagttgtagat 292
            |||||||||||||||||||||
Sbjct: 1450 gtcagtgcagtagttgtagat 1430
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>gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase hydrolase mRNA,
           complete cds
          Length = 1130

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 272 gtcagtgcagtagttgtagat 292
           |||||||||||||||||||||
Sbjct: 872 gtcagtgcagtagttgtagat 852
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>dbj|D16455.1|SOYEXT2 Soybean mRNA for endo-xyloglucan transferase, partial cds
          Length = 975

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 272 gtcagtgcagtagttgtagat 292
           |||||||||||||||||||||
Sbjct: 833 gtcagtgcagtagttgtagat 813
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>emb|AL590111.14| Human DNA sequence from clone RP11-570F3 on chromosome 10 Contains
            part of a novel gene (FLJ30499) and the 3' end of a novel
            gene (FLJ30450), complete sequence
          Length = 41069

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   ctcactggtccttatttatc 117
            ||||||||||||||||||||
Sbjct: 3262 ctcactggtccttatttatc 3243
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>emb|BX571768.19| Zebrafish DNA sequence from clone DKEYP-2C4 in linkage group 11,
             complete sequence
          Length = 111222

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   tatttatcatacagtacaat 129
             ||||||||||||||||||||
Sbjct: 36635 tatttatcatacagtacaat 36616
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>gb|AC148685.1| Macaca mulatta Major Histocompatibility Complex BAC MMU188J04, complete
             sequence
          Length = 166821

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   gggactacatggagcactcg 242
             ||||||||||||||||||||
Sbjct: 22059 gggactacatggagcactcg 22040
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>dbj|AB086395.1| Vigna angularis VaXTH1 gene for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1913

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  tcagtgcagtagttgtagat 292
            ||||||||||||||||||||
Sbjct: 1610 tcagtgcagtagttgtagat 1591
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>gb|L46792.1|ACTXET Actinidia deliciosa clone AdXET-5 xyloglucan endotransglycosylase
           precursor (XET) mRNA, complete cds
          Length = 1178

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 tcagtgcagtagttgtagat 292
           ||||||||||||||||||||
Sbjct: 858 tcagtgcagtagttgtagat 839
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>dbj|D16458.1|VIREXT5 V.angularis mRNA for endo-xyloglucan transferase, complete cds
          Length = 1319

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 tcagtgcagtagttgtagat 292
           ||||||||||||||||||||
Sbjct: 999 tcagtgcagtagttgtagat 980


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,183,046
Number of Sequences: 3902068
Number of extensions: 2183046
Number of successful extensions: 36713
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 36618
Number of HSP's gapped (non-prelim): 96
length of query: 312
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 290
effective length of database: 17,147,199,772
effective search space: 4972687933880
effective search space used: 4972687933880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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