ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet33a06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
2dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
3dbj|AK072047.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
4dbj|AK064913.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
5dbj|AK060805.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 4e-25
6dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-07
7dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-07
8gb|AY105892.1| Zea mays PCO103778 mRNA sequence 60 5e-06
9dbj|AK063733.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 8e-05
10gb|AC121144.11| Mus musculus chromosome 3, clone RP24-202D19, co... 44 0.32
11gb|AC151331.2| Xenopus tropicalis clone ISB-302M5, complete sequ... 44 0.32
12gb|AC098743.3| Mus musculus BAC clone RP23-122O4 from 1, complet... 44 0.32
13emb|AL031289.1|HS739H11 Human DNA sequence from clone RP4-739H11... 44 0.32
14dbj|AB236774.1| Trifolium pratense RNA for putative zinc depende... 44 0.32
15emb|AL354740.29| Human DNA sequence from clone RP11-513I15 on ch... 42 1.3
16emb|BX649413.8| Mouse DNA sequence from clone RP23-193P21 on chr... 42 1.3
17dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.3
18gb|AC153433.6| Mus musculus 10 BAC RP23-69K22 (Roswell Park Canc... 42 1.3
19gb|AC009343.9| Drosophila melanogaster clone BACR08L17, complete... 40 5.0
20gb|AC158803.11| Mus musculus 10 BAC RP24-186E11 (Roswell Park Ca... 40 5.0
21gb|AC122893.6| Mus musculus BAC clone RP23-67C3 from chromosome ... 40 5.0
22ref|XM_458917.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 5.0
23ref|XM_454238.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E06413g ... 40 5.0
24gb|AC113095.14| Mus musculus chromosome 9, clone RP23-311A1, com... 40 5.0
25gb|AC123532.4| Mus musculus chromosome 14 clone RP23-84B6, compl... 40 5.0
26ref|XM_815304.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.0
27gb|AC098877.3| Mus musculus BAC clone RP23-2C24 from 14, complet... 40 5.0
28gb|AC124195.4| Mus musculus BAC clone RP23-285G17 from 16, compl... 40 5.0
29gb|AC158340.9| Mus musculus chromosome 1, clone RP24-161N8, comp... 40 5.0
30gb|AC102781.5| Mus musculus chromosome 1, clone RP23-271G2, comp... 40 5.0
31gb|AC104323.27| Mus musculus strain C57BL/6J chromosome 17 clone... 40 5.0
32gb|AY143411.1| Buellia elegans internal transcribed spacer 1, pa... 40 5.0
33emb|AL354872.9| Human DNA sequence from clone RP11-42O15 on chro... 40 5.0
34emb|AL050401.5|HSJ519P24 Human DNA sequence from clone RP3-519P2... 40 5.0
35gb|AY129673.1| Kluyveromyces lactis protein kinase C (PKC1) gene... 40 5.0
36gb|AC161410.3| Mus musculus chromosome 8, clone RP23-399J5, comp... 40 5.0
37emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS... 40 5.0
38emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 5.0
39emb|AL645913.12| Mouse DNA sequence from clone RP23-194G14 on ch... 40 5.0
40emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, B... 40 5.0
41emb|AL589722.17| Mouse DNA sequence from clone RP23-169M24 on ch... 40 5.0
42gb|AC174824.3| Cavia porcellus clone CH234-33F4, complete sequence 40 5.0
43gb|AC099340.3| Homo sapiens BAC clone RP11-214O14 from 4, comple... 40 5.0
44dbj|AK046535.1| Mus musculus adult male adrenal gland cDNA, RIKE... 40 5.0
45gb|AC175674.2| Gallus gallus BAC clone CH261-137E22 from chromos... 40 5.0
46dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
47emb|AL844591.6| Mouse DNA sequence from clone RP23-414J11 on chr... 40 5.0
48gb|AC013406.7| Homo sapiens BAC clone RP11-341F20 from 2, comple... 40 5.0
49dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
50dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
51gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putativ... 40 5.0
52gb|AY112063.1| Zea mays CL922_1 mRNA sequence 40 5.0
53gb|AC153593.4| Mus musculus 6 BAC RP23-131B11 (Roswell Park Canc... 40 5.0
54gb|AC156506.4| Mus musculus 6 BAC RP24-266P6 (Roswell Park Cance... 40 5.0
55gb|AE003828.4| Drosophila melanogaster chromosome 2R, section 22... 40 5.0
56emb|BX294124.8| Mouse DNA sequence from clone RP23-80H12 on chro... 40 5.0
57gb|AC154313.2| Mus musculus BAC clone RP23-354M21 from chromosom... 40 5.0
58gb|AC129214.5| Mus musculus BAC clone RP24-426N11 from 16, compl... 40 5.0
59emb|AL672089.17| Mouse DNA sequence from clone RP23-295D9 on chr... 40 5.0
60emb|AL806517.9| Mouse DNA sequence from clone RP23-20K17 on chro... 40 5.0
61emb|AL592450.8| Mouse DNA sequence from clone RP23-282N6 on chro... 40 5.0 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  131 bits (66), Expect = 2e-27
 Identities = 102/114 (89%)
 Strand = Plus / Plus

                                                                            
Query: 181      gggggcacccggttctcgacggggatctcggtgaactcggacaggatggcccggaactcg 240
                ||||| |||||||||||||| |||||||| ||||||||||| || || |||| |||||||
Sbjct: 27341131 gggggaacccggttctcgacagggatctccgtgaactcggagagaatcgccctgaactcg 27341190

                                                                      
Query: 241      tcgccgctcagcgtctccttctccaggagcacctccacgatcttgtccatggcc 294
                || || ||||  ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 27341191 tcaccactcaatgtctccttctcaaggagcacctccacgatcttgtccatggcc 27341244



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 71/84 (84%)
 Strand = Plus / Plus

                                                                           
Query: 220     gacaggatggcccggaactcgtcgccgctcagcgtctccttctccaggagcacctccacg 279
               |||| ||| |||| ||||||||||||||  |||||||||||||||| |||||| ||||| 
Sbjct: 6712294 gacaagatcgccctgaactcgtcgccgccgagcgtctccttctccatgagcacgtccacc 6712353

                                       
Query: 280     atcttgtccatggccacgcggttc 303
               | || ||| |||||  ||||||||
Sbjct: 6712354 agctggtcgatggcggcgcggttc 6712377
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>dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0686E06
          Length = 150474

 Score =  131 bits (66), Expect = 2e-27
 Identities = 102/114 (89%)
 Strand = Plus / Plus

                                                                         
Query: 181   gggggcacccggttctcgacggggatctcggtgaactcggacaggatggcccggaactcg 240
             ||||| |||||||||||||| |||||||| ||||||||||| || || |||| |||||||
Sbjct: 83958 gggggaacccggttctcgacagggatctccgtgaactcggagagaatcgccctgaactcg 84017

                                                                   
Query: 241   tcgccgctcagcgtctccttctccaggagcacctccacgatcttgtccatggcc 294
             || || ||||  ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 84018 tcaccactcaatgtctccttctcaaggagcacctccacgatcttgtccatggcc 84071
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>dbj|AK072047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G24, full
            insert sequence
          Length = 2183

 Score =  131 bits (66), Expect = 2e-27
 Identities = 102/114 (89%)
 Strand = Plus / Minus

                                                                        
Query: 181  gggggcacccggttctcgacggggatctcggtgaactcggacaggatggcccggaactcg 240
            ||||| |||||||||||||| |||||||| ||||||||||| || || |||| |||||||
Sbjct: 2009 gggggaacccggttctcgacagggatctccgtgaactcggagagaatcgccctgaactcg 1950

                                                                  
Query: 241  tcgccgctcagcgtctccttctccaggagcacctccacgatcttgtccatggcc 294
            || || ||||  ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1949 tcaccactcaatgtctccttctcaaggagcacctccacgatcttgtccatggcc 1896
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>dbj|AK064913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M12, full
            insert sequence
          Length = 2433

 Score =  131 bits (66), Expect = 2e-27
 Identities = 102/114 (89%)
 Strand = Plus / Minus

                                                                        
Query: 181  gggggcacccggttctcgacggggatctcggtgaactcggacaggatggcccggaactcg 240
            ||||| |||||||||||||| |||||||| ||||||||||| || || |||| |||||||
Sbjct: 2259 gggggaacccggttctcgacagggatctccgtgaactcggagagaatcgccctgaactcg 2200

                                                                  
Query: 241  tcgccgctcagcgtctccttctccaggagcacctccacgatcttgtccatggcc 294
            || || ||||  ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2199 tcaccactcaatgtctccttctcaaggagcacctccacgatcttgtccatggcc 2146
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>dbj|AK060805.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F12, full
            insert sequence
          Length = 2276

 Score =  123 bits (62), Expect = 4e-25
 Identities = 101/114 (88%)
 Strand = Plus / Minus

                                                                        
Query: 181  gggggcacccggttctcgacggggatctcggtgaactcggacaggatggcccggaactcg 240
            ||||| |||||||||||||| |||||||| ||| ||||||| || || |||| |||||||
Sbjct: 2069 gggggaacccggttctcgacagggatctccgtggactcggagagaatcgccctgaactcg 2010

                                                                  
Query: 241  tcgccgctcagcgtctccttctccaggagcacctccacgatcttgtccatggcc 294
            || || ||||  ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2009 tcaccactcaatgtctccttctcaaggagcacctccacgatcttgtccatggcc 1956
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>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0425F05
          Length = 162858

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 71/84 (84%)
 Strand = Plus / Plus

                                                                          
Query: 220    gacaggatggcccggaactcgtcgccgctcagcgtctccttctccaggagcacctccacg 279
              |||| ||| |||| ||||||||||||||  |||||||||||||||| |||||| ||||| 
Sbjct: 146420 gacaagatcgccctgaactcgtcgccgccgagcgtctccttctccatgagcacgtccacc 146479

                                      
Query: 280    atcttgtccatggccacgcggttc 303
              | || ||| |||||  ||||||||
Sbjct: 146480 agctggtcgatggcggcgcggttc 146503
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>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0525F01
          Length = 151668

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 71/84 (84%)
 Strand = Plus / Plus

                                                                         
Query: 220   gacaggatggcccggaactcgtcgccgctcagcgtctccttctccaggagcacctccacg 279
             |||| ||| |||| ||||||||||||||  |||||||||||||||| |||||| ||||| 
Sbjct: 41973 gacaagatcgccctgaactcgtcgccgccgagcgtctccttctccatgagcacgtccacc 42032

                                     
Query: 280   atcttgtccatggccacgcggttc 303
             | || ||| |||||  ||||||||
Sbjct: 42033 agctggtcgatggcggcgcggttc 42056
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>gb|AY105892.1| Zea mays PCO103778 mRNA sequence
          Length = 2203

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 229  gcccggaactcgtcgccgctcagcgtctccttctccaggagcacctccacgatcttgtcc 288
            |||||||||||||| |||  ||| ||||||||||| | ||||||||| ||||| ||||| 
Sbjct: 1865 gcccggaactcgtctccggccagtgtctccttctcaatgagcacctcaacgattttgtcg 1806

                  
Query: 289  atggcc 294
            ||||||
Sbjct: 1805 atggcc 1800
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>dbj|AK063733.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-E10, full
           insert sequence
          Length = 694

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 70/84 (83%)
 Strand = Plus / Minus

                                                                       
Query: 220 gacaggatggcccggaactcgtcgccgctcagcgtctccttctccaggagcacctccacg 279
           |||| ||| |||| ||||||||||||||  |||||||||| ||||| |||||| ||||| 
Sbjct: 497 gacaagatcgccctgaactcgtcgccgccgagcgtctcctcctccatgagcacgtccacc 438

                                   
Query: 280 atcttgtccatggccacgcggttc 303
           | || ||| |||||  ||||||||
Sbjct: 437 agctggtcgatggcggcgcggttc 414
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>gb|AC121144.11| Mus musculus chromosome 3, clone RP24-202D19, complete sequence
          Length = 161989

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 102   acaagagcagcaacaacaaaaa 123
             ||||||||||||||||||||||
Sbjct: 41632 acaagagcagcaacaacaaaaa 41611
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>gb|AC151331.2| Xenopus tropicalis clone ISB-302M5, complete sequence
          Length = 85788

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 3     aaggagtaattacatcttataattaa 28
             |||||||||||| |||||||||||||
Sbjct: 58403 aaggagtaattatatcttataattaa 58428
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>gb|AC098743.3| Mus musculus BAC clone RP23-122O4 from 1, complete sequence
          Length = 225868

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 75    tgtacatccaagaaatatgaac 96
             ||||||||||||||||||||||
Sbjct: 84963 tgtacatccaagaaatatgaac 84984
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>emb|AL031289.1|HS739H11 Human DNA sequence from clone RP4-739H11 on chromosome 1p33-34.2 Contains
              the RIMS3 gene for regulating synaptic membrane exocytosis
              3, a general transcription factor IIF, polypeptide 2, 30kDa
              (GTF2F2) pseudogene, a novel gene and the 5' end of the
              NFYC gene for nuclear transcription factor Y, gamma,
              complete sequence
          Length = 129950

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 255    ctccttctccaggagcacctcc 276
              ||||||||||||||||||||||
Sbjct: 127047 ctccttctccaggagcacctcc 127068
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>dbj|AB236774.1| Trifolium pratense RNA for putative zinc dependent protease, complete
            cds, clone: C1597
          Length = 2290

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 253  gtctccttctccaggagcacctccacgatcttgtccatggcc 294
            |||||||||||||| || || ||||||||||| || ||||||
Sbjct: 1992 gtctccttctccagtaggacttccacgatcttatcgatggcc 1951
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>emb|AL354740.29| Human DNA sequence from clone RP11-513I15 on chromosome 6 Contains the 5'
              end of the GRM4 gene for glutamate receptor metabotropic 4,
              keratin 18 pseudogene 1 (KRT18P1), a cytochrome c, somatic
              (CYCS) pseudogene, the HMGA1 gene for high mobility group
              AT-hook 1, a ribosomal protein L35 (RPL35) pseudogene, part
              of a novel gene and CpG islands, complete sequence
          Length = 151828

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 112    caacaacaaaaaactttccaa 132
              |||||||||||||||||||||
Sbjct: 118862 caacaacaaaaaactttccaa 118882
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>emb|BX649413.8| Mouse DNA sequence from clone RP23-193P21 on chromosome 4 Contains the
             5' end of the Dbccr1 gene for deleted in bladder cancer 1,
             complete sequence
          Length = 186197

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 102   acaagagcagcaacaacaaaa 122
             |||||||||||||||||||||
Sbjct: 92768 acaagagcagcaacaacaaaa 92788
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 246     gctcagcgtctccttctccag 266
               |||||||||||||||||||||
Sbjct: 5692709 gctcagcgtctccttctccag 5692689
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>gb|AC153433.6| Mus musculus 10 BAC RP23-69K22 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 200061

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 7     agtaattacatcttataatta 27
             |||||||||||||||||||||
Sbjct: 59640 agtaattacatcttataatta 59660
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>gb|AC009343.9| Drosophila melanogaster clone BACR08L17, complete sequence
          Length = 182492

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   acaagagcagcaacaacaaa 121
             ||||||||||||||||||||
Sbjct: 49803 acaagagcagcaacaacaaa 49784
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>gb|AC158803.11| Mus musculus 10 BAC RP24-186E11 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 168941

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   gcggttctccctcacctgct 316
             ||||||||||||||||||||
Sbjct: 88027 gcggttctccctcacctgct 88008
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>gb|AC122893.6| Mus musculus BAC clone RP23-67C3 from chromosome 17, complete sequence
          Length = 206456

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 102    acaagagcagcaacaacaaaaaac 125
              |||| |||||||||||||||||||
Sbjct: 123523 acaacagcagcaacaacaaaaaac 123546
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>ref|XM_458917.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D11330g)
           partial mRNA
          Length = 3066

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 76  gtacatccaagaaatatgaa 95
           ||||||||||||||||||||
Sbjct: 587 gtacatccaagaaatatgaa 606
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>ref|XM_454238.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E06413g predicted mRNA
          Length = 3486

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  acaagagcagcaacaacaaa 121
            ||||||||||||||||||||
Sbjct: 2205 acaagagcagcaacaacaaa 2224
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>gb|AC113095.14| Mus musculus chromosome 9, clone RP23-311A1, complete sequence
          Length = 205429

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 102    acaagagcagcaacaacaaaaaac 125
              ||||||||| ||||||||||||||
Sbjct: 163435 acaagagcaacaacaacaaaaaac 163458
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>gb|AC123532.4| Mus musculus chromosome 14 clone RP23-84B6, complete sequence
          Length = 166421

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   ccttctccaggagcacctcc 276
             ||||||||||||||||||||
Sbjct: 65745 ccttctccaggagcacctcc 65726
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>ref|XM_815304.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053506459.270) partial mRNA
          Length = 3111

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 101  tacaagagcagcaacaacaa 120
            ||||||||||||||||||||
Sbjct: 2336 tacaagagcagcaacaacaa 2355
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>gb|AC098877.3| Mus musculus BAC clone RP23-2C24 from 14, complete sequence
          Length = 240151

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   ccttctccaggagcacctcc 276
             ||||||||||||||||||||
Sbjct: 95869 ccttctccaggagcacctcc 95850
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>gb|AC124195.4| Mus musculus BAC clone RP23-285G17 from 16, complete sequence
          Length = 196102

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 102   acaagagcagcaacaacaaaaaac 125
             |||| |||||||||||||||||||
Sbjct: 73128 acaacagcagcaacaacaaaaaac 73151
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>gb|AC158340.9| Mus musculus chromosome 1, clone RP24-161N8, complete sequence
          Length = 163123

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   aagagcagcaacaacaaaaa 123
             ||||||||||||||||||||
Sbjct: 54031 aagagcagcaacaacaaaaa 54012
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>gb|AC102781.5| Mus musculus chromosome 1, clone RP23-271G2, complete sequence
          Length = 198393

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    aagagcagcaacaacaaaaa 123
              ||||||||||||||||||||
Sbjct: 195517 aagagcagcaacaacaaaaa 195536
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>gb|AC104323.27| Mus musculus strain C57BL/6J chromosome 17 clone rp23-114o8 map 17,
             complete sequence
          Length = 202430

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 102   acaagagcagcaacaacaaaaaac 125
             |||| |||||||||||||||||||
Sbjct: 56088 acaacagcagcaacaacaaaaaac 56111
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>gb|AY143411.1| Buellia elegans internal transcribed spacer 1, partial sequence;
           5.8S ribosomal RNA gene, complete sequence; and internal
           transcribed spacer 2; partial sequence
          Length = 514

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 106 gagcagcaacaacaaaaaactttc 129
           ||||||||||||| ||||||||||
Sbjct: 182 gagcagcaacaacgaaaaactttc 205
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>emb|AL354872.9| Human DNA sequence from clone RP11-42O15 on chromosome 1 Contains the
             CTH gene for cystathionase (cystathionine gamma-lyase) and
             a cysteine and histidine-rich domain (CHORD)-containing
             zinc binding protein 1 (CHORDC1) pseudogene, complete
             sequence
          Length = 151777

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   aagagcagcaacaacaaaaa 123
             ||||||||||||||||||||
Sbjct: 52534 aagagcagcaacaacaaaaa 52515
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>emb|AL050401.5|HSJ519P24 Human DNA sequence from clone RP3-519P24 on chromosome Xq22.1-23
            Contains part of the IL1RAPL2 gene for interleukin 1
            receptor accessory protein-like 2 and a prohibitin (PHB)
            pseudogene, complete sequence
          Length = 112203

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   tgcctcgagcaggaattagt 75
            ||||||||||||||||||||
Sbjct: 5289 tgcctcgagcaggaattagt 5308
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>gb|AY129673.1| Kluyveromyces lactis protein kinase C (PKC1) gene, complete cds
          Length = 4301

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  acaagagcagcaacaacaaa 121
            ||||||||||||||||||||
Sbjct: 2811 acaagagcagcaacaacaaa 2830
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>gb|AC161410.3| Mus musculus chromosome 8, clone RP23-399J5, complete sequence
          Length = 196119

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 102   acaagagcagcaacaacaaaaaac 125
             |||| |||||||||||||||||||
Sbjct: 49815 acaacagcagcaacaacaaaaaac 49838
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>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces
              hansenii
          Length = 1602771

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     gtacatccaagaaatatgaa 95
              ||||||||||||||||||||
Sbjct: 845724 gtacatccaagaaatatgaa 845743
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>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 2234072

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    acaagagcagcaacaacaaa 121
              ||||||||||||||||||||
Sbjct: 578950 acaagagcagcaacaacaaa 578931
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>emb|AL645913.12| Mouse DNA sequence from clone RP23-194G14 on chromosome 11 Contains the
             3' end of gene 9130006A14Rik, the 5' end of the Rnf130
             gene for ring finger protein 130 and a CpG island,
             complete sequence
          Length = 131007

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   agcagcaacaacaaaaaact 126
             ||||||||||||||||||||
Sbjct: 39136 agcagcaacaacaaaaaact 39155
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>emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, BAC clone T21J18
          Length = 82912

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   agagcagcaacaacaaaaaa 124
             ||||||||||||||||||||
Sbjct: 56111 agagcagcaacaacaaaaaa 56092
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>emb|AL589722.17| Mouse DNA sequence from clone RP23-169M24 on chromosome 13 Contains the
             gene for a novel protein similar to ribosomal protein S8
             (Rps8) and a CpG island, complete sequence
          Length = 200125

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   cagcaacaacaaaaaacttt 128
             ||||||||||||||||||||
Sbjct: 50071 cagcaacaacaaaaaacttt 50090
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>gb|AC174824.3| Cavia porcellus clone CH234-33F4, complete sequence
          Length = 176892

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 102   acaagagcagcaacaacaaaaaac 125
             |||| |||||||||||||||||||
Sbjct: 43422 acaatagcagcaacaacaaaaaac 43445
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>gb|AC099340.3| Homo sapiens BAC clone RP11-214O14 from 4, complete sequence
          Length = 164958

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 112  caacaacaaaaaactttcca 131
            ||||||||||||||||||||
Sbjct: 2046 caacaacaaaaaactttcca 2027
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>dbj|AK046535.1| Mus musculus adult male adrenal gland cDNA, RIKEN full-length
            enriched library, clone:B330017C21
            product:phosphodiesterase 10A, full insert sequence
          Length = 3676

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 102  acaagagcagcaacaacaaaaaac 125
            |||| |||||||||||||||||||
Sbjct: 3650 acaacagcagcaacaacaaaaaac 3673
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>gb|AC175674.2| Gallus gallus BAC clone CH261-137E22 from chromosome ul, complete
              sequence
          Length = 216348

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    gccgctcagcgtctccttct 262
              ||||||||||||||||||||
Sbjct: 173609 gccgctcagcgtctccttct 173628
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 303      ctccctcacctgctgcagcg 322
                ||||||||||||||||||||
Sbjct: 20571688 ctccctcacctgctgcagcg 20571707
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>emb|AL844591.6| Mouse DNA sequence from clone RP23-414J11 on chromosome 2, complete
              sequence
          Length = 215003

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    agcagcaacaacaaaaaact 126
              ||||||||||||||||||||
Sbjct: 129973 agcagcaacaacaaaaaact 129954
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>gb|AC013406.7| Homo sapiens BAC clone RP11-341F20 from 2, complete sequence
          Length = 190018

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    caacaacaaaaaactttcca 131
              ||||||||||||||||||||
Sbjct: 166017 caacaacaaaaaactttcca 166036
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>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1254_E07
          Length = 124028

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   ctccctcacctgctgcagcg 322
             ||||||||||||||||||||
Sbjct: 89335 ctccctcacctgctgcagcg 89354
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>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0515E01
          Length = 140063

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   ctccctcacctgctgcagcg 322
             ||||||||||||||||||||
Sbjct: 37346 ctccctcacctgctgcagcg 37365
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>gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putative genetic modifier,
             hypothetical protein, putative NAM protein, putative
             cis-zeatin O-glucosyltransferases, putative small nuclear
             ribonucleoprotein, putative cis-zeatin
             O-glucosyltransferase, putative glutathione peroxidase,
             putative copper-exporting ATPases, putative
             serine/threonine dehydratase, and putative actin
             depolymerizing factor genes, complete cds; and
             hypothetical protein gene, partial cds
          Length = 157237

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   ctcggtgaactcggacagga 226
             ||||||||||||||||||||
Sbjct: 96283 ctcggtgaactcggacagga 96264



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   ctcggtgaactcggacagga 226
             ||||||||||||||||||||
Sbjct: 69455 ctcggtgaactcggacagga 69436
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>gb|AY112063.1| Zea mays CL922_1 mRNA sequence
          Length = 860

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 339 gtccgacagctgcttcaccgccga 362
           |||||||||||||| |||||||||
Sbjct: 321 gtccgacagctgctccaccgccga 298
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>gb|AC153593.4| Mus musculus 6 BAC RP23-131B11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 205164

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    aagagcagcaacaacaaaaa 123
              ||||||||||||||||||||
Sbjct: 190975 aagagcagcaacaacaaaaa 190956
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>gb|AC156506.4| Mus musculus 6 BAC RP24-266P6 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 164284

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    aagagcagcaacaacaaaaa 123
              ||||||||||||||||||||
Sbjct: 138294 aagagcagcaacaacaaaaa 138313
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>gb|AE003828.4| Drosophila melanogaster chromosome 2R, section 22 of 73 of the complete
             sequence
          Length = 257907

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   acaagagcagcaacaacaaa 121
             ||||||||||||||||||||
Sbjct: 41717 acaagagcagcaacaacaaa 41698
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>emb|BX294124.8| Mouse DNA sequence from clone RP23-80H12 on chromosome X, complete
             sequence
          Length = 181854

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   aagagcagcaacaacaaaaa 123
             ||||||||||||||||||||
Sbjct: 33622 aagagcagcaacaacaaaaa 33641
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>gb|AC154313.2| Mus musculus BAC clone RP23-354M21 from chromosome 12, complete
             sequence
          Length = 220909

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   aagagcagcaacaacaaaaa 123
             ||||||||||||||||||||
Sbjct: 62249 aagagcagcaacaacaaaaa 62268
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>gb|AC129214.5| Mus musculus BAC clone RP24-426N11 from 16, complete sequence
          Length = 191966

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   acaagagcagcaacaacaaa 121
             ||||||||||||||||||||
Sbjct: 98446 acaagagcagcaacaacaaa 98427
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>emb|AL672089.17| Mouse DNA sequence from clone RP23-295D9 on chromosome X, complete
             sequence
          Length = 215390

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   agagcagcaacaacaaaaaa 124
             ||||||||||||||||||||
Sbjct: 34331 agagcagcaacaacaaaaaa 34312
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>emb|AL806517.9| Mouse DNA sequence from clone RP23-20K17 on chromosome 4, complete
             sequence
          Length = 192432

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   agcagcaacaacaaaaaact 126
             ||||||||||||||||||||
Sbjct: 30644 agcagcaacaacaaaaaact 30625
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>emb|AL592450.8| Mouse DNA sequence from clone RP23-282N6 on chromosome 1, complete
             sequence
          Length = 132639

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   agcagcaacaacaaaaaact 126
             ||||||||||||||||||||
Sbjct: 24716 agcagcaacaacaaaaaact 24735


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,188,830
Number of Sequences: 3902068
Number of extensions: 3188830
Number of successful extensions: 98275
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98018
Number of HSP's gapped (non-prelim): 257
length of query: 378
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 356
effective length of database: 17,147,199,772
effective search space: 6104403118832
effective search space used: 6104403118832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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