>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  139 bits (70), Expect = 7e-30
 Identities = 121/138 (87%)
 Strand = Plus / Minus

                                                                           
Query: 192     gtcgtaggggaaggaggtggcggcgagccagtcgtcgccgtaaatgaacttgtcgacggc 251
               |||||||||||||||||||||||||||||| | ||||||| | ||||  |||||||||| 
Sbjct: 4713751 gtcgtaggggaaggaggtggcggcgagccactggtcgccggagatgaggttgtcgacgga 4713692

                                                                           
Query: 252     gaactgggcggcctcgtcgtagcccatctcgtggaacccggcccagcccacgcgcccgtt 311
               ||||||||| ||||||||||||||||| || |||||||||||||| || ||||| |||| 
Sbjct: 4713691 gaactgggccgcctcgtcgtagcccatatcatggaacccggcccatccgacgcggccgtc 4713632

                                 
Query: 312     cgtgccggcgccgggccc 329
               | || ||||||| |||||
Sbjct: 4713631 catggcggcgcccggccc 4713614

>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0698A06
          Length = 156514

 Score =  139 bits (70), Expect = 7e-30
 Identities = 121/138 (87%)
 Strand = Plus / Minus

                                                                         
Query: 192   gtcgtaggggaaggaggtggcggcgagccagtcgtcgccgtaaatgaacttgtcgacggc 251
             |||||||||||||||||||||||||||||| | ||||||| | ||||  |||||||||| 
Sbjct: 76350 gtcgtaggggaaggaggtggcggcgagccactggtcgccggagatgaggttgtcgacgga 76291

                                                                         
Query: 252   gaactgggcggcctcgtcgtagcccatctcgtggaacccggcccagcccacgcgcccgtt 311
             ||||||||| ||||||||||||||||| || |||||||||||||| || ||||| |||| 
Sbjct: 76290 gaactgggccgcctcgtcgtagcccatatcatggaacccggcccatccgacgcggccgtc 76231

                               
Query: 312   cgtgccggcgccgggccc 329
             | || ||||||| |||||
Sbjct: 76230 catggcggcgcccggccc 76213

>gb|AY664416.1| Zea mays cultivar Mo17 locus bz, complete sequence
          Length = 203581

 Score =  133 bits (67), Expect = 4e-28
 Identities = 130/151 (86%)
 Strand = Plus / Minus

                                                                        
Query: 193  tcgtaggggaaggaggtggcggcgagccagtcgtcgccgtaaatgaacttgtcgacggcg 252
            ||||||||||||||||||||| ||||||| ||||||||||| ||||| || |||||||||
Sbjct: 1205 tcgtaggggaaggaggtggcgccgagccactcgtcgccgtagatgaagttctcgacggcg 1146

                                                                        
Query: 253  aactgggcggcctcgtcgtagcccatctcgtggaacccggcccagcccacgcgcccgttc 312
            |||||||| |||||||||||  ||||||   | | ||| |||||||||||||| || | |
Sbjct: 1145 aactgggccgcctcgtcgtactccatctgccgcaccccagcccagcccacgcggccatcc 1086

                                           
Query: 313  gtgccggcgccgggcccctcgttcccgtact 343
            ||| |||| || ||||| |||||||||||||
Sbjct: 1085 gtgtcggcccccggcccgtcgttcccgtact 1055

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 251     cgaactgggcggcctcgtcgt 271
               |||||||||||||||||||||
Sbjct: 4393188 cgaactgggcggcctcgtcgt 4393168

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 281     cgtggaacccggcccagccca 301
               |||||||||||||||||||||
Sbjct: 1602796 cgtggaacccggcccagccca 1602816

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 204     ggaggtggcggcgagccagtcgtcg 228
               ||||||||||||||||||| |||||
Sbjct: 1238590 ggaggtggcggcgagccagccgtcg 1238566

>ref|XM_983570.1| PREDICTED: Mus musculus RIKEN cDNA 1810013L24 gene, transcript
           variant 2 (1810013L24Rik), mRNA
          Length = 10268

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 320 cgccgggcccctcgttcccg 339
           ||||||||||||||||||||
Sbjct: 221 cgccgggcccctcgttcccg 240

>ref|XM_983535.1| PREDICTED: Mus musculus RIKEN cDNA 1810013L24 gene, transcript
           variant 1 (1810013L24Rik), mRNA
          Length = 4079

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 320 cgccgggcccctcgttcccg 339
           ||||||||||||||||||||
Sbjct: 262 cgccgggcccctcgttcccg 281

>ref|XM_978218.1| PREDICTED: Mus musculus RIKEN cDNA 1810013L24 gene, transcript
           variant 2 (1810013L24Rik), mRNA
          Length = 10267

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 320 cgccgggcccctcgttcccg 339
           ||||||||||||||||||||
Sbjct: 221 cgccgggcccctcgttcccg 240

>ref|XM_978179.1| PREDICTED: Mus musculus RIKEN cDNA 1810013L24 gene, transcript
           variant 1 (1810013L24Rik), mRNA
          Length = 4079

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 320 cgccgggcccctcgttcccg 339
           ||||||||||||||||||||
Sbjct: 262 cgccgggcccctcgttcccg 281

>ref|XM_862438.1| PREDICTED: Canis familiaris similar to TAF6-like RNA polymerase II
            p300/CBP-associated factor-associated factor 65 kDa
            subunit 6L (PCAF-associated factor 65 alpha)
            (PAF65-alpha), transcript variant 2 (LOC476051), mRNA
          Length = 1948

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 312  cgtgccggcgccgggcccct 331
            ||||||||||||||||||||
Sbjct: 1708 cgtgccggcgccgggcccct 1689

>ref|XM_533259.2| PREDICTED: Canis familiaris similar to TAF6-like RNA polymerase II
            p300/CBP-associated factor-associated factor 65 kDa
            subunit 6L (PCAF-associated factor 65 alpha)
            (PAF65-alpha), transcript variant 1 (LOC476051), mRNA
          Length = 2023

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 312  cgtgccggcgccgggcccct 331
            ||||||||||||||||||||
Sbjct: 1783 cgtgccggcgccgggcccct 1764

>ref|XM_805834.1| Trypanosoma cruzi strain CL Brener cytochrome c oxidase copper
           chaperone (Tc00.1047053506691.64) partial mRNA
          Length = 225

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 198 ggggaaggaggtggcggcga 217
           ||||||||||||||||||||
Sbjct: 9   ggggaaggaggtggcggcga 28

>ref|XM_817023.1| Trypanosoma cruzi strain CL Brener cytochrome c oxidase copper
           chaperone (Tc00.1047053508153.994) partial mRNA
          Length = 225

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 198 ggggaaggaggtggcggcga 217
           ||||||||||||||||||||
Sbjct: 9   ggggaaggaggtggcggcga 28

>emb|AJ010601.1|SCAJ10601 Streptomyces coelicolor A3(2) DNA for whiD and whiK loci
          Length = 4692

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 248  cggcgaactgggcggcctcg 267
            ||||||||||||||||||||
Sbjct: 4641 cggcgaactgggcggcctcg 4660

>emb|CR786576.5| Zebrafish DNA sequence from clone DKEY-223D7 in linkage group 2, complete
              sequence
          Length = 202469

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     acagatccaaaaatcatctg 57
              ||||||||||||||||||||
Sbjct: 165672 acagatccaaaaatcatctg 165653

>gb|AE005762.1| Caulobacter crescentus CB15 section 88 of 359 of the complete genome
          Length = 5616

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 243  gtcgacggcgaactgggcggcctcgtcg 270
            |||| |||||||| ||||||||||||||
Sbjct: 1533 gtcgccggcgaacagggcggcctcgtcg 1560

>gb|AC011387.5| Homo sapiens chromosome 5 clone CTB-168B7, complete sequence
          Length = 164055

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    agtcttaacagatccaaaaa 50
             ||||||||||||||||||||
Sbjct: 89518 agtcttaacagatccaaaaa 89537

>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 295     cagcccacgcgcccgttcgtgccg 318
               ||||||||||||||| ||||||||
Sbjct: 1083499 cagcccacgcgcccgatcgtgccg 1083522

>dbj|AK007485.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
           enriched library, clone:1810013L24 product:hypothetical
           protein, full insert sequence
          Length = 1347

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 320 cgccgggcccctcgttcccg 339
           ||||||||||||||||||||
Sbjct: 257 cgccgggcccctcgttcccg 276

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 250     gcgaactgggcggcctcgtcgtag 273
               |||||||||||||||||| |||||
Sbjct: 3186454 gcgaactgggcggcctcgccgtag 3186431

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 245     cgacggcgaactgggcggcctcgtcgtagccc 276
               ||||||||| ||||||||||||| || |||||
Sbjct: 4735342 cgacggcgacctgggcggcctcgacggagccc 4735373

>gb|AE005084.1| Halobacterium sp. NRC-1 section 115 of 170 of the complete genome
          Length = 11691

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 263  cctcgtcgtagcccatctcg 282
            ||||||||||||||||||||
Sbjct: 8117 cctcgtcgtagcccatctcg 8136

>dbj|AB006702.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPO12
          Length = 86263

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    gatccaaaaatcatctgatt 60
             ||||||||||||||||||||
Sbjct: 28911 gatccaaaaatcatctgatt 28892


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,302,459
Number of Sequences: 3902068
Number of extensions: 2302459
Number of successful extensions: 44560
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44109
Number of HSP's gapped (non-prelim): 450
length of query: 343
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 321
effective length of database: 17,147,199,772
effective search space: 5504251126812
effective search space used: 5504251126812
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)