ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet33a06 |
|---|---|
| Clone Library Name | barley_pub |
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 64.3 bits (155), Expect = 7e-11 Identities = 28/62 (45%), Positives = 47/62 (75%) Frame = -2 Query: 377 ALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTEIPV 198 A +ID V+++ + Y+ A + V++NRV MD++V++L+EKET+ G+EFR I+ E+T IP Sbjct: 561 ATNIDKQVREIVSECYKEAKKIVKDNRVVMDRLVDLLIEKETIEGNEFRHIVKEYTAIPE 620 Query: 197 EN 192 +N Sbjct: 621 KN 622
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 64.3 bits (155), Expect = 7e-11 Identities = 27/61 (44%), Positives = 49/61 (80%) Frame = -2 Query: 377 ALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTEIPV 198 A ID+ V+QL++Q +++A + V+E R +D++V++L+EKET+ G+EFR I++E+ E+PV Sbjct: 560 ATRIDAQVRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQIVAEYAEVPV 619 Query: 197 E 195 + Sbjct: 620 K 620
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 60.1 bits (144), Expect = 1e-09 Identities = 29/59 (49%), Positives = 42/59 (71%) Frame = -2 Query: 368 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTEIPVEN 192 ID V+++ YE A++ V +NRV +D IVE LL+KET+ GDEFR +LS +T +P +N Sbjct: 578 IDDEVRKIITYCYEKAIEIVLDNRVVIDLIVEKLLDKETMDGDEFRELLSTYTILPNKN 636
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 58.2 bits (139), Expect = 5e-09 Identities = 24/56 (42%), Positives = 40/56 (71%) Frame = -2 Query: 368 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTEIP 201 ID V+ + + +Q +++NRV +DK+V++L+EKET+ GDEFR I+ +FT +P Sbjct: 564 IDMQVRAIIQHCHTETVQIIKDNRVVIDKLVDLLIEKETIDGDEFRQIVGDFTSLP 619
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 54.7 bits (130), Expect = 5e-08 Identities = 26/59 (44%), Positives = 39/59 (66%) Frame = -2 Query: 368 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTEIPVEN 192 ID+ V+ + + YE L+ ++ NRV MD+IVE L+EKETL G EFR ++S+ + N Sbjct: 545 IDAQVRGMIEACYEKVLELMQANRVVMDRIVEELMEKETLDGKEFRQLVSQAARLTAVN 603
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 49.7 bits (117), Expect = 2e-06 Identities = 24/53 (45%), Positives = 36/53 (67%) Frame = -2 Query: 377 ALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILS 219 A ID V QL DQAY+ A Q + ENR +D++ E+L+EKET+ +E + +L+ Sbjct: 554 AAAIDEEVSQLVDQAYQRAKQVLVENRGILDQLAEILVEKETVDSEELQTLLA 606
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 42.4 bits (98), Expect = 3e-04 Identities = 18/48 (37%), Positives = 33/48 (68%) Frame = -2 Query: 368 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAI 225 +D V++L D+AYE A Q + + + K+ ++L+EKET+ G+EF ++ Sbjct: 648 VDKEVRELVDKAYERATQIINTHIDILHKLAQLLIEKETVDGEEFMSL 695
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 40.8 bits (94), Expect = 8e-04 Identities = 17/57 (29%), Positives = 35/57 (61%) Frame = -2 Query: 377 ALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTE 207 A ID ++ + A++ A + + ENR MD +V+ L+++ET+ G+ FR ++ + + Sbjct: 599 AARIDREIQAIVTAAHQRATRIIEENRNLMDLLVDALIDQETIEGEHFRQLVESYQQ 655
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 40.0 bits (92), Expect = 0.001 Identities = 19/54 (35%), Positives = 32/54 (59%) Frame = -2 Query: 377 ALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSE 216 A +ID VK++ +Q + AL + NR ++ I E +LEKE + G+E +L + Sbjct: 566 AKEIDLEVKEIVEQGHNQALAILEHNRDLLEAIAEKILEKEVIEGEELHHLLGQ 619
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 39.7 bits (91), Expect = 0.002 Identities = 16/48 (33%), Positives = 34/48 (70%) Frame = -2 Query: 368 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAI 225 +D+ V++L ++AYE A + + + + K+ ++L+EKET+ G+EF ++ Sbjct: 649 VDAEVRELVERAYERATEIITTHIDILHKLAQLLIEKETVDGEEFMSL 696
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 38.1 bits (87), Expect = 0.005 Identities = 15/48 (31%), Positives = 34/48 (70%) Frame = -2 Query: 368 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAI 225 +D+ V++L ++AY+ A + + + + K+ ++L+EKET+ G+EF ++ Sbjct: 658 VDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFMSL 705
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 38.1 bits (87), Expect = 0.005 Identities = 18/55 (32%), Positives = 34/55 (61%) Frame = -2 Query: 377 ALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEF 213 A ++DS +K L ++ Y Q + + + A++ +V L EKE ++G+ R I+SE+ Sbjct: 566 AEEMDSFIKNLLEERYVHVKQTLSDYKDAIEVMVNELFEKEVITGERVREIISEY 620
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 37.7 bits (86), Expect = 0.007 Identities = 17/55 (30%), Positives = 35/55 (63%) Frame = -2 Query: 377 ALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEF 213 A ++D +K L ++ Y+ Q + + R A++ +V+ L +KE ++G+ R I+SE+ Sbjct: 560 AEEMDLFIKNLLEERYQHVKQTLSDYREAIEIMVKELFDKEVITGERVREIISEY 614
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 37.4 bits (85), Expect = 0.009 Identities = 19/62 (30%), Positives = 36/62 (58%) Frame = -2 Query: 377 ALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTEIPV 198 A +ID ++++ + YE A Q + ENR ++ I + LL+ ETL ++ + ++ T +P Sbjct: 550 AYEIDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHLIDHGT-LPE 608 Query: 197 EN 192 N Sbjct: 609 RN 610
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 37.4 bits (85), Expect = 0.009 Identities = 17/55 (30%), Positives = 35/55 (63%) Frame = -2 Query: 377 ALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEF 213 A ++D +K L ++ Y+ Q + + R A++ +V+ L +KE ++G+ R I+SE+ Sbjct: 560 AEEMDLFIKNLLEERYKHVKQTLSDYREAIEIMVKELFDKEVITGERVREIISEY 614
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 36.2 bits (82), Expect = 0.020 Identities = 15/48 (31%), Positives = 32/48 (66%) Frame = -2 Query: 368 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAI 225 +D+ V++L ++AY A + + + K+ ++L+EKET+ G+EF ++ Sbjct: 646 VDAEVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFMSL 693
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 35.8 bits (81), Expect = 0.026 Identities = 21/59 (35%), Positives = 31/59 (52%) Frame = -2 Query: 377 ALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTEIP 201 A DID V++L + A+ A + + E R +D + LLEKETL E I + + P Sbjct: 551 ARDIDDEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELEGIFASVEKRP 609
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 35.8 bits (81), Expect = 0.026 Identities = 18/46 (39%), Positives = 29/46 (63%) Frame = -2 Query: 371 DIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEF 234 +ID VK++ + YE A V E + + +V+ LLEKET++ +EF Sbjct: 546 EIDEEVKRIITEQYEKAKAIVEEYKEPLKAVVKKLLEKETITCEEF 591
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 35.4 bits (80), Expect = 0.034 Identities = 20/59 (33%), Positives = 33/59 (55%) Frame = -2 Query: 377 ALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTEIP 201 A +ID V++L + A+ A + + E R +D + LLEKETL E +I ++ + P Sbjct: 551 AREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFADVEKRP 609
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 35.4 bits (80), Expect = 0.034 Identities = 20/59 (33%), Positives = 33/59 (55%) Frame = -2 Query: 377 ALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTEIP 201 A +ID V++L + A+ A + + E R +D + LLEKETL E +I ++ + P Sbjct: 551 AREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFADVEKRP 609
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 35.0 bits (79), Expect = 0.044 Identities = 17/51 (33%), Positives = 28/51 (54%) Frame = -2 Query: 368 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSE 216 +D V+ + Y A + +NR +D++V L+EKET+ EF I+ E Sbjct: 562 VDLEVRSILKDCYIQARTILSQNRKLIDRVVNELVEKETIEAKEFMRIVEE 612
>GATE_SULSO (Q97ZH6) Glutamyl-tRNA(Gln) amidotransferase subunit E (EC 6.3.5.-)| (Glu-ADT subunit E) Length = 633 Score = 34.7 bits (78), Expect = 0.058 Identities = 13/54 (24%), Positives = 33/54 (61%) Frame = -2 Query: 356 VKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTEIPVE 195 + +++++ E ++ + E+R++ D I E+L+E T E + I+ ++ +P+E Sbjct: 522 ISKINEEDIEELIKSIYESRISKDSISEILVEYTTSKNVELKDIIRKYEVLPIE 575
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 34.3 bits (77), Expect = 0.075 Identities = 15/54 (27%), Positives = 33/54 (61%) Frame = -2 Query: 377 ALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSE 216 A +ID V+++ + Y Q + EN+ ++D + + LL+ ETL ++ ++++ E Sbjct: 555 AHEIDLEVQRIIKECYARCKQILLENKDSLDLVAKTLLDMETLDAEQIKSLVHE 608
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 34.3 bits (77), Expect = 0.075 Identities = 17/50 (34%), Positives = 29/50 (58%) Frame = -2 Query: 368 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILS 219 ID+ VK++ Q YE A + ++ + + L+E ETLSG + + +LS Sbjct: 545 IDAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNLLS 594
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 34.3 bits (77), Expect = 0.075 Identities = 17/50 (34%), Positives = 29/50 (58%) Frame = -2 Query: 368 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILS 219 ID+ VK++ Q YE A + ++ + + L+E ETLSG + + +LS Sbjct: 545 IDAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNLLS 594
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 32.7 bits (73), Expect = 0.22 Identities = 17/51 (33%), Positives = 28/51 (54%) Frame = -2 Query: 377 ALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAI 225 A +ID V+ L ++A A + ++ NR I E LL+ ETL + +A+ Sbjct: 572 AYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKAL 622
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 32.7 bits (73), Expect = 0.22 Identities = 17/51 (33%), Positives = 28/51 (54%) Frame = -2 Query: 377 ALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAI 225 A +ID V+ L ++A A + ++ NR I E LL+ ETL + +A+ Sbjct: 572 AYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKAL 622
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 32.0 bits (71), Expect = 0.37 Identities = 19/61 (31%), Positives = 33/61 (54%) Frame = -2 Query: 377 ALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTEIPV 198 A DID + + ++ Y+ A ++ NR ++ +VE LL ET+ + I E T++P Sbjct: 613 AKDIDFEINAIIEEQYKKARTIIKTNRKELELLVEALLIAETILKSDIDYI-HEHTKLPP 671 Query: 197 E 195 E Sbjct: 672 E 672
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 32.0 bits (71), Expect = 0.37 Identities = 15/51 (29%), Positives = 30/51 (58%) Frame = -2 Query: 377 ALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAI 225 A +ID ++++ + EIA++ + +N ++ I + LLE ET+ +E I Sbjct: 600 AHEIDLEIRKIISASEEIAIKAIEQNLELLELIKDSLLENETIVAEEIEYI 650
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 31.2 bits (69), Expect = 0.64 Identities = 15/50 (30%), Positives = 28/50 (56%) Frame = -2 Query: 368 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILS 219 ID+ + ++ ++Y+ A + + + E LLE ETLS DE + ++S Sbjct: 589 IDAEINRVLQESYKRAKVILETKKKEHQLLAEALLEYETLSADEVKRVIS 638
>FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)| Length = 518 Score = 30.8 bits (68), Expect = 0.83 Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 12/50 (24%) Frame = -1 Query: 360 GGEAAVGPGIRDRAAAGEG------------EPRGHGQDRGGAPGEGDAE 247 GG G G +DR G G EPRG G RGG G G ++ Sbjct: 202 GGGGGYGGGQQDRGGRGRGGGGGYNRSSGGYEPRGRGGGRGGRGGMGGSD 251
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/61 (27%), Positives = 34/61 (55%) Frame = -2 Query: 377 ALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTEIPV 198 A DID+ + + ++ Y+ A ++ NR ++ +VE LL ET+ + + + T++P Sbjct: 616 AKDIDNEINFIIEEQYKKAKTIIKSNRKELELLVEALLIAETILKSDI-DFIHKNTKLPP 674 Query: 197 E 195 E Sbjct: 675 E 675
>FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)| Length = 512 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = -1 Query: 378 GARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDAE 247 G + GG G G +R++ G EPRG G RGG G G ++ Sbjct: 202 GGQQDRGGRGRGGGGGYNRSSGGY-EPRGRGGGRGGRGGMGGSD 244
>LYAR_MOUSE (Q08288) Cell growth-regulating nucleolar protein| Length = 388 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -1 Query: 360 GGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDAE 247 G EAA G ++ A G+ G DR G PGE AE Sbjct: 232 GEEAAEASGPPEKKKAQGGQASEEGADRNGGPGEDAAE 269
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/51 (27%), Positives = 31/51 (60%) Frame = -2 Query: 368 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSE 216 IDS V ++ + ++ + ++E ++KI +VLL+KE L+ ++ +L + Sbjct: 735 IDSEVYRIVQECHDRCTKLLKEKAEDVEKIAQVLLKKEVLTREDMIDLLGK 785
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/49 (26%), Positives = 26/49 (53%) Frame = -2 Query: 368 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAIL 222 +D V ++ + Y + + E + ++ I LLE+ET+ DEF ++ Sbjct: 530 VDEEVARVLAERYRAVVALLTEKKELLEYIATRLLERETIERDEFEEVI 578
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/51 (29%), Positives = 28/51 (54%) Frame = -2 Query: 377 ALDIDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAI 225 A+ ID V+++ +AY+ A + + +R I E LL+ ETL + ++ Sbjct: 581 AVMIDDEVRRILGEAYDRAKEAIETHREQHKAIAEALLKYETLDAKQIMSL 631
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/49 (30%), Positives = 28/49 (57%) Frame = -2 Query: 368 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAIL 222 ID V+ L + AY+ + + E + ++K+ +LLEKE L ++ +L Sbjct: 697 IDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELL 745
>GRP1_ORYSA (P25074) Glycine-rich cell wall structural protein 1 precursor| Length = 166 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -1 Query: 360 GGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 256 GG G G + + +G G G+GQ GGA G+G Sbjct: 75 GGGGGGGGGGSNGSGSGSGYGYGYGQGNGGAQGQG 109
>DNAK_HALMA (Q01100) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 635 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/41 (41%), Positives = 20/41 (48%) Frame = -1 Query: 375 ARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGD 253 A+ GG A GPG AAG G G G GGA +G+ Sbjct: 582 AQQAAGGAAGAGPG----GAAGPGGAAGPGGAAGGAAEQGE 618
>AL2S8_BOVIN (Q58CW6) Amyotrophic lateral sclerosis 2 chromosomal region| candidate gene 8 protein homolog Length = 703 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%) Frame = -2 Query: 305 ENRVAMDKIVEV--LLEKETLSGDEFRAILSEFTEIPVE 195 +N VA+D++VEV + + ETL G+ R +L IP++ Sbjct: 636 QNLVAVDQLVEVEDVEDTETLEGNVHRILLGNVQTIPIQ 674
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/37 (35%), Positives = 25/37 (67%) Frame = -2 Query: 368 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEK 258 +DS V++L ++AYE A Q + + + K+ ++L+EK Sbjct: 626 VDSEVRELVEKAYERAKQIITTHIDILHKLAQLLIEK 662
>CLPB_CLOPE (Q8XKG8) Chaperone clpB| Length = 866 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/40 (35%), Positives = 26/40 (65%) Frame = -2 Query: 317 QQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTEIPV 198 ++++E +M+K E L KE ++ +E I+S++T IPV Sbjct: 516 RKIKEQEASMEKDNENALLKEEVTENEISEIISKWTGIPV 555
>CRH1_YEAST (P53301) Probable glycosidase CRH1 precursor (EC 3.2.-.-) (Congo| red hypersensitive protein 1) Length = 507 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/61 (36%), Positives = 31/61 (50%) Frame = +1 Query: 196 STGISVNSDRMARNSSPLSVSFSRSTSTILSMATRFSLTCCSAISYAWSDSCFTAESMSS 375 S +V+S + SS SVS S STS S AT S+++ + S S F +S SS Sbjct: 331 SASSTVSSSVSSTVSSSSSVSSSSSTSPSSSTATSSKTLASSSVTTSSSISSFEKQSSSS 390 Query: 376 A 378 + Sbjct: 391 S 391
>CLPB_WOLPM (Q73IE4) Chaperone clpB| Length = 853 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/43 (32%), Positives = 27/43 (62%) Frame = -2 Query: 320 LQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTEIPVEN 192 + Q+ +K+ + L+KE ++GD+ I+S++T IPV+N Sbjct: 508 IPQLENELKNQEKVTDSFLKKE-VTGDDIANIVSKWTGIPVDN 549
>MYSB_ACACA (P19706) Myosin heavy chain IB (Myosin heavy chain IL)| Length = 1147 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/34 (41%), Positives = 15/34 (44%) Frame = -1 Query: 357 GEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 256 G GPG+ G G P G G RGG G G Sbjct: 1004 GAGRGGPGMGGPGGPGRGGPGGPGAGRGGPGGPG 1037 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/36 (44%), Positives = 17/36 (47%) Frame = -1 Query: 363 LGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 256 +GG G G AG G P G G RGG PG G Sbjct: 1012 MGGPGGPGRGGPGGPGAGRGGPGGPGAGRGG-PGMG 1046
>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)| (Translocated in liposarcoma protein) (POMp75) (75 kDa DNA-pairing protein) Length = 526 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -1 Query: 360 GGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDAE 247 GG G G +R++ G EPRG G RGG G G ++ Sbjct: 222 GGGGGGGGGGYNRSSGGY-EPRGRGGGRGGRGGMGGSD 258
>WFS1_HUMAN (O76024) Wolframin| Length = 890 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Frame = -1 Query: 360 GGEAAVGPGIRDRAAAGEGE---PRGHGQDRGGAPGEGDAE 247 G +A GPG+RD AA E + R + G P +GD E Sbjct: 45 GPQAGPGPGVRDAAAPAEPQAQHTRSRERADGTGPTKGDME 85
>BCHJ_RHOS4 (Q9Z5D7) Bacteriochlorophyll synthase 23 kDa chain (4-vinyl| reductase) Length = 206 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/30 (53%), Positives = 17/30 (56%) Frame = -1 Query: 354 EAAVGPGIRDRAAAGEGEPRGHGQDRGGAP 265 EAA GPG DRA A G PR G + G P Sbjct: 31 EAAFGPGAADRALAAAGVPR-PGPESGMLP 59
>B028_CAEEL (P41996) Cytokinesis protein B0280.5 precursor| Length = 524 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = -1 Query: 378 GARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDAE 247 G+ G + G G A+GEG G+ G A GEG E Sbjct: 78 GSGESSGETSGEGSGESSGEASGEGSGEASGEGSGEASGEGSGE 121
>UBP47_MOUSE (Q8BY87) Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.1.2.15)| (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47) Length = 1376 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/59 (30%), Positives = 30/59 (50%) Frame = -2 Query: 368 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTEIPVEN 192 +D K S I ++ R + +D E++LE ++ DE R LSE + IP+E+ Sbjct: 1214 LDGVEKMKSMSQLAILTRRWRPAEMKLDPFQELVLESNSV--DELREKLSEISGIPLED 1270
>NLAL2_ARATH (Q9FK53) Putative H/ACA ribonucleoprotein complex subunit 1-like| protein 2 Length = 189 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = -1 Query: 360 GGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 256 GG + G G RD G G RG G+ GG EG Sbjct: 6 GGGSFRGRGGRDNGGRGRGRGRGRGRFGGGNYDEG 40
>EXON_HHV2 (P06489) Alkaline exonuclease (EC 3.1.11.-)| Length = 620 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/41 (43%), Positives = 19/41 (46%) Frame = -1 Query: 372 RHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDA 250 RHR G E G+ R G G P G RGGAPG A Sbjct: 519 RHRAGAEE----GVTFRLEDGRGAPAG----RGGAPGPAKA 551
>ASX_DROME (Q9V727) Polycomb protein Asx (Additional sex combs)| Length = 1669 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/45 (40%), Positives = 25/45 (55%) Frame = +1 Query: 241 SPLSVSFSRSTSTILSMATRFSLTCCSAISYAWSDSCFTAESMSS 375 SPL ++ S S ST S T S T S+ S + S SC ++ S S+ Sbjct: 662 SPLPIASSISGSTPASSITSTSCTSSSSSSASMSSSCSSSNSGST 706
>SPD2_NEPCL (P46804) Spidroin 2 (Dragline silk fibroin 2) (Fragment)| Length = 627 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 12/53 (22%) Frame = -1 Query: 372 RHRLGGEAAVGPGIRDRAAAGEGE------------PRGHGQDRGGAPGEGDA 250 R+ G + GPG AAAG G+ P G+GQ + G G G A Sbjct: 60 RYGPGQQGPSGPGSAAAAAAGSGQQGPGGYGPRQQGPGGYGQGQQGPSGPGSA 112
>AFRP_STRGR (Q9ZN78) A-factor receptor protein (A-factor-binding protein)| Length = 276 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/38 (39%), Positives = 17/38 (44%) Frame = -1 Query: 360 GGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDAE 247 G +AA G R + G G G GGA EGD E Sbjct: 226 GSDAATDSGSRSGGSGLRGGGSGRGPRAGGAGDEGDEE 263
>FIBH_BOMMO (P05790) Fibroin heavy chain precursor (Fib-H) (H-fibroin)| Length = 5263 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/43 (37%), Positives = 17/43 (39%) Frame = -1 Query: 378 GARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDA 250 GA G A G G A AG G G+G G G G A Sbjct: 4472 GAGSGAGAGAGSGAGAGSGAGAGSGAGAGYGAGYGAGAGSGAA 4514
>XKR7_MOUSE (Q5GH64) XK-related protein 7| Length = 580 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/38 (36%), Positives = 15/38 (39%) Frame = -1 Query: 360 GGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDAE 247 G A GPG A A G G G+ G G G E Sbjct: 7 GAAAVAGPGPEGPAGADRGGAGGRGEAAAGIAGPGPVE 44
>UBP47_HUMAN (Q96K76) Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.1.2.15)| (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47) Length = 1375 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/59 (27%), Positives = 31/59 (52%) Frame = -2 Query: 368 IDSAVKQLSDQAYEIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAILSEFTEIPVEN 192 +D K S + ++ + + + +D EV+LE ++ DE R LSE + IP+++ Sbjct: 1213 LDGVEKMKSMSQLAVLSRRWKPSEMKLDPFQEVVLESSSV--DELREKLSEISGIPLDD 1269
>ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/35 (42%), Positives = 16/35 (45%) Frame = -1 Query: 360 GGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 256 GG GPG R G G P G+G GG G G Sbjct: 274 GGNYGGGPGYSSRGGYGGGGP-GYGNQGGGYGGGG 307
>ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/35 (42%), Positives = 16/35 (45%) Frame = -1 Query: 360 GGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 256 GG GPG R G G P G+G GG G G Sbjct: 274 GGNYGGGPGYSSRGGYGGGGP-GYGNQGGGYGGGG 307
>STX18_RAT (Q68FW4) Syntaxin-18| Length = 334 Score = 27.7 bits (60), Expect = 7.0 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Frame = -2 Query: 359 AVKQLSDQAY-EIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAI 225 A++QL +A+ EI QQV+E+R A+ VE L++ E RAI Sbjct: 110 AIQQLRTEAHKEIHSQQVKEHRTAVLDFVEDYLKRVCKLYSEQRAI 155
>RS2_BOVIN (O18789) 40S ribosomal protein S2 (Fragment)| Length = 286 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/44 (38%), Positives = 19/44 (43%) Frame = -1 Query: 378 GARHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDAE 247 G R G G G+R G G RG G+ RGG G AE Sbjct: 11 GMGGRGGFRGGFGSGVR-----GRGRGRGRGRGRGGGARGGKAE 49
>ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 378 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/35 (42%), Positives = 16/35 (45%) Frame = -1 Query: 360 GGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEG 256 GG GPG R G G P G+G GG G G Sbjct: 274 GGNYGGGPGYSSRGGYGGGGP-GYGNQGGGYGGGG 307
>XKR7_RAT (Q5GH56) XK-related protein 7| Length = 580 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/38 (36%), Positives = 15/38 (39%) Frame = -1 Query: 360 GGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDAE 247 G A GPG A A G G G+ G G G E Sbjct: 7 GAAAVAGPGPEGPAGADRGGAGGRGEVAAGIAGPGPVE 44
>INSM1_HUMAN (Q01101) Insulinoma-associated protein 1 (Zinc finger protein IA-1)| Length = 510 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 5/30 (16%) Frame = +2 Query: 299 GSPSPAAARSRMPG-----PTAASPPSRCL 373 G P P AA R PG PTAA PP++ + Sbjct: 186 GPPLPPAAALRPPGKRPPPPTAAEPPAKAV 215
>SMD3_DROME (O44437) Small nuclear ribonucleoprotein SM D3 (snRNP core protein| D3) (SM-D3) Length = 151 Score = 27.3 bits (59), Expect = 9.2 Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 3/37 (8%) Frame = -1 Query: 363 LGGEAAVGPGIRDRAAA---GEGEPRGHGQDRGGAPG 262 LGG A G RA A G G P G G+ GG PG Sbjct: 91 LGGTAGRGKAAILRAQARGRGRGGPPGGGRGTGGPPG 127
>CHEB1_PSESM (Q884V3) Chemotaxis response regulator protein-glutamate| methylesterase of group 1 operon (EC 3.1.1.61) Length = 390 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 4/29 (13%) Frame = +2 Query: 302 SPSPAAARSRMPGPTAASP----PSRCLA 376 +P+P+ SR P P+AA+P PSR +A Sbjct: 151 APAPSTLSSRAPAPSAAAPARAVPSRTVA 179
>YCF2_PINKO (Q85WV5) Protein ycf2| Length = 1320 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -2 Query: 338 QAYEIALQQVRENRVAMDKIVEVLLEKETLSGDE 237 ++Y+ NRV +D+I + LLEKE L +E Sbjct: 1267 ESYQYLSNLFLSNRVLLDQITKTLLEKECLFPNE 1300
>STX18_PONPY (Q5REB4) Syntaxin-18| Length = 335 Score = 27.3 bits (59), Expect = 9.2 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Frame = -2 Query: 359 AVKQLSDQAY-EIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAI 225 A++QL +A+ EI QQV+E+R A+ +E L++ E RAI Sbjct: 110 AIQQLRTEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAI 155
>STX18_HUMAN (Q9P2W9) Syntaxin-18 (Growth-inhibiting gene 9 protein)| Length = 335 Score = 27.3 bits (59), Expect = 9.2 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Frame = -2 Query: 359 AVKQLSDQAY-EIALQQVRENRVAMDKIVEVLLEKETLSGDEFRAI 225 A++QL +A+ EI QQV+E+R A+ +E L++ E RAI Sbjct: 110 AIQQLRTEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAI 155
>NFAT5_HUMAN (O94916) Nuclear factor of activated T-cells 5 (T-cell| transcription factor NFAT5) (NF-AT5) (Tonicity-responsive enhancer-binding protein) (TonE-binding protein) (TonEBP) Length = 1531 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%) Frame = +1 Query: 28 TASELTLHA-----VPRAGISVHPRNMNILQEQQQQKTFQ 132 +++E T+H +P SVHP++ N L QQQQ+ Q Sbjct: 847 SSTEPTVHTRPDNLLPGRAESVHPQSENTLSNQQQQQQQQ 886
>GRP1_PHAVU (P10495) Glycine-rich cell wall structural protein 1.0 precursor| (GRP 1.0) Length = 252 Score = 27.3 bits (59), Expect = 9.2 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 3/38 (7%) Frame = -1 Query: 360 GGEAAV---GPGIRDRAAAGEGEPRGHGQDRGGAPGEG 256 GG AAV G G + A GEG G+G GG G G Sbjct: 55 GGGAAVELGGGGYGEGAGGGEGAGAGYGAAGGGHGGGG 92
>FOXGB_RAT (Q00939) Forkhead box protein G1B (Forkhead-related protein FKHL1)| (Transcription factor BF-1) (Brain factor 1) (BF1) Length = 480 Score = 27.3 bits (59), Expect = 9.2 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Frame = -1 Query: 378 GARHRLGGEAA----VGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDAE 247 GA+ GG A VGP +++ A GE + G GG GEG E Sbjct: 116 GAKGEPGGGPAELAPVGPDEKEKGAGAGGEEK-KGAGEGGKDGEGGKE 162
>U520_DROME (Q9VUV9) Putative U5 small nuclear ribonucleoprotein 200 kDa| helicase (EC 3.6.1.-) Length = 2142 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = -1 Query: 372 RHRLGGEAAVGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDAE 247 R ++ G +A+ +R + G+ E + G+ RG G+GDAE Sbjct: 352 REKMRGNSALAKILR-QLDTGKSEDQEEGEARGSKRGKGDAE 392
>FOXGB_MOUSE (Q60987) Forkhead box protein G1B (Forkhead-related protein FKHL1)| (Transcription factor BF-1) (Brain factor 1) (BF1) Length = 481 Score = 27.3 bits (59), Expect = 9.2 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Frame = -1 Query: 378 GARHRLGGEAA----VGPGIRDRAAAGEGEPRGHGQDRGGAPGEGDAE 247 GA+ GG A VGP +++ A GE + G GG GEG E Sbjct: 117 GAKGEPGGGPAELAPVGPDEKEKGAGAGGEEK-KGAGEGGKDGEGGKE 163
>AL2S8_HUMAN (Q8N187) Amyotrophic lateral sclerosis 2 chromosomal region| candidate gene 8 protein (Calcium-response factor) (CaRF) (Protein NYD-SP24) Length = 725 Score = 27.3 bits (59), Expect = 9.2 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%) Frame = -2 Query: 377 ALDIDSAVKQLSDQAYEIA-LQQVRENRVAMDKIVEVLLEKET--LSGDEFRAILSEFTE 207 +L D+ + Q + A + L + +N VAMD++VEV ++T L G R +L + Sbjct: 615 SLQRDTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNLEGTVHRILLGDVQT 674 Query: 206 IPVE 195 IP++ Sbjct: 675 IPIQ 678
>SECB_SERMA (Q8KRM2) Protein-export protein secB| Length = 156 Score = 27.3 bits (59), Expect = 9.2 Identities = 10/20 (50%), Positives = 16/20 (80%) Frame = -2 Query: 374 LDIDSAVKQLSDQAYEIALQ 315 LD+D+A QL+D+ YE+ L+ Sbjct: 42 LDLDTASSQLADEVYEVVLR 61 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,320,480 Number of Sequences: 219361 Number of extensions: 557516 Number of successful extensions: 4329 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 3430 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4261 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
