>PME2_CITSI (O04887) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE)
          Length = 510

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
 Frame = -3

Query: 341 YGNEGPGAGTNGRVGWAGFHEM-GYDEAAQFAVDKFIYGDDWLAATSFPYDQGI 183
           Y N GPG+ T  RV W G+H +    + +QF V  FI G+ WL AT+ P+  G+
Sbjct: 457 YMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 510

>PME1_CITSI (O04886) Pectinesterase-1 precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE)
          Length = 584

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -3

Query: 335 NEGPGAGTNGRVGWAGFHEM-GYDEAAQFAVDKFIYGDDWLAATSFPYDQGI 183
           N G GAGT+GRV W GF  +    EA  F    FI G  WL +T FP+  G+
Sbjct: 533 NSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584

>PME1_FICAW (P83947) Pectinesterase precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE)
          Length = 545

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = -3

Query: 341 YGNEGPGAGTNGRVGWAGFHEMGYDEAA-QFAVDKFIYGDDWLAATSFPYDQGI 183
           Y N GPG+GT+ RV W G+H +   E A QF V + I G  WL +T   Y  G+
Sbjct: 490 YRNGGPGSGTSERVKWPGYHVITSPEVAEQFTVAELIQGGSWLGSTGVDYTAGL 543

>PME3_CITSI (P83948) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin|
           methylesterase 3) (PE 3)
          Length = 584

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -3

Query: 335 NEGPGAGTNGRVGWAGFHEM-GYDEAAQFAVDKFIYGDDWLAATSFPYDQGI 183
           N G GAGT+GRV W GF  +    EA  F    FI G  WL +T FP+  G+
Sbjct: 533 NAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584

>PME_DAUCA (P83218) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE)|
          Length = 319

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 25/54 (46%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -3

Query: 341 YGNEGPGAGTNGRVGWAGFHEMGYDEAAQ-FAVDKFIYGDDWLAATSFPYDQGI 183
           Y N G GA T+GRV W GF  +     AQ F    FI G  WL AT+FP+  G+
Sbjct: 266 YQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL 319

>PME3_LYCES (Q96576) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin|
           methylesterase 3) (PE 3)
          Length = 544

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = -3

Query: 335 NEGPGAGTNGRVGWAGFHEM-GYDEAAQFAVDKFIYGDDWLAATSFPYDQGI 183
           N GPGAGT+ RV W G+H +   +EA  F V + I G  WL +TS  Y +G+
Sbjct: 491 NNGPGAGTSKRVKWPGYHVITDPNEAMPFTVAELIQGGSWLNSTSVAYVEGL 542

>PME21_LYCES (P09607) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin|
           methylesterase 2) (PE 2)
          Length = 550

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -3

Query: 335 NEGPGAGTNGRVGWAGFHEM-GYDEAAQFAVDKFIYGDDWLAATSFPYDQGI 183
           N GPGAGT+ RV W G+H +    EA  F V K I G  WL +T   Y  G+
Sbjct: 497 NNGPGAGTSKRVKWPGYHVITDPAEAMSFTVAKLIQGGSWLRSTDVAYVDGL 548

>PME2_ARATH (Q42534) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin|
           methylesterase 2) (PE 2)
          Length = 587

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = -3

Query: 341 YGNEGPGAGTNGRVGWAGFHEMGYDEAAQ-FAVDKFIYGDDWLAATSFPY 195
           Y N G GAGT  RV W G+  +  D  AQ F   +FI G  WLA+T FP+
Sbjct: 534 YLNRGGGAGTANRVKWKGYKVITSDTEAQPFTAGQFIGGGGWLASTGFPF 583

>PME22_LYCES (Q96575) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin|
           methylesterase 2) (PE 2)
          Length = 550

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -3

Query: 335 NEGPGAGTNGRVGWAGFHEM-GYDEAAQFAVDKFIYGDDWLAATSFPYDQGI 183
           N GPGAGT+ RV W G+H +    EA  F V K I G  WL +T   Y  G+
Sbjct: 497 NNGPGAGTSKRVKWPGYHCITDPAEAMPFTVAKLIQGGSWLRSTGVAYVDGL 548

>PMEU1_LYCES (Q43143) Pectinesterase U1 precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE)
          Length = 583

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -3

Query: 341 YGNEGPGAGTNGRVGWAGFHEM-GYDEAAQFAVDKFIYGDDWLAATSFPYDQGI 183
           Y N G GA T+GRV W G   +    EA  +   +FI G  WL++T FP+  G+
Sbjct: 530 YANTGAGAPTSGRVKWKGHKVITSSTEAQAYTPGRFIAGGSWLSSTGFPFSLGL 583

>PME1_LYCES (P14280) Pectinesterase-1 precursor (EC 3.1.1.11) (Pectin|
           methylesterase 1) (PE 1)
          Length = 546

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -3

Query: 335 NEGPGAGTNGRVGWAGFHEM-GYDEAAQFAVDKFIYGDDWLAATSFPYDQGI 183
           N GPGAGT+ RV W G+H +    +A  F V K I G  WL +T   Y  G+
Sbjct: 493 NNGPGAGTSKRVKWPGYHVITDPAKAMPFTVAKLIQGGSWLRSTGVAYVDGL 544

>PME1_ARATH (Q43867) Pectinesterase-1 precursor (EC 3.1.1.11) (Pectin|
           methylesterase 1) (PE 1)
          Length = 586

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = -3

Query: 341 YGNEGPGAGTNGRVGWAGFHEMGYD-EAAQFAVDKFIYGDDWLAAT 207
           Y N GPG+    RV WAG+  +  D EAA+F V   ++G DW+ AT
Sbjct: 534 YKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPAT 579

>PME3_PHAVU (Q43111) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin|
           methylesterase 3) (PE 3)
          Length = 581

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -3

Query: 341 YGNEGPGAGTNGRVGWAGFHEMGYD-EAAQFAVDKFIYGDDWLAATSFPYD 192
           Y N GPGA  + RV WAG+     D  A +F V  FI G +WL   +  +D
Sbjct: 528 YQNSGPGADVSQRVKWAGYKPTITDRNAEEFTVQSFIQGPEWLPNAAVQFD 578

>PME_PETIN (Q43043) Pectinesterase precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE)
          Length = 374

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = -3

Query: 341 YGNEGPGAGTNGRVGWAGFHEMGYDEAAQ-FAVDKFIYGDD-WLAATSFPYDQGI 183
           Y N GPGA  + R+ W GF +    EAAQ F    +I  D+ WL   + PY+ G+
Sbjct: 317 YQNRGPGAALDKRITWKGFQKGFTGEAAQKFTAGVYINNDENWLQKANVPYEAGM 371

>PME_PRUPE (Q43062) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE)
          Length = 522

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -3

Query: 341 YGNEGPGAGTNGRVGWAGFHEMGYD-EAAQFAVDKFIYGDDWLAATSFPY 195
           Y N GPGAG   RV W G+       +A  + V +FI G+ WL +T   Y
Sbjct: 467 YMNYGPGAGLGSRVKWPGYQVFNESTQAKNYTVAQFIEGNLWLPSTGVKY 516

>PME_MEDSA (Q42920) Pectinesterase precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE) (P65)
          Length = 447

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
 Frame = -3

Query: 341 YGNEGPGAGTNGRVGWAGFHEMGYDEAAQFAVDKFI------YGDDWLAATSFPYDQG 186
           Y N+GPGA TN RV W G   +  + AA++   KF         D W+  +  PY  G
Sbjct: 388 YNNKGPGADTNLRVKWHGVKVLTSNVAAEYYPGKFFEIVNATARDTWIVKSGVPYSLG 445

>PME_BRANA (P41510) Probable pectinesterase precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE)
          Length = 584

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -3

Query: 341 YGNEGPGAGTNGRVGWAGFHEMGYDEAAQFAVDKFIYGDDWLAATSFPYDQGI 183
           + N GPGA T  RV WA   +    E  +F V  ++   +W+   + P   G+
Sbjct: 533 FNNRGPGANTAARVPWAKMAKSA-AEVERFTVANWLTPANWIQEANVPVQLGL 584

>PME5_ARATH (Q5MFV8) Pectinesterase-5 precursor (EC 3.1.1.11) (Pectin|
           methylesterase 5) (PE 5) (VANGUARD 1 protein)
          Length = 595

 Score = 32.0 bits (71), Expect = 0.39
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = -3

Query: 341 YGNEGPGAGTNGRVGWAGFHEMGYDEAAQFAVDKFIYGDDWLAATSFPYDQGI 183
           Y N GPGA TN RV W         E   F V  ++   +W+   + P   G+
Sbjct: 544 YNNRGPGAITNRRVNWVKIARSA-AEVNDFTVANWLGPINWIQEANVPVTLGL 595

>DOF33_ARATH (Q8LFV3) Dof zinc finger protein DOF3.3 (AtDOF3.3) (H-protein|
           promoter-binding factor 2a)
          Length = 448

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 274 PISWNPAQPTRPFVPAPG---PSFPY 342
           P +WNPA P   F P PG   P +PY
Sbjct: 296 PYTWNPAMPPPGFYPPPGYPMPFYPY 321

>PME4_ARATH (O80722) Pectinesterase-4 precursor (EC 3.1.1.11) (Pectin|
           methylesterase 4) (PE 4) (VANGUARD1-like protein 1)
           (VGD1-like protein 1) (AtPME4)
          Length = 588

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 16/53 (30%), Positives = 22/53 (41%)
 Frame = -3

Query: 341 YGNEGPGAGTNGRVGWAGFHEMGYDEAAQFAVDKFIYGDDWLAATSFPYDQGI 183
           Y N GPGA  N RV WA        E   F    ++   +W+   + P   G+
Sbjct: 537 YNNRGPGAFANRRVNWAKVARSA-AEVNGFTAANWLGPINWIQEANVPVTIGL 588

>FTSK_SALTI (Q8Z814) DNA translocase ftsK|
          Length = 1343

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 9/37 (24%)
 Frame = +1

Query: 247 TANWAASS*PISWNP---------AQPTRPFVPAPGP 330
           T  WAAS+ PI   P         AQPT  + P PGP
Sbjct: 328 TQTWAASADPIMQTPPMPGAEPVVAQPTVEWQPVPGP 364

>FTSK_SALTY (Q8ZQD5) DNA translocase ftsK|
          Length = 1351

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 9/37 (24%)
 Frame = +1

Query: 247 TANWAASS*PISWNP---------AQPTRPFVPAPGP 330
           T  WAAS+ PI   P         AQPT  + P PGP
Sbjct: 328 TQTWAASADPIMQTPPMPGAEPVVAQPTVEWQPVPGP 364

>KBTBB_HUMAN (O94819) Kelch repeat and BTB domain-containing protein 11 (Kelch|
           domain-containing protein 7B)
          Length = 623

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 24/60 (40%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
 Frame = +1

Query: 169 PRVVQMPWS*GKEVAASQ---SSP*MNLSTANWAASS*-PISW--NPAQPTRPFVPAPGP 330
           PRVV+  W  G   AAS    +SP         AA S  P  W  +PA P  P  PAP P
Sbjct: 71  PRVVERQWEAGSAGAASPEELASPEERACPEEPAAPSPEPRVWLEDPASPEEPGEPAPVP 130

>SCNAA_RABIT (O97741) Amiloride-sensitive sodium channel alpha-subunit|
           (Epithelial Na+ channel alpha subunit) (Alpha ENaC)
           (Nonvoltage-gated sodium channel 1 alpha subunit)
           (SCNEA) (Alpha NaCH)
          Length = 640

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = +1

Query: 226 SP*MNLSTANWAASS*PISWNPAQ----PTRPFVPAPGPSFP 339
           SP      A   ASS P+S  P++    PT P VP PGP+ P
Sbjct: 571 SPGRGAGGAREVASS-PVSALPSRFCPHPTSPSVPQPGPTLP 611

>IRS1_XENTR (Q6P4Y6) Insulin receptor substrate 1 (IRS-1)|
          Length = 654

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
 Frame = +1

Query: 163 CRPRVVQMPWS*GKEVAA----SQSSP*MNLSTANWAASS*PISWNPAQPTRPFVPAPG 327
           C P + ++ W   +EV+A    S +S  MN+ + + +ASS P       P   F+ +PG
Sbjct: 439 CSPEIERLSWPPSQEVSAGSSDSHASDYMNMWSLSRSASSTP------PPQEAFLSSPG 491

>NODM1_RHIME (Q92ZK3) Glucosamine--fructose-6-phosphate aminotransferase|
           [isomerizing] (EC 2.6.1.16) (GFAT) (Nodulation protein
           M)
          Length = 607

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -2

Query: 123 SGEMFSKFC*IRLCHEHNIQLNQMIFGSVKT*ACNQSAVFP 1
           SGE       +R C EH +++  ++     T A    AVFP
Sbjct: 346 SGETADTLASLRYCKEHGLKIGAVVNARESTIARESDAVFP 386

>GLMS_RHIME (Q92PS4) Glucosamine--fructose-6-phosphate aminotransferase|
           [isomerizing] (EC 2.6.1.16) (Hexosephosphate
           aminotransferase) (D-fructose-6-phosphate
           amidotransferase) (GFAT)
           (L-glutamine-D-fructose-6-phosphate amidotransferase)
           (Glucosamine-6-ph
          Length = 607

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -2

Query: 123 SGEMFSKFC*IRLCHEHNIQLNQMIFGSVKT*ACNQSAVFP 1
           SGE       +R C EH +++  ++     T A    AVFP
Sbjct: 346 SGETADTLASLRYCKEHGLKIGAVVNARESTIARESDAVFP 386

>PME_BRACM (Q42608) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE)|
           (Fragment)
          Length = 571

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = -3

Query: 341 YGNEGPGAGTNGRVGWAGFHEMGYDEAAQFAVDKFIYGDDWLAATSFPYDQGI 183
           + N GPGA    RV WA   +    E  +F V  ++   +W+   +     G+
Sbjct: 520 FNNRGPGANPAARVPWAKMAKSA-AEVERFTVANWLTPANWIQEANVTVQLGL 571

>Y3030_RALSO (Q8XV02) Hypothetical UPF0192 protein RSc3030 precursor|
          Length = 1582

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
 Frame = -3

Query: 320  AGTNGRVGWAGFHEMGYDEAAQFAVDKFIYGDDWLAA----TSFPYDQGI*TTRGLQNSE 153
            AGTNG  GW G  E+    A    +  + Y  DWLA+     S P D         + + 
Sbjct: 1131 AGTNGTFGWWG--ELTSSSA---LITSYAYYADWLASRAVGISLPADNWKQVLEAYKRTS 1185

Query: 152  ANLEPLL 132
             N EPLL
Sbjct: 1186 QN-EPLL 1191


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,028,937
Number of Sequences: 219361
Number of extensions: 608127
Number of successful extensions: 1737
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1728
length of database: 80,573,946
effective HSP length: 89
effective length of database: 61,050,817
effective search space used: 1465219608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)