ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet32g11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190249.1| Oryza sativa (japonica cultivar-group), predic... 107 3e-20
2gb|AF429948.1| Oryza sativa putative fructokinase I mRNA, comple... 107 3e-20
3dbj|AK120887.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
4dbj|AK060500.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 86 9e-14
6dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic D... 86 9e-14
7dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic D... 86 9e-14
8gb|AY104222.1| Zea mays PCO070293 mRNA sequence 58 2e-05
9ref|NM_127294.3| Arabidopsis thaliana protein binding / transcri... 44 0.32
10gb|AC004895.2| Homo sapiens PAC clone RP4-810E6 from 7, complete... 44 0.32
11emb|AL117338.15|HSA490O24 Human DNA sequence from clone RP11-490... 44 0.32
12gb|AY142547.1| Arabidopsis thaliana clone RAFL08-16-B13 (R11303)... 44 0.32
13gb|AC002329.2|AC002329 Arabidopsis thaliana chromosome II sectio... 44 0.32
14gb|AC116501.7| Mus musculus chromosome 5, clone RP24-300D7, comp... 42 1.3
15gb|DQ235199.1| Solanum tuberosum clone 171E03 fructokinase-like ... 42 1.3
16gb|DQ235181.1| Solanum tuberosum clone 163C10 fructokinase-like ... 42 1.3
17gb|AF530592.1| Petunia integrifolia subsp. inflata putative fruc... 42 1.3
18gb|AC125024.6| Mus musculus chromosome 5, clone RP24-320B23, com... 42 1.3
19gb|AC112030.4| Rattus norvegicus 4 BAC CH230-100K8 (Children's H... 42 1.3
20emb|AL353802.14| Human DNA sequence from clone RP4-662P1 on chro... 42 1.3
21gb|AC055120.5| Homo sapiens BAC clone RP11-336N6 from 4, complet... 42 1.3
22emb|AL845256.3| Mouse DNA sequence from clone RP23-58M18 on chro... 42 1.3
23gb|AC166161.2| Mus musculus BAC clone RP23-467M7 from chromosome... 40 5.0
24gb|AC118025.18| Mus musculus chromosome 6, clone RP23-461L9, com... 40 5.0
25gb|AC113599.10| Mus musculus chromosome 18, clone RP23-5D23, com... 40 5.0
26gb|AC124237.13| Mus musculus chromosome 17, clone RP23-281A8, co... 40 5.0
27ref|XM_737478.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 5.0
28gb|AC113010.10| Mus musculus chromosome 18, clone RP23-172F6, co... 40 5.0
29gb|AC095563.7| Rattus norvegicus 9 BAC CH230-7G11 (Children's Ho... 40 5.0
30emb|AL732372.15| Human DNA sequence from clone RP4-669L17 on chr... 40 5.0
31emb|AL627309.15| Human DNA sequence from clone RP11-34P13 on chr... 40 5.0
32emb|AL672310.3| Human DNA sequence from clone RP11-226I21 on chr... 40 5.0
33emb|AL390765.17| Human DNA sequence from clone RP11-509I1 on chr... 40 5.0
34gb|AC091561.4| Homo sapiens chromosome 8, clone RP11-388G22, com... 40 5.0
35gb|AC092670.2| Homo sapiens BAC clone RP11-586D5 from 4, complet... 40 5.0
36gb|AC009334.8| Homo sapiens chromosome 1, clone RP11-45L2, compl... 40 5.0
37gb|AF316500.1|AF316500 Leptospira interrogans strain L170 rfb lo... 40 5.0
38dbj|AK032510.1| Mus musculus adult male olfactory brain cDNA, RI... 40 5.0
39dbj|AK043710.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 40 5.0
40dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
41gb|AC012005.4|AC012005 Homo sapiens clone RP11-533E23, complete ... 40 5.0
42gb|AC136309.9| Homo sapiens chromosome 11, clone RP11-242C5, com... 40 5.0
43gb|AC006328.5|AC006328 Homo sapiens BAC clone RP11-102O5 from Y,... 40 5.0
44ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P... 40 5.0
45gb|AC131281.7| Homo sapiens chromosome 8, clone RP11-585F1, comp... 40 5.0
46gb|AF281920.1|AF281920 Homo sapiens clone 16qtel_c53bt7 sequence 40 5.0
47gb|AC138033.1| Homo sapiens chromosome 5 clone XXcos-B22C66, com... 40 5.0
48gb|AC137934.1| Homo sapiens chromosome 16 clone XXcos-yA11c16, c... 40 5.0
49gb|AC114498.2| Homo sapiens chromosome 1 clone RP5-857K21, compl... 40 5.0
50gb|AC130223.2| Homo sapiens cosmid clone XXcos-2003C17 from 2, c... 40 5.0
51gb|AC134873.2| Homo sapiens cosmid clone XXcos-2003C15 from 2, c... 40 5.0
52dbj|AP005810.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
53dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
54emb|BX649379.10| Human DNA sequence from clone RP5-1040D10 on ch... 40 5.0
55emb|AJ487038.1|CAR487038 Cicer arietinum partial mRNA for fructo... 40 5.0
56gb|AC137743.3| Mus musculus BAC clone RP24-469M15 from 6, comple... 40 5.0
57dbj|AP006222.1| Homo sapiens genomic DNA, chromosome Un, clone:C... 40 5.0
58emb|AL844530.7| Mouse DNA sequence from clone RP23-248L2 on chro... 40 5.0
59emb|AL136038.5|CNS01DVT Human chromosome 14 DNA sequence BAC C-2... 40 5.0 
>ref|NM_190249.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 972

 Score =  107 bits (54), Expect = 3e-20
 Identities = 111/130 (85%)
 Strand = Plus / Minus

                                                                       
Query: 221 tgggcaatgaagggattgcccctttcttcgtggcggtgattgctccacatgcgttggcaa 280
           |||||| ||| ||||||||||||||||| ||||||||||||||||| || || |||||||
Sbjct: 934 tgggcagtgatgggattgcccctttctttgtggcggtgattgctccgcacgcattggcaa 875

                                                                       
Query: 281 atttgatcaccgcctcaagctttttcttgtcttgcaatgccgatggatcttggacaattt 340
           |||| ||| |  |||||||||| ||||  |||||||| |  |||||||| ||||||||| 
Sbjct: 874 atttaatcgcttcctcaagcttcttctgatcttgcaacgatgatggatcctggacaattc 815

                     
Query: 341 ttcggagcag 350
           |||| |||||
Sbjct: 814 ttcgcagcag 805
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>gb|AF429948.1| Oryza sativa putative fructokinase I mRNA, complete cds
          Length = 1135

 Score =  107 bits (54), Expect = 3e-20
 Identities = 111/130 (85%)
 Strand = Plus / Minus

                                                                       
Query: 221 tgggcaatgaagggattgcccctttcttcgtggcggtgattgctccacatgcgttggcaa 280
           |||||| ||| ||||||||||||||||| ||||||||||||||||| || || |||||||
Sbjct: 995 tgggcagtgatgggattgcccctttctttgtggcggtgattgctccgcacgcattggcaa 936

                                                                       
Query: 281 atttgatcaccgcctcaagctttttcttgtcttgcaatgccgatggatcttggacaattt 340
           |||| ||| |  |||||||||| ||||  |||||||| |  |||||||| ||||||||| 
Sbjct: 935 atttaatcgcttcctcaagcttcttctgatcttgcaacgatgatggatcctggacaattc 876

                     
Query: 341 ttcggagcag 350
           |||| |||||
Sbjct: 875 ttcgcagcag 866



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 113  tgctcctgatccaaaacagcgtacaatacaatttgc 148
            ||||||||||||| | |||| |||||||||||||||
Sbjct: 1107 tgctcctgatccagatcagcatacaatacaatttgc 1072
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>dbj|AK120887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029D05, full
           insert sequence
          Length = 1216

 Score =  107 bits (54), Expect = 3e-20
 Identities = 111/130 (85%)
 Strand = Plus / Minus

                                                                       
Query: 221 tgggcaatgaagggattgcccctttcttcgtggcggtgattgctccacatgcgttggcaa 280
           |||||| ||| ||||||||||||||||| ||||||||||||||||| || || |||||||
Sbjct: 800 tgggcagtgatgggattgcccctttctttgtggcggtgattgctccgcacgcattggcaa 741

                                                                       
Query: 281 atttgatcaccgcctcaagctttttcttgtcttgcaatgccgatggatcttggacaattt 340
           |||| ||| |  |||||||||| ||||  |||||||| |  |||||||| ||||||||| 
Sbjct: 740 atttaatcgcttcctcaagcttcttctgatcttgcaacgatgatggatcctggacaattc 681

                     
Query: 341 ttcggagcag 350
           |||| |||||
Sbjct: 680 ttcgcagcag 671



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 113 tgctcctgatccaaaacagcgtacaatacaatttgc 148
           ||||||||||||| | |||| |||||||||||||||
Sbjct: 912 tgctcctgatccagatcagcatacaatacaatttgc 877
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>dbj|AK060500.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-F08, full
            insert sequence
          Length = 1380

 Score =  107 bits (54), Expect = 3e-20
 Identities = 111/130 (85%)
 Strand = Plus / Minus

                                                                        
Query: 221  tgggcaatgaagggattgcccctttcttcgtggcggtgattgctccacatgcgttggcaa 280
            |||||| ||| ||||||||||||||||| ||||||||||||||||| || || |||||||
Sbjct: 1156 tgggcagtgatgggattgcccctttctttgtggcggtgattgctccgcacgcattggcaa 1097

                                                                        
Query: 281  atttgatcaccgcctcaagctttttcttgtcttgcaatgccgatggatcttggacaattt 340
            |||| ||| |  |||||||||| ||||  |||||||| |  |||||||| ||||||||| 
Sbjct: 1096 atttaatcgcttcctcaagcttcttctgatcttgcaacgatgatggatcctggacaattc 1037

                      
Query: 341  ttcggagcag 350
            |||| |||||
Sbjct: 1036 ttcgcagcag 1027



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 113  tgctcctgatccaaaacagcgtacaatacaatttgc 148
            ||||||||||||| | |||| |||||||||||||||
Sbjct: 1268 tgctcctgatccagatcagcatacaatacaatttgc 1233
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 76/87 (87%)
 Strand = Plus / Plus

                                                                            
Query: 221      tgggcaatgaagggattgcccctttcttcgtggcggtgattgctccacatgcgttggcaa 280
                |||||| ||| ||||||||||||||||| ||||||||||||||||| || || |||||||
Sbjct: 38878635 tgggcagtgatgggattgcccctttctttgtggcggtgattgctccgcacgcattggcaa 38878694

                                           
Query: 281      atttgatcaccgcctcaagctttttct 307
                |||| ||| |  |||||||||| ||||
Sbjct: 38878695 atttaatcgcttcctcaagcttcttct 38878721



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                    
Query: 113      tgctcctgatccaaaacagcgtacaatacaatttgc 148
                ||||||||||||| | |||| |||||||||||||||
Sbjct: 38878523 tgctcctgatccagatcagcatacaatacaatttgc 38878558
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>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1078G07
          Length = 199457

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 76/87 (87%)
 Strand = Plus / Plus

                                                                          
Query: 221    tgggcaatgaagggattgcccctttcttcgtggcggtgattgctccacatgcgttggcaa 280
              |||||| ||| ||||||||||||||||| ||||||||||||||||| || || |||||||
Sbjct: 151517 tgggcagtgatgggattgcccctttctttgtggcggtgattgctccgcacgcattggcaa 151576

                                         
Query: 281    atttgatcaccgcctcaagctttttct 307
              |||| ||| |  |||||||||| ||||
Sbjct: 151577 atttaatcgcttcctcaagcttcttct 151603



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 113    tgctcctgatccaaaacagcgtacaatacaatttgc 148
              ||||||||||||| | |||| |||||||||||||||
Sbjct: 151405 tgctcctgatccagatcagcatacaatacaatttgc 151440
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>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0696G06
          Length = 142571

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 76/87 (87%)
 Strand = Plus / Plus

                                                                         
Query: 221   tgggcaatgaagggattgcccctttcttcgtggcggtgattgctccacatgcgttggcaa 280
             |||||| ||| ||||||||||||||||| ||||||||||||||||| || || |||||||
Sbjct: 43421 tgggcagtgatgggattgcccctttctttgtggcggtgattgctccgcacgcattggcaa 43480

                                        
Query: 281   atttgatcaccgcctcaagctttttct 307
             |||| ||| |  |||||||||| ||||
Sbjct: 43481 atttaatcgcttcctcaagcttcttct 43507



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 113   tgctcctgatccaaaacagcgtacaatacaatttgc 148
             ||||||||||||| | |||| |||||||||||||||
Sbjct: 43309 tgctcctgatccagatcagcatacaatacaatttgc 43344
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>gb|AY104222.1| Zea mays PCO070293 mRNA sequence
          Length = 1331

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 221  tgggcaatgaagggattgcccctttcttcgtggcggtgattgctccaca 269
            ||||||| || ||||| || || ||||||||||||||||||||||||||
Sbjct: 1040 tgggcaaagacgggatcgcacccttcttcgtggcggtgattgctccaca 992
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>ref|NM_127294.3| Arabidopsis thaliana protein binding / transcription regulator
            AT2G17390 mRNA, complete cds
          Length = 1427

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 27   ttgcaatcacaaacaaaaaaccctta 52
            ||||||||||||| ||||||||||||
Sbjct: 1366 ttgcaatcacaaagaaaaaaccctta 1391
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>gb|AC004895.2| Homo sapiens PAC clone RP4-810E6 from 7, complete sequence
          Length = 152927

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 35     acaaacaaaaaacccttagtaa 56
              ||||||||||||||||||||||
Sbjct: 117265 acaaacaaaaaacccttagtaa 117286
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>emb|AL117338.15|HSA490O24 Human DNA sequence from clone RP11-490O24 on chromosome 10 Contains a 60S
              ribosomal protein L23 (RPL23) pseudogene and a novel gene,
              complete sequence
          Length = 168778

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 137    aatacaatttgcaaaatacgaa 158
              ||||||||||||||||||||||
Sbjct: 100063 aatacaatttgcaaaatacgaa 100042
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>gb|AY142547.1| Arabidopsis thaliana clone RAFL08-16-B13 (R11303) mRNA sequence
          Length = 1683

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 27   ttgcaatcacaaacaaaaaaccctta 52
            ||||||||||||| ||||||||||||
Sbjct: 1606 ttgcaatcacaaagaaaaaaccctta 1631
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>gb|AC002329.2|AC002329 Arabidopsis thaliana chromosome II section 100 of 255 of the complete
             sequence. Sequence from clones T23A1, F5J6, MJB20
          Length = 76170

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 27    ttgcaatcacaaacaaaaaaccctta 52
             ||||||||||||| ||||||||||||
Sbjct: 58794 ttgcaatcacaaagaaaaaaccctta 58819
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>gb|AC116501.7| Mus musculus chromosome 5, clone RP24-300D7, complete sequence
          Length = 174365

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 35     acaaacaaaaaacccttagta 55
              |||||||||||||||||||||
Sbjct: 131954 acaaacaaaaaacccttagta 131974
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>gb|DQ235199.1| Solanum tuberosum clone 171E03 fructokinase-like mRNA, complete cds
          Length = 1245

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 232  gggattgcccctttcttcgtggcggtgattgctccacatgc 272
            |||||||| |||||||| ||||  ||||| |||||||||||
Sbjct: 1015 gggattgctcctttcttggtggttgtgatggctccacatgc 975
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>gb|DQ235181.1| Solanum tuberosum clone 163C10 fructokinase-like mRNA, complete cds
          Length = 1245

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 232  gggattgcccctttcttcgtggcggtgattgctccacatgc 272
            |||||||| |||||||| ||||  ||||| |||||||||||
Sbjct: 1015 gggattgctcctttcttggtggttgtgatggctccacatgc 975
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>gb|AF530592.1| Petunia integrifolia subsp. inflata putative fructokinase 2 (S1-3.16)
            gene, complete cds
          Length = 9183

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 232  gggattgcccctttcttcgtggcggtgattgctccacatgc 272
            |||||||| |||||||| ||||  ||||| |||||||||||
Sbjct: 7421 gggattgctcctttctttgtggttgtgatggctccacatgc 7381
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>gb|AC125024.6| Mus musculus chromosome 5, clone RP24-320B23, complete sequence
          Length = 192305

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    acaaacaaaaaacccttagta 55
             |||||||||||||||||||||
Sbjct: 28605 acaaacaaaaaacccttagta 28625
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>gb|AC112030.4| Rattus norvegicus 4 BAC CH230-100K8 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 237374

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 67     ggcaaaacaaaaaggcaagca 87
              |||||||||||||||||||||
Sbjct: 114060 ggcaaaacaaaaaggcaagca 114040
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>emb|AL353802.14| Human DNA sequence from clone RP4-662P1 on chromosome 1p31.3-32.3
             Contains part of the gene for InaD-like protein (INADL),
             complete sequence
          Length = 143226

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 35    acaaacaaaaaacccttagta 55
             |||||||||||||||||||||
Sbjct: 26752 acaaacaaaaaacccttagta 26732
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>gb|AC055120.5| Homo sapiens BAC clone RP11-336N6 from 4, complete sequence
          Length = 178524

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 35     acaaacaaaaaacccttagta 55
              |||||||||||||||||||||
Sbjct: 105081 acaaacaaaaaacccttagta 105061
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>emb|AL845256.3| Mouse DNA sequence from clone RP23-58M18 on chromosome X, complete
             sequence
          Length = 171398

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 135   acaatacaatttgcaaaatac 155
             |||||||||||||||||||||
Sbjct: 90704 acaatacaatttgcaaaatac 90684
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>gb|AC166161.2| Mus musculus BAC clone RP23-467M7 from chromosome 17, complete sequence
          Length = 186311

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   atacaatttgcaaaatacga 157
             ||||||||||||||||||||
Sbjct: 53672 atacaatttgcaaaatacga 53691
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>gb|AC118025.18| Mus musculus chromosome 6, clone RP23-461L9, complete sequence
          Length = 198895

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    aacaaaaaacccttagtaaa 57
             ||||||||||||||||||||
Sbjct: 37569 aacaaaaaacccttagtaaa 37588
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>gb|AC113599.10| Mus musculus chromosome 18, clone RP23-5D23, complete sequence
          Length = 217989

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 70     aaaacaaaaaggcaagcaggggta 93
              |||||||||||| |||||||||||
Sbjct: 168178 aaaacaaaaaggaaagcaggggta 168155
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>gb|AC124237.13| Mus musculus chromosome 17, clone RP23-281A8, complete sequence
          Length = 200410

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    atacaatttgcaaaatacga 157
              ||||||||||||||||||||
Sbjct: 152760 atacaatttgcaaaatacga 152779
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>ref|XM_737478.1| Plasmodium chabaudi chabaudi hypothetical protein (PC302311.00.0)
            partial mRNA
          Length = 1326

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 149  aaaatacgaagctactggaa 168
            ||||||||||||||||||||
Sbjct: 1041 aaaatacgaagctactggaa 1060



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 149 aaaatacgaagctactggaa 168
           ||||||||||||||||||||
Sbjct: 933 aaaatacgaagctactggaa 952



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 149 aaaatacgaagctactggaa 168
           ||||||||||||||||||||
Sbjct: 825 aaaatacgaagctactggaa 844



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 149 aaaatacgaagctactggaa 168
           ||||||||||||||||||||
Sbjct: 663 aaaatacgaagctactggaa 682



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 149 aaaatacgaagctactggaa 168
           ||||||||||||||||||||
Sbjct: 501 aaaatacgaagctactggaa 520
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>gb|AC113010.10| Mus musculus chromosome 18, clone RP23-172F6, complete sequence
          Length = 246921

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 70    aaaacaaaaaggcaagcaggggta 93
             |||||||||||| |||||||||||
Sbjct: 71215 aaaacaaaaaggaaagcaggggta 71192
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>gb|AC095563.7| Rattus norvegicus 9 BAC CH230-7G11 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 237247

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     gcaaaacaaaaaggcaagca 87
              ||||||||||||||||||||
Sbjct: 161972 gcaaaacaaaaaggcaagca 161991
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>emb|AL732372.15| Human DNA sequence from clone RP4-669L17 on chromosome 1 Contains five
             novel genes, two novel pseudogenes and the gene for a
             novel protein similar to the olfactory receptor family,
             complete sequence
          Length = 153649

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    aatagggcaaaacaaaaagg 81
             ||||||||||||||||||||
Sbjct: 96005 aatagggcaaaacaaaaagg 95986
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>emb|AL627309.15| Human DNA sequence from clone RP11-34P13 on chromosome 1 Contains a
             pseudogene similar to part of DEAD/H box polypeptide 11
             (CHL1-like helicase homolog, S. cerevisiae) (DDX11), two
             novel pseudogenes, nine novel genes, two novel proteins
             similar to the olfactory receptor family, a capicua
             homolog (Drosophila) (CIC) pseudogene and two CpG islands,
             complete sequence
          Length = 166904

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aatagggcaaaacaaaaagg 81
             ||||||||||||||||||||
Sbjct: 84660 aatagggcaaaacaaaaagg 84679
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>emb|AL672310.3| Human DNA sequence from clone RP11-226I21 on chromosome 6 Contains
             putative novel gene, complete sequence
          Length = 53890

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    aatagggcaaaacaaaaagg 81
             ||||||||||||||||||||
Sbjct: 41891 aatagggcaaaacaaaaagg 41872
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>emb|AL390765.17| Human DNA sequence from clone RP11-509I1 on chromosome 1 Contains the
            5' end of the GNG4 gene for guanine nucleotide binding (G
            protein) gamma 4 protein, the 3' end of the CHS1 gene for
            Chediak-Higashi syndrome 1 protein and a CpG island,
            complete sequence
          Length = 80101

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 234  gattgcccctttcttcgtgg 253
            ||||||||||||||||||||
Sbjct: 5517 gattgcccctttcttcgtgg 5498
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>gb|AC091561.4| Homo sapiens chromosome 8, clone RP11-388G22, complete sequence
          Length = 191037

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    acaaacaaaaaacccttagt 54
             ||||||||||||||||||||
Sbjct: 38768 acaaacaaaaaacccttagt 38787
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>gb|AC092670.2| Homo sapiens BAC clone RP11-586D5 from 4, complete sequence
          Length = 157951

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 62   aatagggcaaaacaaaaagg 81
            ||||||||||||||||||||
Sbjct: 4496 aatagggcaaaacaaaaagg 4477
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>gb|AC009334.8| Homo sapiens chromosome 1, clone RP11-45L2, complete sequence
          Length = 165618

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 234    gattgcccctttcttcgtgg 253
              ||||||||||||||||||||
Sbjct: 162542 gattgcccctttcttcgtgg 162561
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>gb|AF316500.1|AF316500 Leptospira interrogans strain L170 rfb locus, complete sequence
          Length = 34723

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 19    gataagaattgcaatcacaaacaaaaaa 46
             ||||||||||||||||| ||||| ||||
Sbjct: 10153 gataagaattgcaatcaaaaacataaaa 10126
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>dbj|AK032510.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430575D21 product:hypothetical
            Microbodies C-terminal targeting signal/CUB domain/Low
            density lipoprotein (LDL)-receptor class A (LDLRA) domain
            containing protein, full insert sequence
          Length = 2399

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 70   aaaacaaaaaggcaagcaggggta 93
            |||||||||||| |||||||||||
Sbjct: 2097 aaaacaaaaaggaaagcaggggta 2074
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>dbj|AK043710.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched
            library, clone:A830022O03 product:hypothetical
            Microbodies C-terminal targeting signal/LDL-receptor
            class A (LDLRA) domain profile/CUB domain/Low density
            lipoprotein (LDL)-receptor class A (LDLRA) domain/CUB
            domain profile containing protein, full insert sequence
          Length = 3803

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 70   aaaacaaaaaggcaagcaggggta 93
            |||||||||||| |||||||||||
Sbjct: 2566 aaaacaaaaaggaaagcaggggta 2543
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 185      acgccttctccatcagccgc 204
                ||||||||||||||||||||
Sbjct: 21091482 acgccttctccatcagccgc 21091501
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>gb|AC012005.4|AC012005 Homo sapiens clone RP11-533E23, complete sequence
          Length = 189557

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aatagggcaaaacaaaaagg 81
              ||||||||||||||||||||
Sbjct: 126773 aatagggcaaaacaaaaagg 126754
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>gb|AC136309.9| Homo sapiens chromosome 11, clone RP11-242C5, complete sequence
          Length = 150642

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aatagggcaaaacaaaaagg 81
             ||||||||||||||||||||
Sbjct: 28393 aatagggcaaaacaaaaagg 28412
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>gb|AC006328.5|AC006328 Homo sapiens BAC clone RP11-102O5 from Y, complete sequence
          Length = 177769

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aatagggcaaaacaaaaagg 81
             ||||||||||||||||||||
Sbjct: 13803 aatagggcaaaacaaaaagg 13822
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>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2
               (P1-P2-P3-IR2@) on chromosome Y
          Length = 4538292

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 62      aatagggcaaaacaaaaagg 81
               ||||||||||||||||||||
Sbjct: 3536154 aatagggcaaaacaaaaagg 3536173



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 62      aatagggcaaaacaaaaagg 81
               ||||||||||||||||||||
Sbjct: 2512224 aatagggcaaaacaaaaagg 2512205
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>gb|AC131281.7| Homo sapiens chromosome 8, clone RP11-585F1, complete sequence
          Length = 120139

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    aatagggcaaaacaaaaagg 81
             ||||||||||||||||||||
Sbjct: 97614 aatagggcaaaacaaaaagg 97595
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>gb|AF281920.1|AF281920 Homo sapiens clone 16qtel_c53bt7 sequence
          Length = 485

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 62  aatagggcaaaacaaaaagg 81
           ||||||||||||||||||||
Sbjct: 266 aatagggcaaaacaaaaagg 285
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>gb|AC138033.1| Homo sapiens chromosome 5 clone XXcos-B22C66, complete sequence
          Length = 38954

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aatagggcaaaacaaaaagg 81
             ||||||||||||||||||||
Sbjct: 16751 aatagggcaaaacaaaaagg 16770
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>gb|AC137934.1| Homo sapiens chromosome 16 clone XXcos-yA11c16, complete sequence
          Length = 35141

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    aatagggcaaaacaaaaagg 81
             ||||||||||||||||||||
Sbjct: 18550 aatagggcaaaacaaaaagg 18531
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>gb|AC114498.2| Homo sapiens chromosome 1 clone RP5-857K21, complete sequence
          Length = 121664

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aatagggcaaaacaaaaagg 81
             ||||||||||||||||||||
Sbjct: 55375 aatagggcaaaacaaaaagg 55394
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>gb|AC130223.2| Homo sapiens cosmid clone XXcos-2003C17 from 2, complete sequence
          Length = 16515

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    aatagggcaaaacaaaaagg 81
             ||||||||||||||||||||
Sbjct: 12598 aatagggcaaaacaaaaagg 12579
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>gb|AC134873.2| Homo sapiens cosmid clone XXcos-2003C15 from 2, complete sequence
          Length = 36966

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 62  aatagggcaaaacaaaaagg 81
           ||||||||||||||||||||
Sbjct: 898 aatagggcaaaacaaaaagg 917
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>dbj|AP005810.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0696F12
          Length = 165227

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   acgccttctccatcagccgc 204
             ||||||||||||||||||||
Sbjct: 12843 acgccttctccatcagccgc 12862
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>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1058_A12
          Length = 152269

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    acgccttctccatcagccgc 204
              ||||||||||||||||||||
Sbjct: 134781 acgccttctccatcagccgc 134800
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>emb|BX649379.10| Human DNA sequence from clone RP5-1040D10 on chromosome 1, complete
             sequence
          Length = 93321

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    aatagggcaaaacaaaaagg 81
             ||||||||||||||||||||
Sbjct: 38056 aatagggcaaaacaaaaagg 38037
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>emb|AJ487038.1|CAR487038 Cicer arietinum partial mRNA for fructokinase-like protein, clone
           CanPFKB
          Length = 972

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 259 attgctccacatgcgttggcaaatttga 286
           |||||||||||||| || ||||||||||
Sbjct: 642 attgctccacatgcatttgcaaatttga 615
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>gb|AC137743.3| Mus musculus BAC clone RP24-469M15 from 6, complete sequence
          Length = 170200

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    aacaaaaaacccttagtaaa 57
             ||||||||||||||||||||
Sbjct: 23883 aacaaaaaacccttagtaaa 23864
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>dbj|AP006222.1| Homo sapiens genomic DNA, chromosome Un, clone:CMC-68E4, telomere
             region, complete sequence
          Length = 40302

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aatagggcaaaacaaaaagg 81
             ||||||||||||||||||||
Sbjct: 14091 aatagggcaaaacaaaaagg 14110
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>emb|AL844530.7| Mouse DNA sequence from clone RP23-248L2 on chromosome 2, complete
             sequence
          Length = 169779

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 68    gcaaaacaaaaaggcaagcagggg 91
             |||||||| |||||||||||||||
Sbjct: 77709 gcaaaacagaaaggcaagcagggg 77732
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>emb|AL136038.5|CNS01DVT Human chromosome 14 DNA sequence BAC C-2302E22 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 151930

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     gaaatagggcaaaacaaaaa 79
              ||||||||||||||||||||
Sbjct: 129342 gaaatagggcaaaacaaaaa 129323


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,723,055
Number of Sequences: 3902068
Number of extensions: 4723055
Number of successful extensions: 118803
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118612
Number of HSP's gapped (non-prelim): 191
length of query: 378
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 356
effective length of database: 17,147,199,772
effective search space: 6104403118832
effective search space used: 6104403118832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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