>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 157/192 (81%), Gaps = 2/192 (1%)
 Strand = Plus / Plus

                                                                           
Query: 222     aacatgtctgcggaacaaattattggccatagcttcacaaaaaataaccaaagaatccga 281
               |||| ||||||||||||||||||||||||| ||||  ||||| |  |||||||||| |||
Sbjct: 5316807 aacaggtctgcggaacaaattattggccattgctttgcaaaaca--accaaagaattcga 5316864

                                                                           
Query: 282     tgttcaaccaccatcatccacgtatgatctcatcagggcttgagcacaagtgacagccca 341
                 || |||  |||||| ||||  | ||| | |||||||| ||||  |||| |  || |||
Sbjct: 5316865 aatttaacagccatcaaccacagacgatgttatcagggcctgagtgcaagcgctagacca 5316924

                                                                           
Query: 342     aacttgggtgctctgtccaaggccttggtgtcgaattcaccggatatcgtcaagagtgac 401
               |||||||| | |||||||||||||||||||||||||||||| || || ||||| |  |||
Sbjct: 5316925 aacttggggggtctgtccaaggccttggtgtcgaattcaccagagattgtcaaaaccgac 5316984

                           
Query: 402     tttggtttaacc 413
               || |||||||||
Sbjct: 5316985 ttgggtttaacc 5316996

>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0009J13, from chromosome 3, complete sequence
          Length = 147205

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 157/192 (81%), Gaps = 2/192 (1%)
 Strand = Plus / Plus

                                                                         
Query: 222   aacatgtctgcggaacaaattattggccatagcttcacaaaaaataaccaaagaatccga 281
             |||| ||||||||||||||||||||||||| ||||  ||||| |  |||||||||| |||
Sbjct: 22975 aacaggtctgcggaacaaattattggccattgctttgcaaaaca--accaaagaattcga 23032

                                                                         
Query: 282   tgttcaaccaccatcatccacgtatgatctcatcagggcttgagcacaagtgacagccca 341
               || |||  |||||| ||||  | ||| | |||||||| ||||  |||| |  || |||
Sbjct: 23033 aatttaacagccatcaaccacagacgatgttatcagggcctgagtgcaagcgctagacca 23092

                                                                         
Query: 342   aacttgggtgctctgtccaaggccttggtgtcgaattcaccggatatcgtcaagagtgac 401
             |||||||| | |||||||||||||||||||||||||||||| || || ||||| |  |||
Sbjct: 23093 aacttggggggtctgtccaaggccttggtgtcgaattcaccagagattgtcaaaaccgac 23152

                         
Query: 402   tttggtttaacc 413
             || |||||||||
Sbjct: 23153 ttgggtttaacc 23164

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 157/192 (81%), Gaps = 2/192 (1%)
 Strand = Plus / Plus

                                                                           
Query: 222     aacatgtctgcggaacaaattattggccatagcttcacaaaaaataaccaaagaatccga 281
               |||| ||||||||||||||||||||||||| ||||  ||||| |  |||||||||| |||
Sbjct: 5316022 aacaggtctgcggaacaaattattggccattgctttgcaaaaca--accaaagaattcga 5316079

                                                                           
Query: 282     tgttcaaccaccatcatccacgtatgatctcatcagggcttgagcacaagtgacagccca 341
                 || |||  |||||| ||||  | ||| | |||||||| ||||  |||| |  || |||
Sbjct: 5316080 aatttaacagccatcaaccacagacgatgttatcagggcctgagtgcaagcgctagacca 5316139

                                                                           
Query: 342     aacttgggtgctctgtccaaggccttggtgtcgaattcaccggatatcgtcaagagtgac 401
               |||||||| | |||||||||||||||||||||||||||||| || || ||||| |  |||
Sbjct: 5316140 aacttggggggtctgtccaaggccttggtgtcgaattcaccagagattgtcaaaaccgac 5316199

                           
Query: 402     tttggtttaacc 413
               || |||||||||
Sbjct: 5316200 ttgggtttaacc 5316211

>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0006P09, complete sequence
          Length = 153950

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 157/192 (81%), Gaps = 2/192 (1%)
 Strand = Plus / Plus

                                                                         
Query: 222   aacatgtctgcggaacaaattattggccatagcttcacaaaaaataaccaaagaatccga 281
             |||| ||||||||||||||||||||||||| ||||  ||||| |  |||||||||| |||
Sbjct: 37956 aacaggtctgcggaacaaattattggccattgctttgcaaaaca--accaaagaattcga 38013

                                                                         
Query: 282   tgttcaaccaccatcatccacgtatgatctcatcagggcttgagcacaagtgacagccca 341
               || |||  |||||| ||||  | ||| | |||||||| ||||  |||| |  || |||
Sbjct: 38014 aatttaacagccatcaaccacagacgatgttatcagggcctgagtgcaagcgctagacca 38073

                                                                         
Query: 342   aacttgggtgctctgtccaaggccttggtgtcgaattcaccggatatcgtcaagagtgac 401
             |||||||| | |||||||||||||||||||||||||||||| || || ||||| |  |||
Sbjct: 38074 aacttggggggtctgtccaaggccttggtgtcgaattcaccagagattgtcaaaaccgac 38133

                         
Query: 402   tttggtttaacc 413
             || |||||||||
Sbjct: 38134 ttgggtttaacc 38145

>dbj|AK121020.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049E21, full
            insert sequence
          Length = 1265

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 157/192 (81%), Gaps = 2/192 (1%)
 Strand = Plus / Minus

                                                                        
Query: 222  aacatgtctgcggaacaaattattggccatagcttcacaaaaaataaccaaagaatccga 281
            |||| ||||||||||||||||||||||||| ||||  ||||| |  |||||||||| |||
Sbjct: 1052 aacaggtctgcggaacaaattattggccattgctttgcaaaaca--accaaagaattcga 995

                                                                        
Query: 282  tgttcaaccaccatcatccacgtatgatctcatcagggcttgagcacaagtgacagccca 341
              || |||  |||||| ||||  | ||| | |||||||| ||||  |||| |  || |||
Sbjct: 994  aatttaacagccatcaaccacagacgatgttatcagggcctgagtgcaagcgctagacca 935

                                                                        
Query: 342  aacttgggtgctctgtccaaggccttggtgtcgaattcaccggatatcgtcaagagtgac 401
            |||||||| | |||||||||||||||||||||||||||||| || || ||||| |  |||
Sbjct: 934  aacttggggggtctgtccaaggccttggtgtcgaattcaccagagattgtcaaaaccgac 875

                        
Query: 402  tttggtttaacc 413
            || |||||||||
Sbjct: 874  ttgggtttaacc 863

>gb|AY823551.1| Pennisetum glaucum voltage dependent anion channel protein mRNA,
           complete cds
          Length = 1025

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                       
Query: 305 atgatctcatcagggcttgagcacaagtgacagcccaaacttgggtgctctgtccaaggc 364
           |||||||  ||||||||| ||| | |||| ||| ||||||||||| || ||||||| |||
Sbjct: 843 atgatctggtcagggcttcagcgcgagtgccaggccaaacttgggggccctgtccagggc 784

                                                          
Query: 365 cttggtgtcgaattcaccggatatcgtcaagagtgactttggtttaa 411
           |||||||||||| ||||| || || |||||||| ||||| |||||||
Sbjct: 783 cttggtgtcgaactcacccgagattgtcaagagcgacttgggtttaa 737

>gb|AY823552.1| Pennisetum glaucum voltage dependent anion channel protein gene,
            complete cds
          Length = 2967

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 84/98 (85%)
 Strand = Plus / Minus

                                                                        
Query: 314  tcagggcttgagcacaagtgacagcccaaacttgggtgctctgtccaaggccttggtgtc 373
            ||||||||| ||| | |||| ||| ||||||||||| || ||||||| ||||||||||||
Sbjct: 2967 tcagggcttcagcgcgagtgccaggccaaacttgggggccctgtccagggccttggtgtc 2908

                                                  
Query: 374  gaattcaccggatatcgtcaagagtgactttggtttaa 411
            ||| ||||| || || |||||||| ||||| |||||||
Sbjct: 2907 gaactcacccgagattgtcaagagcgacttgggtttaa 2870

>gb|AF513381.1| Pennisetum glaucum PgPOR29 (PORIN) mRNA, complete cds; nuclear gene
           for mitochondrial product
          Length = 831

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                       
Query: 317 gggcttgagcacaagtgacagcccaaacttgggtgctctgtccaaggccttggtgtcgaa 376
           |||||| ||| | |||| ||| ||||||||||| || ||||||| |||||||||||||||
Sbjct: 831 gggcttcagcgcgagtgccaggccaaacttgggggccctgtccagggccttggtgtcgaa 772

                                              
Query: 377 ttcaccggatatcgtcaagagtgactttggtttaa 411
            ||||| || || |||||||| ||||| |||||||
Sbjct: 771 ctcacccgagattgtcaagagcgacttgggtttaa 737

>gb|AY224468.1| Oryza sativa (japonica cultivar-group) isolate 24162 porin-like
           protein mRNA, complete cds
          Length = 834

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                       
Query: 339 ccaaacttgggtgctctgtccaaggccttggtgtcgaattcaccggatatcgtcaagagt 398
           ||||||||||| | |||||||||||||||||||||||||||||| || || ||||| |  
Sbjct: 809 ccaaacttggggggtctgtccaaggccttggtgtcgaattcaccagagattgtcaaaacc 750

                          
Query: 399 gactttggtttaacc 413
           ||||| |||||||||
Sbjct: 749 gacttgggtttaacc 735

>gb|AY105200.1| Zea mays PCO141157 mRNA sequence
          Length = 1411

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 88/106 (83%)
 Strand = Plus / Minus

                                                                        
Query: 306  tgatctcatcagggcttgagcacaagtgacagcccaaacttgggtgctctgtccaaggcc 365
            |||||| |||||||||| ||  |||| | ||  |||||||| || | |||||||| ||||
Sbjct: 1083 tgatctgatcagggcttcagtgcaagcgccaagccaaactttggggatctgtccagggcc 1024

                                                          
Query: 366  ttggtgtcgaattcaccggatatcgtcaagagtgactttggtttaa 411
            || |||||||||||||| || || |||||||| ||||| |||||||
Sbjct: 1023 tttgtgtcgaattcaccagagattgtcaagagcgacttgggtttaa 978

>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 171     ggcctatcggatcctgccca 190
               ||||||||||||||||||||
Sbjct: 2184527 ggcctatcggatcctgccca 2184546

>gb|AC149071.3| Xenopus tropicalis BAC clone ISB10250N9 containing the Irx4 gene,
            complete cds, complete sequence
          Length = 84437

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 249  catagcttcacaaaaaataa 268
            ||||||||||||||||||||
Sbjct: 7132 catagcttcacaaaaaataa 7151

>gb|AC140336.2| Mus musculus BAC clone RP24-266F17 from chromosome 18, complete
             sequence
          Length = 186205

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 82    ctactcggaactcacagtagaaag 105
             |||||| |||||||||||||||||
Sbjct: 53712 ctactctgaactcacagtagaaag 53689

>gb|AC144794.2| Mus musculus BAC clone RP24-463B6 from chromosome 18, complete sequence
          Length = 152588

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   tggataaaatcccaggtgaa 170
             ||||||||||||||||||||
Sbjct: 13293 tggataaaatcccaggtgaa 13274

>gb|AC123950.3| Mus musculus BAC clone RP23-162I9 from chromosome 18, complete sequence
          Length = 181095

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   tggataaaatcccaggtgaa 170
             ||||||||||||||||||||
Sbjct: 38654 tggataaaatcccaggtgaa 38673

>ref|XM_387571.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07395.1)
            partial mRNA
          Length = 1422

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 382  cggatatcgtcaagagtgac 401
            ||||||||||||||||||||
Sbjct: 1019 cggatatcgtcaagagtgac 1000

>ref|XM_383886.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03710.1)
            partial mRNA
          Length = 1353

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 240  attattggccatagcttcac 259
            ||||||||||||||||||||
Sbjct: 1272 attattggccatagcttcac 1253

>gb|AC124444.4| Mus musculus BAC clone RP24-185P7 from chromosome 7, complete sequence
          Length = 184996

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    gctctgtccaaggccttggt 370
              ||||||||||||||||||||
Sbjct: 140676 gctctgtccaaggccttggt 140695

>gb|AC107024.5| Homo sapiens 3 BAC RP11-447J13 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 180216

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 237  caaattattggccatagctt 256
            ||||||||||||||||||||
Sbjct: 6786 caaattattggccatagctt 6805

>gb|AC122912.2| Mus musculus BAC clone RP23-61E5 from 7, complete sequence
          Length = 255062

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    gctctgtccaaggccttggt 370
              ||||||||||||||||||||
Sbjct: 212000 gctctgtccaaggccttggt 211981

>ref|XM_649330.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (54.t00042)
            partial mRNA
          Length = 4962

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 42   atcaaatgtagcttcttcaa 61
            ||||||||||||||||||||
Sbjct: 1257 atcaaatgtagcttcttcaa 1238

>gb|AY337211.1| Uncultured sulfate-reducing bacterium clone W307173 dissimilatory
            sulfite reductase subunits alpha and beta (dsrAB) gene,
            partial sequence
          Length = 1373

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 387  atcgtcaagagtgactttgg 406
            ||||||||||||||||||||
Sbjct: 1320 atcgtcaagagtgactttgg 1301

>gb|AC109280.9| Mus musculus chromosome 18, clone RP23-400B7, complete sequence
          Length = 213683

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 82     ctactcggaactcacagtagaaag 105
              |||||| |||||||||||||||||
Sbjct: 146091 ctactctgaactcacagtagaaag 146068

>gb|AC163105.5| Mus musculus BAC clone RP23-259A11 from chromosome 14, complete sequence
          Length = 227806

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 390    gtcaagagtgactttggttt 409
              ||||||||||||||||||||
Sbjct: 193928 gtcaagagtgactttggttt 193909

>emb|BX004823.23| Zebrafish DNA sequence from clone DKEY-13A3 in linkage group 14, complete
              sequence
          Length = 197683

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 340    caaacttgggtgctctgtcc 359
              ||||||||||||||||||||
Sbjct: 127167 caaacttgggtgctctgtcc 127148

>ref|NG_005518.1| Homo sapiens zinc finger protein 705C pseudogene (ZNF705CP) on
             chromosome 8
          Length = 26370

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    aactcacagtagaaagaaac 109
             ||||||||||||||||||||
Sbjct: 23417 aactcacagtagaaagaaac 23436

>gb|AC092532.17| Papio anubis clone rp41-110d13, complete sequence
          Length = 157944

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    ccgcatgaaaatcaaatgta 51
             ||||||||||||||||||||
Sbjct: 20995 ccgcatgaaaatcaaatgta 20976

>dbj|AK137841.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A130024G16 product:demethyl-Q 7, full
            insert sequence
          Length = 3071

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  gctctgtccaaggccttggt 370
            ||||||||||||||||||||
Sbjct: 1265 gctctgtccaaggccttggt 1284

>gb|AC087203.12| Homo sapiens chromosome 8, clone RP11-351I21, complete sequence
          Length = 117500

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    aactcacagtagaaagaaac 109
             ||||||||||||||||||||
Sbjct: 27423 aactcacagtagaaagaaac 27442

>gb|AC018554.7| Homo sapiens chromosome 16 clone RP11-457D20, complete sequence
          Length = 216977

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   atttaacagaacatgtctgc 232
             ||||||||||||||||||||
Sbjct: 73587 atttaacagaacatgtctgc 73568

>emb|CR318631.5| Zebrafish DNA sequence from clone DKEY-207D5 in linkage group 18,
             complete sequence
          Length = 189711

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 90    aactcacagtagaaagaaacaagc 113
             ||||||||||||||| ||||||||
Sbjct: 55629 aactcacagtagaaaaaaacaagc 55606

>emb|BX649507.3| Zebrafish DNA sequence from clone CH211-154H20 in linkage group 18,
             complete sequence
          Length = 166185

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 90    aactcacagtagaaagaaacaagc 113
             ||||||||||||||| ||||||||
Sbjct: 97948 aactcacagtagaaaaaaacaagc 97971

>emb|BX000347.7| Zebrafish DNA sequence from clone DKEY-66C4 in linkage group 18, complete
              sequence
          Length = 155713

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 90     aactcacagtagaaagaaacaagc 113
              ||||||||||||||| ||||||||
Sbjct: 109376 aactcacagtagaaaaaaacaagc 109399

>gb|AC005670.1|AC005670 Homo sapiens chromosome 17, clone hRPK.63_A_1, complete sequence
          Length = 147902

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   atagcttcacaaaaaataac 269
             ||||||||||||||||||||
Sbjct: 58090 atagcttcacaaaaaataac 58071

>gb|AC156797.2| Mus musculus BAC clone RP24-88A16 from chromosome 14, complete sequence
          Length = 166341

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 390    gtcaagagtgactttggttt 409
              ||||||||||||||||||||
Sbjct: 152100 gtcaagagtgactttggttt 152119

>dbj|AP004489.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT04I02, TM0021,
             complete sequence
          Length = 83700

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    tagcggtaaaatcaatcaac 30
             ||||||||||||||||||||
Sbjct: 16750 tagcggtaaaatcaatcaac 16769


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,842,849
Number of Sequences: 3902068
Number of extensions: 3842849
Number of successful extensions: 71124
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71028
Number of HSP's gapped (non-prelim): 96
length of query: 413
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 391
effective length of database: 17,147,199,772
effective search space: 6704555110852
effective search space used: 6704555110852
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)