ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet32g11 |
|---|---|
| Clone Library Name | barley_pub |
>SCRK1_ORYSA (Q944F4) Fructokinase-1 (EC 2.7.1.4) (Fructokinase I) (OsFKI)| Length = 323 Score = 98.2 bits (243), Expect = 4e-21 Identities = 48/59 (81%), Positives = 54/59 (91%) Frame = -2 Query: 362 FIGSLLRKIVQDPSALQDKKKLEAVIKFANACGAITATKKGAIPSLPKEEEVLRLMEKA 186 F+G+LLR+IVQDPS+LQD+KKLE IKFANACGAITATKKGAIPSLP E EVL+LME A Sbjct: 265 FVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKKGAIPSLPTEVEVLKLMESA 323
>SCRK1_MAIZE (Q6XZ79) Fructokinase-1 (EC 2.7.1.4) (ZmFRK1)| Length = 323 Score = 90.5 bits (223), Expect = 9e-19 Identities = 44/59 (74%), Positives = 53/59 (89%) Frame = -2 Query: 362 FIGSLLRKIVQDPSALQDKKKLEAVIKFANACGAITATKKGAIPSLPKEEEVLRLMEKA 186 F+G+LL++IV+DPS+LQD+KKL IKFANACGAIT TKKGAIPSLP E EVL+L+EKA Sbjct: 265 FVGALLQRIVKDPSSLQDEKKLVESIKFANACGAITTTKKGAIPSLPTEAEVLQLIEKA 323
>SCRK_SOLTU (P37829) Fructokinase (EC 2.7.1.4)| Length = 319 Score = 70.1 bits (170), Expect = 1e-12 Identities = 32/57 (56%), Positives = 45/57 (78%) Frame = -2 Query: 362 FIGSLLRKIVQDPSALQDKKKLEAVIKFANACGAITATKKGAIPSLPKEEEVLRLME 192 F+G+LL KIV D + L+D+ +L+ V++F+ ACGAIT TKKGAIP+LP E E L L++ Sbjct: 260 FVGALLTKIVDDQAILEDEARLKEVLRFSCACGAITTTKKGAIPALPTESEALTLLK 316
>SCRK2_ORYSA (Q944F5) Fructokinase-2 (EC 2.7.1.4) (Fructokinase II) (OsFKII)| Length = 336 Score = 61.2 bits (147), Expect = 6e-10 Identities = 29/59 (49%), Positives = 39/59 (66%) Frame = -2 Query: 362 FIGSLLRKIVQDPSALQDKKKLEAVIKFANACGAITATKKGAIPSLPKEEEVLRLMEKA 186 F+GSLL + +D S +++KL +KF+NACGAI TKKGAIP+LP L+ KA Sbjct: 276 FVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPTVAVAQELISKA 334
>SCRK2_MAIZE (Q6XZ78) Fructokinase-2 (EC 2.7.1.4) (ZmFRK2)| Length = 335 Score = 60.5 bits (145), Expect = 1e-09 Identities = 29/59 (49%), Positives = 39/59 (66%) Frame = -2 Query: 362 FIGSLLRKIVQDPSALQDKKKLEAVIKFANACGAITATKKGAIPSLPKEEEVLRLMEKA 186 F+GSLL + +D S +++KL +KF+NACGAI TKKGAIP+LP L+ KA Sbjct: 276 FVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPTVATAQDLIAKA 334
>RBSK_HAEIN (P44331) Ribokinase (EC 2.7.1.15)| Length = 306 Score = 41.2 bits (95), Expect = 6e-04 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = -2 Query: 323 SALQDKKKLEAVIKFANACGAITATKKGAIPSLPKEEEVLRLMEKA 186 +AL ++K + I+F A AI+ TKKGA S+P +E L +E A Sbjct: 261 TALLEEKSFDEAIRFGQAAAAISVTKKGAQSSIPTRQETLEFLEHA 306
>RBSK_ECOLI (P0A9J6) Ribokinase (EC 2.7.1.15)| Length = 309 Score = 40.8 bits (94), Expect = 8e-04 Identities = 19/45 (42%), Positives = 30/45 (66%) Frame = -2 Query: 323 SALQDKKKLEAVIKFANACGAITATKKGAIPSLPKEEEVLRLMEK 189 +AL ++K L I+FA+A AI T+KGA PS+P EE+ +++ Sbjct: 263 TALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSVPWREEIDAFLDR 307
>RBSK_ECO57 (P0A9J7) Ribokinase (EC 2.7.1.15)| Length = 309 Score = 40.8 bits (94), Expect = 8e-04 Identities = 19/45 (42%), Positives = 30/45 (66%) Frame = -2 Query: 323 SALQDKKKLEAVIKFANACGAITATKKGAIPSLPKEEEVLRLMEK 189 +AL ++K L I+FA+A AI T+KGA PS+P EE+ +++ Sbjct: 263 TALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSVPWREEIDAFLDR 307
>SCRK_VIBAL (P22824) Fructokinase (EC 2.7.1.4)| Length = 307 Score = 39.3 bits (90), Expect = 0.002 Identities = 19/56 (33%), Positives = 35/56 (62%) Frame = -2 Query: 362 FIGSLLRKIVQDPSALQDKKKLEAVIKFANACGAITATKKGAIPSLPKEEEVLRLM 195 F+G LL + + ++ + + I++AN CGA+ T+KGA+ +LP + E+LR + Sbjct: 251 FVGGLLACLSRHAD-WKNHPVVSSAIQWANGCGALATTQKGAMTALPTQTELLRFI 305
>YDJE_BACSU (O34768) Hypothetical sugar kinase ydjE| Length = 320 Score = 37.4 bits (85), Expect = 0.009 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Frame = -2 Query: 362 FIGSLLRKIV---QDPSALQDKKKLEAVIKFANACGAITATKKGAIPSLPKEEEV 207 F+G+ L ++ Q S D KL ++ FAN GA+ TK GAI +LP +E+ Sbjct: 262 FVGAALYQLANTDQIQSVDADFVKLREIVAFANKVGALVCTKIGAIDALPSLDEI 316
>SCRK_ECOLI (P40713) Fructokinase (EC 2.7.1.4)| Length = 307 Score = 34.3 bits (77), Expect = 0.075 Identities = 13/35 (37%), Positives = 23/35 (65%) Frame = -2 Query: 311 DKKKLEAVIKFANACGAITATKKGAIPSLPKEEEV 207 D++++ +I A CGA+ T KGA+ +LP +E+ Sbjct: 269 DEREMRRIIDLAQRCGALAVTAKGAMTALPCRQEL 303
>SCRK_SALTY (P26984) Fructokinase (EC 2.7.1.4)| Length = 307 Score = 33.1 bits (74), Expect = 0.17 Identities = 17/54 (31%), Positives = 27/54 (50%) Frame = -2 Query: 362 FIGSLLRKIVQDPSALQDKKKLEAVIKFANACGAITATKKGAIPSLPKEEEVLR 201 F+ LL + + D LE + A CGA+ T KGA+ +LP + ++ R Sbjct: 253 FVAGLLASLAANGMPT-DMTALEPTLTLAQTCGALATTAKGAMTALPYQRDLNR 305
>SCRK_SALTH (P24261) Fructokinase (EC 2.7.1.4) (Fragment)| Length = 221 Score = 33.1 bits (74), Expect = 0.17 Identities = 17/54 (31%), Positives = 27/54 (50%) Frame = -2 Query: 362 FIGSLLRKIVQDPSALQDKKKLEAVIKFANACGAITATKKGAIPSLPKEEEVLR 201 F+ LL + + D LE + A CGA+ T KGA+ +LP + ++ R Sbjct: 167 FVAGLLASLAANGMPT-DMTALEPTLTLAQTCGALATTAKGAMTALPYQRDLNR 219
>PHT16_ARATH (Q9ZWT3) Inorganic phosphate transporter 1-6 (AtPht1;6) (H(+)/Pi| cotransporter) Length = 516 Score = 30.0 bits (66), Expect = 1.4 Identities = 23/80 (28%), Positives = 40/80 (50%) Frame = +1 Query: 106 YTLLLIQNSVQYNLQNTKLLEIISRIYAFSISRNTSSSLGNEGIAPFFVAVIAPHALANL 285 YT L+ +N+ Q L TK+L + S ++N + + ++ F + + H L L Sbjct: 243 YTALVSKNAEQAALDMTKVLNVDIEA---SAAKNDQARVSSDEFGLFSMKFLRRHGLHLL 299 Query: 286 ITASSFFLSCNADGSWTIFR 345 TAS++FL A S +F+ Sbjct: 300 GTASTWFLLDIAFYSQNLFQ 319
>MURA2_BACHK (Q6HAU9) UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (EC| 2.5.1.7) (Enoylpyruvate transferase 2) (UDP-N-acetylglucosamine enolpyruvyl transferase 2) (EPT 2) Length = 429 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = +3 Query: 63 IGQNKKASRGILGGIHLAPDPKQRTIQFAKYEATGNH 173 +G+ KKA G+ GG HL P P + I+ +EA G H Sbjct: 103 LGRFKKAVIGLPGGCHLGPRPIDQHIK--GFEALGAH 137
>MURA2_BACCZ (Q630R4) UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (EC| 2.5.1.7) (Enoylpyruvate transferase 2) (UDP-N-acetylglucosamine enolpyruvyl transferase 2) (EPT 2) Length = 429 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = +3 Query: 63 IGQNKKASRGILGGIHLAPDPKQRTIQFAKYEATGNH 173 +G+ KKA G+ GG HL P P + I+ +EA G H Sbjct: 103 LGRFKKAVIGLPGGCHLGPRPIDQHIK--GFEALGAH 137
>MURA2_BACCR (Q814T6) UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (EC| 2.5.1.7) (Enoylpyruvate transferase 2) (UDP-N-acetylglucosamine enolpyruvyl transferase 2) (EPT 2) Length = 429 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = +3 Query: 63 IGQNKKASRGILGGIHLAPDPKQRTIQFAKYEATGNH 173 +G+ KKA G+ GG HL P P + I+ +EA G H Sbjct: 103 LGRFKKAVIGLPGGCHLGPRPIDQHIK--GFEALGAH 137
>MURA2_BACC1 (Q72XB5) UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (EC| 2.5.1.7) (Enoylpyruvate transferase 2) (UDP-N-acetylglucosamine enolpyruvyl transferase 2) (EPT 2) Length = 429 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = +3 Query: 63 IGQNKKASRGILGGIHLAPDPKQRTIQFAKYEATGNH 173 +G+ KKA G+ GG HL P P + I+ +EA G H Sbjct: 103 LGRFKKAVIGLPGGCHLGPRPIDQHIK--GFEALGAH 137
>MURA2_BACAN (Q81JW5) UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (EC| 2.5.1.7) (Enoylpyruvate transferase 2) (UDP-N-acetylglucosamine enolpyruvyl transferase 2) (EPT 2) Length = 429 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = +3 Query: 63 IGQNKKASRGILGGIHLAPDPKQRTIQFAKYEATGNH 173 +G+ KKA G+ GG HL P P + I+ +EA G H Sbjct: 103 LGRFKKAVIGLPGGCHLGPRPIDQHIK--GFEALGAH 137
>LRMP_HUMAN (Q12912) Lymphoid-restricted membrane protein (Jaw1 protein)| Length = 555 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/59 (28%), Positives = 30/59 (50%) Frame = -2 Query: 368 MQFIGSLLRKIVQDPSALQDKKKLEAVIKFANACGAITATKKGAIPSLPKEEEVLRLME 192 ++ + SL D A + KKLE IKF + C A A++ + ++ +E V + +E Sbjct: 254 LKLLESLTPLCEDDNQAQEIIKKLEKSIKFLSQCAARVASRAEMLGAINQESRVSKAVE 312
>SCRK_KLEPN (P26420) Fructokinase (EC 2.7.1.4)| Length = 307 Score = 29.3 bits (64), Expect = 2.4 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = -2 Query: 287 IKFANACGAITATKKGAIPSLPKEEEVLR 201 + A CGA+ T KGA+ +LP ++++ R Sbjct: 277 LALAQTCGALATTAKGAMTALPYKDDLQR 305
>RBSK_SCHPO (O60116) Putative ribokinase (EC 2.7.1.15)| Length = 318 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -2 Query: 299 LEAVIKFANACGAITATKKGAIPSLPKEEEV 207 L+ ++FA C AIT +KGA S+P EV Sbjct: 278 LKDSLEFAAKCSAITVQRKGAASSIPSLLEV 308
>PMD1_SCHPO (P36619) Leptomycin B resistance protein pmd1| Length = 1362 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Frame = +1 Query: 235 IAPFFVAVIAPHALANLITASSFFLSCNADGSWTIFRSRE---PINCITST 378 I FF +IA ++LAN+ F+SC A + IF + + PIN T T Sbjct: 360 IGCFFAVLIASYSLANISPKMQSFVSC-ASAAKKIFDTIDRVSPINAFTPT 409
>PHLD_MYCTU (P0A5R8) Phospholipase C 4 precursor (EC 3.1.4.3)| Length = 514 Score = 28.5 bits (62), Expect = 4.1 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Frame = +1 Query: 85 AGVSWEEY---TLLLIQNSVQYNLQNTKLLEIISRIYAFSISRNTSSSLGNEGIAPFFVA 255 AGVSW+ Y TL I + + Y S + +F S + S L G+AP + A Sbjct: 236 AGVSWKVYRNKTLGPISSVLTYG----------SLVTSFKQSADPRSDLVRFGVAPSYPA 285 Query: 256 VIAPHALANLITASSFFL 309 A LAN + S+ + Sbjct: 286 SFAADVLANRLPRVSWVI 303
>PHLD_MYCBO (P0A5R9) Phospholipase C 4 precursor (EC 3.1.4.3)| Length = 514 Score = 28.5 bits (62), Expect = 4.1 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Frame = +1 Query: 85 AGVSWEEY---TLLLIQNSVQYNLQNTKLLEIISRIYAFSISRNTSSSLGNEGIAPFFVA 255 AGVSW+ Y TL I + + Y S + +F S + S L G+AP + A Sbjct: 236 AGVSWKVYRNKTLGPISSVLTYG----------SLVTSFKQSADPRSDLVRFGVAPSYPA 285 Query: 256 VIAPHALANLITASSFFL 309 A LAN + S+ + Sbjct: 286 SFAADVLANRLPRVSWVI 303
>COX1_NEUCR (P03945) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) Length = 557 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 5/47 (10%) Frame = +2 Query: 218 PWAMKGLPLSSWR*LLH-----MRWQI*SPPQAFSCLAMPMDLGQFF 343 PW++ S R LL+ + W I SPP+ S ++P+ FF Sbjct: 491 PWSIPQFYTDSLRALLNRSYPSLEWSISSPPKPHSFASLPLQSSSFF 537
>RBSK_YEAST (P25332) Probable ribokinase (EC 2.7.1.15)| Length = 333 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/52 (28%), Positives = 27/52 (51%) Frame = -2 Query: 362 FIGSLLRKIVQDPSALQDKKKLEAVIKFANACGAITATKKGAIPSLPKEEEV 207 F+G L+ ++ Q + L IKF+ ++T +KGA S+P ++V Sbjct: 285 FLGGLVTQLYQGET-------LSTAIKFSTLASSLTIQRKGAAESMPLYKDV 329
>POLG_TVMV (P09814) Genome polyprotein [Contains: P1 proteinase (N-terminal| protein); Helper component proteinase (EC 3.4.22.45) (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2 (6K2); Viral gen Length = 3023 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +1 Query: 154 TKLLEIISRIYAFSISRNTSSSLGNEGIAPFFVAVIAPHALANLITA 294 T LL+ I R Y ++I + SL +G+AP+ V AL L T+ Sbjct: 2687 TDLLQNIRRFYKWTIEQEPYRSLAEQGLAPYLSEV----ALRRLYTS 2729
>CAAL2_STRAW (Q82PC4) Carboxylate-amine ligase SAV999 (EC 6.3.-.-)| Length = 366 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = +2 Query: 221 WAMKGLPLSSWR*LLHMRWQI*SPPQAFSCLA 316 WA +SWR ++ RW + PP F+ LA Sbjct: 165 WAGHDTGFASWRTVIFGRWPVSGPPPHFADLA 196
>MEU32_SCHPO (Q9P7N0) Meiotic expression up-regulated protein 32| Length = 392 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +1 Query: 82 QAGVSWEEYTLLLIQNSVQYNLQNTKLLEI 171 ++ +SW T+LLI N++ Y NT +LE+ Sbjct: 198 KSALSWNNETILLIHNAIAYR-TNTGMLEL 226
>ULAG_SHIDS (Q328K5) Probable L-ascorbate-6-phosphate lactonase ulaG (EC| 3.1.1.-) (L-ascorbate utilization protein G) Length = 354 Score = 27.3 bits (59), Expect = 9.2 Identities = 10/29 (34%), Positives = 15/29 (51%) Frame = -1 Query: 303 KA*GGDQICQRMWSNHRHEERGNPFIAQG 217 K+ GG +C W + + GNP + QG Sbjct: 51 KSEGGTNVCVDFWCDTGKQSHGNPLMKQG 79
>ATL5G_ARATH (Q9LF64) Probable RING-H2 finger protein ATL5G| Length = 362 Score = 27.3 bits (59), Expect = 9.2 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = +3 Query: 243 FLRGGDCSTCVGKFDHRLKLFLVLQC 320 F+ G DCS C+ +F+ L L+ +C Sbjct: 136 FVDGSDCSVCLSEFEENESLRLLPKC 161 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,114,637 Number of Sequences: 219361 Number of extensions: 991116 Number of successful extensions: 2880 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 2806 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2880 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
