>UAP1_ARATH (O64765) Probable UDP-N-acetylglucosamine pyrophosphorylase (EC|
           2.7.7.23)
          Length = 502

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 44/48 (91%), Positives = 45/48 (93%)
 Frame = -2

Query: 376 VVAAGGFLTHSVPLYMTGVEVSPLSSYAGENLEAICRGRTFHAPSEIS 233
           V+AAGGFLTHSVPLY TGVEVSPL SYAGENLEAICRGRTFHAP EIS
Sbjct: 454 VIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEIS 501

>UAP1_HUMAN (Q16222) UDP-N-acetylhexosamine pyrophosphorylase (Antigen X) (AGX)|
           (Sperm-associated antigen 2) [Includes:
           UDP-N-acetylgalactosamine pyrophosphorylase (EC 2.7.7.-)
           (AGX-1); UDP-N-acetylglucosamine pyrophosphorylase (EC
           2.7.7.23) (AGX-2)]
          Length = 522

 Score = 35.0 bits (79), Expect = 0.044
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = -2

Query: 319 EVSPLSSYAGENLEAICRGRTFHAP 245
           E+SPL SYAGE LE+    + FHAP
Sbjct: 482 EISPLISYAGEGLESYVADKEFHAP 506

>UAP1_MOUSE (Q91YN5) UDP-N-acetylhexosamine pyrophosphorylase [Includes:|
           UDP-N-acetylgalactosamine pyrophosphorylase (EC
           2.7.7.-); UDP-N-acetylglucosamine pyrophosphorylase (EC
           2.7.7.23)]
          Length = 522

 Score = 34.7 bits (78), Expect = 0.058
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = -2

Query: 319 EVSPLSSYAGENLEAICRGRTFHAP 245
           E+SPL SYAGE LE     + FHAP
Sbjct: 482 EISPLISYAGEGLEGYVADKEFHAP 506

>Y1459_MYCBO (P64852) Hypothetical protein Mb1459c|
          Length = 253

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
 Frame = +2

Query: 101 SSKSSAQYTNVPNHH---------PKL*GIRSALRSLCNTASSCRYDEPMRLER---DLA 244
           S+++SA+  + P++          P L GI + L S C TAS+  Y+EP   +R    L 
Sbjct: 27  SAQTSARRYSFPSYRRPPAEKLVFPVLLGILTLLLSACQTASASGYNEPRGYDRATLKLV 86

Query: 245 GSVECPSAADRLQVFSGVGAERRNLDAC 328
            S++     +R    S +   R  + AC
Sbjct: 87  FSMDLGMCLNRFTYDSKLAPSRPQVVAC 114

>Y1424_MYCTU (P64851) Hypothetical protein Rv1424c/MT1467|
          Length = 253

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
 Frame = +2

Query: 101 SSKSSAQYTNVPNHH---------PKL*GIRSALRSLCNTASSCRYDEPMRLER---DLA 244
           S+++SA+  + P++          P L GI + L S C TAS+  Y+EP   +R    L 
Sbjct: 27  SAQTSARRYSFPSYRRPPAEKLVFPVLLGILTLLLSACQTASASGYNEPRGYDRATLKLV 86

Query: 245 GSVECPSAADRLQVFSGVGAERRNLDAC 328
            S++     +R    S +   R  + AC
Sbjct: 87  FSMDLGMCLNRFTYDSKLAPSRPQVVAC 114

>YLS5_CAEEL (P34390) Hypothetical protein F09G8.5|
          Length = 484

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
 Frame = +1

Query: 109 ELSSIHQCPKPPSQTVRH---PFGLAIPVQHCFF-LPL**TDAPRTRSRWERGMSVRGRS 276
           + SSI Q  K    TVRH   P G++I        +PL    + R       GM +  + 
Sbjct: 360 DFSSIFQTQKWSLPTVRHVDRPTGMSIEEDRVMVQMPL--AASHRMYQSMHEGMVIEMKR 417

Query: 277 PPGFLRRRS*AEKPRRLSCTRAQNGSGSRQQRL 375
           PP + R  S   +      TRA + S +R+QRL
Sbjct: 418 PPVYGRSVSMPRRRATNLTTRASSMSPAREQRL 450

>NU133_CAEEL (P34343) Nuclear pore complex protein 15 (Nucleoporin npp-15)|
          Length = 1127

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
 Frame = -1

Query: 374 SRCWRLPDPFC-------ALVHDRRRGFSAQLLRRRKPGGDLPRTDIPRSQRDLVLGASV 216
           S C  L D +C         + +R +     ++  + P   LP + +PRS + +V+   V
Sbjct: 41  SNCASLNDRYCWVLSRNQIFIWERAKSSHRAIIPTQLP---LPTSGLPRSVKCVVVYDGV 97

Query: 215 HHSGRKKQCCTGI--ARPNGCLTVW 147
           H  G  K  C GI    P G L  W
Sbjct: 98  HR-GANKTPCPGILVVSPEGVLRHW 121

>M550_ARATH (P93310) Hypothetical mitochondrial protein AtMg00550 (ORF160)|
          Length = 196

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +1

Query: 121 IHQCPKPPSQTVR-HPFGLAIPVQHCFFLP 207
           + QCPK   ++V+   F L +P+Q CF  P
Sbjct: 153 VKQCPKDKEKSVKCRKFALPLPLQACFHFP 182

>AMACR_HUMAN (Q9UHK6) Alpha-methylacyl-CoA racemase (EC 5.1.99.4)|
           (2-methylacyl-CoA racemase)
          Length = 382

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -1

Query: 356 PDPFCALVHDRRRGFSAQLLRRRKPGGDLPRTDIPRSQRDLVL 228
           P PFCA+V      F A+++R  +PG     + + R +R LVL
Sbjct: 16  PGPFCAMV---LADFGARVVRVDRPGSRYDVSRLGRGKRSLVL 55

>HEM3_SHEON (Q8E9H0) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)|
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 310

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 20/77 (25%), Positives = 37/77 (48%)
 Frame = -1

Query: 329 DRRRGFSAQLLRRRKPGGDLPRTDIPRSQRDLVLGASVHHSGRKKQCCTGIARPNGCLTV 150
           D   G   +++  R+   D   ++I +S  +L LGA+V  S  ++QC    +RP+  +  
Sbjct: 88  DFPEGLGLEVICEREDPRDAFVSNIYKSISELPLGATVGTSSLRRQCQLRASRPDLIIKD 147

Query: 149 WDGGLGHWCIELSSLSY 99
             G +G    +L +  Y
Sbjct: 148 LRGNVGTRLAKLDNGEY 164

>ZFNL4_ARATH (Q94AD9) Zinc finger CCCH type domain-containing protein ZFN-like 4|
          Length = 404

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 182 LCNTASSCRYDEPMRLERDLA 244
           LC   SSCRY+ P  L +D+A
Sbjct: 61  LCGYGSSCRYNHPTHLPQDVA 81

>PCX1_HUMAN (Q96RV3) Pecanex-like protein 1 (Pecanex homolog)|
          Length = 2341

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 209 SGRKKQCCTGIARPNGC 159
           SGRKK+CC G    N C
Sbjct: 427 SGRKKECCAGPEEKNSC 443

>Y1583_PASMU (Q9CKM8) Hypothetical protein PM1583 precursor|
          Length = 204

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +2

Query: 77  VPENPNADSSK--SSAQYTNVPNHHPKL*GI 163
           +P NPN D  K  +SA + NV N H +  G+
Sbjct: 152 IPANPNVDGEKITASAPFMNVINEHVRAKGV 182

>YEBZ_ECOLI (P76278) Inner membrane protein yebZ|
          Length = 290

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
 Frame = -1

Query: 275 DLPRTDIPRSQRDLVLGASVHHSGRKKQCCTGIARPNG-----CLTVWDGGLGH--WCIE 117
           ++PR     +    +L A V H+   +     I + N      C   W GGL    WC++
Sbjct: 114 NMPRLLFMLTTAQFILLAGVGHATLNEGVTAKIHQTNHAIHLICAAAWFGGLLPVLWCMQ 173

Query: 116 LSSLSYRH*GFQVLAR 69
           L    +RH   Q L R
Sbjct: 174 LIKGRWRHQAIQALMR 189

>LE14B_PRUAR (O24467) LEC14B homolog|
          Length = 475

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
 Frame = -1

Query: 239 DLVLGASV----HHSGRKKQCCTGIARPNGCLTVWDGGLGHW 126
           DLV GA V    HH G  + C      P    + WDG +  W
Sbjct: 411 DLVTGAQVARLNHHEGPVRDCSWHPLYPMLVSSSWDGTIARW 452

>LRP1_HUMAN (Q07954) Low-density lipoprotein receptor-related protein 1 precursor|
            (LRP) (Alpha-2-macroglobulin receptor) (A2MR)
            (Apolipoprotein E receptor) (APOER) (CD91 antigen)
          Length = 4544

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 6/34 (17%)
 Frame = -1

Query: 185  TGIARPNGCLTVWDGGLGHWC------IELSSLS 102
            TG++ P+G    W GG  +WC      IE+S L+
Sbjct: 3099 TGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLN 3132

>HMCN1_HUMAN (Q96RW7) Hemicentin-1 precursor (Fibulin-6) (FIBL-6)|
          Length = 5635

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
 Frame = -2

Query: 358  FLTHSVPLYMTGVEV-SPLSSYAGENLEAICRGRTFHAPSEISF*AHRFIIAAGRSSVAQ 182
            FL+  VP  + G E+ S +S   GEN+E +C       P  I +      IA+G +   +
Sbjct: 3238 FLSIQVPPSVAGAEIPSDVSVLLGENVELVCNANGIPTPL-IQWLKDGKPIASGETERIR 3296

Query: 181  GSQGRTDASQFGMVVWDIG 125
             S   +  + +G +  D G
Sbjct: 3297 VSANGSTLNIYGALTSDTG 3315

>BRCA1_BOVIN (Q864U1) Breast cancer type 1 susceptibility protein homolog|
          Length = 1849

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +2

Query: 134  PNHHPKL*GIRSALRSLCNTASSCRYDEPMRLERDLAGS 250
            PN  P L  I+S+++++C  + S +++EP+       GS
Sbjct: 971  PNLIPSLSPIKSSVKTICKKSPSEKFEEPVTSPEKTLGS 1009

>LRP1_CHICK (P98157) Low-density lipoprotein receptor-related protein 1 precursor|
            (LRP) (Alpha-2-macroglobulin receptor) (A2MR)
          Length = 4543

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 6/34 (17%)
 Frame = -1

Query: 185  TGIARPNGCLTVWDGGLGHWC------IELSSLS 102
            TG++ P+G    W GG  +WC      IE+S L+
Sbjct: 3096 TGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLN 3129

>ETXD_STAAU (P20723) Enterotoxin type D precursor (SED)|
          Length = 258

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = -2

Query: 337 LYMTGVEVSPLSSYAGENLEAICRGRTFHAPSEIS 233
           L+ T + +SPL+  A EN++++ + +  H  SE+S
Sbjct: 11  LFFTSLVISPLNVKANENIDSV-KEKELHKKSELS 44

>VNNL2_DROME (Q8IRR1) Vanin-like protein 2 precursor|
          Length = 517

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +3

Query: 57  KIQQSGQYLKTLMPIAQRAQLNTPMSQTTIPNCEASVRPC--DPCAT 191
           +I QS     T + +   + LN+  S T +PN E  + PC  DP AT
Sbjct: 55  EIIQSQNATSTDIIVFPESTLNSAGSTTFVPNPEDQINPCLSDPNAT 101

>LGT_ARTAU (P60966) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 318

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -1

Query: 233 VLGASVHHSGRKKQCCTGIAR-PNGCLTVWDGGLGHW 126
           ++G  ++H     Q   G  + P G   +W+GGLG W
Sbjct: 70  IVGGRLYHVITDNQLYFGPGKDPWGAFRIWEGGLGIW 106

>ZFN3_ARATH (Q8L7N8) Zinc finger CCCH type domain-containing protein ZFN3|
          Length = 375

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +2

Query: 182 LCNTASSCRYDEPMRLERDLAGSVECPSAADRLQVFSGVGAERRNL 319
           +C    SC++D PMR+      +   PS +  L   + +  E RNL
Sbjct: 303 ICKFGPSCKFDHPMRV-FTYNNNTASPSPSSSLHQETAITTELRNL 347

>FMC1_ECOLI (P02971) CFA/I fimbrial subunit B precursor (Colonization factor|
           antigen I subunit B) (CFA/I pilin) (CFA/I antigen)
          Length = 170

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -3

Query: 165 RMPHSLGWWFGTLVY*AELFELSALGFSGTGQTVVS 58
           +MP S+ W    L   A+ FE +ALG+S +G   VS
Sbjct: 100 QMPISVSWGGQVLSTTAKEFEAAALGYSASGVNGVS 135


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,251,005
Number of Sequences: 219361
Number of extensions: 1242079
Number of successful extensions: 4052
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4052
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)