ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet33h04 |
|---|---|
| Clone Library Name | barley_pub |
>INV1_MAIZE (P49175) Beta-fructofuranosidase 1 precursor (EC 3.2.1.26) (Sucrose| 1) (Invertase 1) Length = 670 Score = 65.5 bits (158), Expect = 5e-11 Identities = 32/59 (54%), Positives = 43/59 (72%) Frame = -3 Query: 418 ESFAMGGRSTVTSRVYPTEAIYANAGVYLFNNATGARVTVTSLVAHEMDSSYNQAYVAS 242 ESFA GGR+ +TSRVYPT AIY +A V+LFNNAT A V S+ +++S+Y + Y A+ Sbjct: 608 ESFAQGGRTCITSRVYPTRAIYDSARVFLFNNATHAHVKAKSVKIWQLNSAYIRPYPAT 666
>INVB_DAUCA (P80065) Beta-fructofuranosidase, soluble isoenzyme I precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) (Saccharase) Length = 661 Score = 61.6 bits (148), Expect = 7e-10 Identities = 32/51 (62%), Positives = 39/51 (76%) Frame = -3 Query: 418 ESFAMGGRSTVTSRVYPTEAIYANAGVYLFNNATGARVTVTSLVAHEMDSS 266 ESFA GGR+ +TSRVYPT AIY+ A V+LFNNATG VT S+ A +M S+ Sbjct: 602 ESFAQGGRTVITSRVYPTRAIYSAARVFLFNNATGVSVT-ASVKAWQMASA 651
>INVA_PHAAU (P29001) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) [Contains: Acid beta-fructofuranosidase 30 kDa subunit; Acid beta-fructofuranosidase 38 kDa subunit] Length = 649 Score = 60.8 bits (146), Expect = 1e-09 Identities = 32/52 (61%), Positives = 40/52 (76%) Frame = -3 Query: 418 ESFAMGGRSTVTSRVYPTEAIYANAGVYLFNNATGARVTVTSLVAHEMDSSY 263 ESFA GGR+ VTSRVYPT+AIY A ++LFNNAT A VT SL +M+S++ Sbjct: 587 ESFAQGGRTCVTSRVYPTKAIYGAARLFLFNNATEATVT-ASLKVWQMNSAF 637
>INVA_PHAVU (O24509) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 651 Score = 60.5 bits (145), Expect = 2e-09 Identities = 32/52 (61%), Positives = 40/52 (76%) Frame = -3 Query: 418 ESFAMGGRSTVTSRVYPTEAIYANAGVYLFNNATGARVTVTSLVAHEMDSSY 263 ESFA GGR+ VTSRVYPT+AIY A ++LFNNAT A VT SL +M+S++ Sbjct: 589 ESFAQGGRTCVTSRVYPTKAIYGAARLFLFNNATEATVT-ASLKIWQMNSAF 639
>INVA_VICFA (Q43857) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 642 Score = 58.2 bits (139), Expect = 8e-09 Identities = 30/56 (53%), Positives = 39/56 (69%) Frame = -3 Query: 418 ESFAMGGRSTVTSRVYPTEAIYANAGVYLFNNATGARVTVTSLVAHEMDSSYNQAY 251 ESFA GGR+ +TSRVYPT AIY A ++LFNNA VT SL +M+S++ + Y Sbjct: 579 ESFAQGGRTCITSRVYPTRAIYGAARLFLFNNAIETNVT-ASLKVWQMNSAFIRPY 633
>INVA_LYCES (P29000) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 636 Score = 55.8 bits (133), Expect = 4e-08 Identities = 24/41 (58%), Positives = 33/41 (80%) Frame = -3 Query: 418 ESFAMGGRSTVTSRVYPTEAIYANAGVYLFNNATGARVTVT 296 ESFA GGR+ +TSR+YPT+A+ A +++FNNATGA VT + Sbjct: 577 ESFAQGGRTVITSRIYPTKAVNGAARLFVFNNATGASVTAS 617
>INV1_CAPAN (P93761) Acid beta-fructofuranosidase AIV-18 (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) Length = 640 Score = 55.1 bits (131), Expect = 7e-08 Identities = 24/41 (58%), Positives = 33/41 (80%) Frame = -3 Query: 418 ESFAMGGRSTVTSRVYPTEAIYANAGVYLFNNATGARVTVT 296 ESFA GGR+ +TSR+YPT+A+ A +++FNNATGA VT + Sbjct: 581 ESFAQGGRTVITSRIYPTKAVNGAARLFVFNNATGAIVTAS 621
>INV2_DAUCA (Q39692) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor| (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell wall beta-fructosidase 2) Length = 592 Score = 50.1 bits (118), Expect = 2e-06 Identities = 27/48 (56%), Positives = 33/48 (68%) Frame = -3 Query: 418 ESFAMGGRSTVTSRVYPTEAIYANAGVYLFNNATGARVTVTSLVAHEM 275 ESF GR+ +TSRVYP AIY NA V++FNN T A +T+ SL A M Sbjct: 537 ESFGAHGRTCITSRVYPKIAIYNNAHVFVFNNGTEA-ITIDSLDAWSM 583
>INV1_DAUCA (P26792) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor| (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) Length = 592 Score = 46.2 bits (108), Expect = 3e-05 Identities = 23/48 (47%), Positives = 33/48 (68%) Frame = -3 Query: 418 ESFAMGGRSTVTSRVYPTEAIYANAGVYLFNNATGARVTVTSLVAHEM 275 ESF G++ ++SRVYPT A+Y NA +Y+FNN + +TV +L A M Sbjct: 539 ESFGAKGKTCISSRVYPTLAVYENAHLYVFNNGS-ETITVENLDAWSM 585
>INV2_ORYSA (Q56UD4) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor| (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell wall beta-fructosidase 2) (OsCIN2) Length = 598 Score = 46.2 bits (108), Expect = 3e-05 Identities = 24/48 (50%), Positives = 32/48 (66%) Frame = -3 Query: 418 ESFAMGGRSTVTSRVYPTEAIYANAGVYLFNNATGARVTVTSLVAHEM 275 ESF GG++ + SRVYP+ AI NA +Y+FNN A + V+ L A EM Sbjct: 543 ESFGAGGKACILSRVYPSLAIGKNARLYVFNNGK-AEIKVSQLTAWEM 589
>INV5_ORYSA (Q56UD1) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC| 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) Length = 526 Score = 45.8 bits (107), Expect = 4e-05 Identities = 23/48 (47%), Positives = 33/48 (68%) Frame = -3 Query: 418 ESFAMGGRSTVTSRVYPTEAIYANAGVYLFNNATGARVTVTSLVAHEM 275 ESF GGR+ +T+RVYP A +++ +Y+FNN +G V V+ L A EM Sbjct: 463 ESFGGGGRACITTRVYPEHAATSSSHLYVFNNGSGT-VNVSKLEAWEM 509
>INV3_DAUCA (Q39693) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) Length = 583 Score = 44.7 bits (104), Expect = 9e-05 Identities = 24/50 (48%), Positives = 34/50 (68%) Frame = -3 Query: 418 ESFAMGGRSTVTSRVYPTEAIYANAGVYLFNNATGARVTVTSLVAHEMDS 269 ESF ++ ++SRVYPT AIY NA +++FNN T +TV +L A M+S Sbjct: 530 ESFGAQRKNLISSRVYPTLAIYNNAHLFVFNNGT-EPITVDNLDAWSMNS 578
>INVA_MAIZE (P49174) Beta-fructofuranosidase, cell wall isozyme precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) Length = 590 Score = 44.3 bits (103), Expect = 1e-04 Identities = 23/48 (47%), Positives = 32/48 (66%) Frame = -3 Query: 418 ESFAMGGRSTVTSRVYPTEAIYANAGVYLFNNATGARVTVTSLVAHEM 275 ESF GG++ + SRVYP+ A+ +A +Y+FNN VTV+ L A EM Sbjct: 536 ESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGE-VDVTVSGLTAWEM 582
>INV6_ORYSA (Q56UD0) Beta-fructofuranosidase, insoluble isoenzyme 6 precursor| (EC 3.2.1.26) (Sucrose hydrolase 6) (Invertase 6) (Cell wall beta-fructosidase 6) (OsCIN6) Length = 596 Score = 42.0 bits (97), Expect = 6e-04 Identities = 22/48 (45%), Positives = 32/48 (66%) Frame = -3 Query: 418 ESFAMGGRSTVTSRVYPTEAIYANAGVYLFNNATGARVTVTSLVAHEM 275 ESF GGR+ +T+RVYP ++ +Y+FNNA+ A V V+ L A E+ Sbjct: 525 ESFGGGGRTCMTARVYPEHVATGSSHLYVFNNASDA-VKVSKLEAWEL 571
>INV1_ORYSA (Q6EU76) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor| (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) (OsCIN1) Length = 577 Score = 41.6 bits (96), Expect = 8e-04 Identities = 22/48 (45%), Positives = 31/48 (64%) Frame = -3 Query: 418 ESFAMGGRSTVTSRVYPTEAIYANAGVYLFNNATGARVTVTSLVAHEM 275 ESF GG++ + SRVYP+ AI A +Y+FNN A + ++ L A EM Sbjct: 523 ESFGAGGKTCILSRVYPSMAIGDKAHLYVFNNGE-ADIKISHLKAWEM 569
>INV7_ORYSA (Q56UC9) Beta-fructofuranosidase, insoluble isoenzyme 7 precursor| (EC 3.2.1.26) (Sucrose hydrolase 7) (Invertase 7) (Cell wall beta-fructosidase 7) (OsCIN7) Length = 596 Score = 40.0 bits (92), Expect = 0.002 Identities = 20/48 (41%), Positives = 31/48 (64%) Frame = -3 Query: 418 ESFAMGGRSTVTSRVYPTEAIYANAGVYLFNNATGARVTVTSLVAHEM 275 ESF GGR+ +T+RVYP +++ +Y+FNN + A V V L A ++ Sbjct: 521 ESFGGGGRACITARVYPEHVATSSSHLYVFNNGSDA-VKVAKLEAWDL 567
>INV3_ORYSA (Q56UD3) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) (OsCIN3) Length = 586 Score = 37.7 bits (86), Expect = 0.011 Identities = 20/48 (41%), Positives = 32/48 (66%) Frame = -3 Query: 418 ESFAMGGRSTVTSRVYPTEAIYANAGVYLFNNATGARVTVTSLVAHEM 275 ESF G++ + +RVYP +A+ +A +++FNN + V VT+L A EM Sbjct: 531 ESFGARGKTCILTRVYPRKAVGDDAHLFVFNNGE-SDVKVTNLDAWEM 577
>INV4_ORYSA (Q5JJV0) Beta-fructofuranosidase, insoluble isoenzyme 4 precursor| (EC 3.2.1.26) (Sucrose hydrolase 4) (Invertase 4) (Cell wall beta-fructosidase 4) (OsCIN4) Length = 590 Score = 35.8 bits (81), Expect = 0.042 Identities = 19/48 (39%), Positives = 27/48 (56%) Frame = -3 Query: 418 ESFAMGGRSTVTSRVYPTEAIYANAGVYLFNNATGARVTVTSLVAHEM 275 ESF GGR+ + +RVYP + +Y FNN + + V V+ L A M Sbjct: 534 ESFGGGGRACIMARVYPAAVVDGATHMYAFNNGS-STVKVSQLKAWSM 580
>INV1_PEA (Q43089) Beta-fructofuranosidase, cell wall isozyme precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Acid invertase) Length = 555 Score = 30.8 bits (68), Expect = 1.4 Identities = 15/25 (60%), Positives = 18/25 (72%) Frame = -3 Query: 418 ESFAMGGRSTVTSRVYPTEAIYANA 344 ESF GR+ VT+RVYPT AI+ A Sbjct: 523 ESFGGEGRACVTARVYPTLAIHDKA 547
>PLMN_BOVIN (P06868) Plasminogen precursor (EC 3.4.21.7) [Contains: Plasmin| heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B] Length = 812 Score = 30.0 bits (66), Expect = 2.3 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = -2 Query: 392 HGDVTGVSDRGHLCQRWGVPLQQRHRR 312 +G V++ GH CQRW +H R Sbjct: 290 YGGTVAVTESGHTCQRWSEQTPHKHNR 316
>SALL4_HUMAN (Q9UJQ4) Sal-like protein 4 (Zinc finger protein SALL4)| Length = 1053 Score = 28.9 bits (63), Expect = 5.2 Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = +2 Query: 116 MNRHNKNEKGNKDSGSEEKIRKEITHIC--ICYQKNDLSVFILHR 244 +N +E ++D + +++R+E TH+C C + +S F+ H+ Sbjct: 47 VNHPGNDEVASEDEATVKRLRREETHVCEKCCAEFFSISEFLEHK 91
>CP2K4_ONCMY (O93297) Cytochrome P450 2K4 (EC 1.14.14.1) (CYPIIK4)| Length = 504 Score = 28.9 bits (63), Expect = 5.2 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 4/86 (4%) Frame = +2 Query: 128 NKNEKGNKDSGSEEKIRKEITHICICYQKNDLSVF----ILHRXXXXXXXXXXXXXXXEA 295 N + G GSEEKI +EI ++ +K++ F +H E Sbjct: 142 NLRDFGMGKKGSEEKILEEIPYLIEVLEKHEGKAFDTTQSVHHAVSNIISAIVYGSRFE- 200 Query: 296 GYSDPGAGGVVEEVHPSVGIDGLGRI 373 Y+DP G+V+ V+ +V + G I Sbjct: 201 -YTDPLFTGMVDRVNENVHLIGSASI 225
>AP2B_HUMAN (Q92481) Transcription factor AP-2 beta (AP2-beta) (Activating| enhancer-binding protein 2 beta) Length = 449 Score = 28.9 bits (63), Expect = 5.2 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Frame = +2 Query: 35 CSTYTALALHIMAXXXXXXXXFWKTLTMNRHNKNE-KGNKDSGSEEKIRK 181 C+ TAL ++ F T NRH E G+K EEK RK Sbjct: 400 CAALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK 449
>AP2B_CANFA (Q76HI7) Transcription factor AP-2 beta (AP2-beta) (Activating| enhancer-binding protein 2 beta) Length = 449 Score = 28.9 bits (63), Expect = 5.2 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Frame = +2 Query: 35 CSTYTALALHIMAXXXXXXXXFWKTLTMNRHNKNE-KGNKDSGSEEKIRK 181 C+ TAL ++ F T NRH E G+K EEK RK Sbjct: 400 CAALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK 449
>AFAM_MOUSE (O89020) Afamin precursor (Alpha-albumin) (Alpha-Alb)| Length = 611 Score = 28.9 bits (63), Expect = 5.2 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 3/84 (3%) Frame = +3 Query: 144 ETKIAGVRRKSERKLHIYVYAI-KKMIFLFSFYIEAT*AWL*EESISWA--TRLVTVTRA 314 E K + KSE LH+Y+Y + ++ F+F+ + A AW E + + + T +A Sbjct: 145 EEKCQAYKNKSESFLHLYMYEVARRNPFVFAPVLLAVAAWFEEAATTCCEQQQKATCFQA 204 Query: 315 PVALLKRYTPALA*MASVGYTRDV 386 A + +Y AS Y R+V Sbjct: 205 KAAPITQYL-----KASSSYQRNV 223
>NDUAC_HUMAN (Q9UI09) NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit| 12 (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase subunit B17.2) (Complex I-B17.2) (CI-B17.2) (CIB17.2) (13 kDa differentiation-associated protein) Length = 145 Score = 28.1 bits (61), Expect = 8.8 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 3/24 (12%) Frame = +1 Query: 340 PQRWHRWPRS---DTPVTSPWTSR 402 P WHRW S D P T P T+R Sbjct: 83 PPEWHRWLHSMTDDPPTTKPLTAR 106
>OR74A_DROME (Q9VVF3) Putative odorant receptor 74a| Length = 404 Score = 28.1 bits (61), Expect = 8.8 Identities = 21/74 (28%), Positives = 33/74 (44%) Frame = -3 Query: 361 AIYANAGVYLFNNATGARVTVTSLVAHEMDSSYNQAYVASM*NENRKIIFLIAYTYMCNF 182 A N+ VYL V VT+++ H + Y Q Y +N ++ F I + NF Sbjct: 137 ATRVNSTVYLLALLNFFLVPVTNVIYHRREMLYKQVYPF----DNTQLHFFIPLLVL-NF 191 Query: 181 LSDFLLTPAIFVSL 140 F++T +F L Sbjct: 192 WVGFIITSMLFGEL 205
>PPO_MALDO (P43309) Polyphenol oxidase, chloroplast precursor (EC 1.10.3.1)| (PPO) (Catechol oxidase) Length = 593 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Frame = -2 Query: 215 FFDSIYIYV*FP-F*FSPHSRYLCFPFHFYYVY 120 + D Y V FP H+ +L FPFH YY+Y Sbjct: 178 YCDGAYDQVGFPELELQIHNSWLFFPFHRYYLY 210 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,683,001 Number of Sequences: 219361 Number of extensions: 863539 Number of successful extensions: 2143 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 2099 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2139 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
