ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet32f11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105447.1| Zea mays PCO139673 mRNA sequence 96 1e-16
2dbj|AK100508.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
4dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
5gb|AY111372.1| Zea mays CL11075_2 mRNA sequence 78 2e-11
6ref|XM_397264.2| PREDICTED: Apis mellifera similar to ENSANGP000... 46 0.082
7ref|NM_016099.2| Homo sapiens golgi autoantigen, golgin subfamil... 44 0.32
8ref|NM_001002296.1| Homo sapiens golgi autoantigen, golgin subfa... 44 0.32
9gb|BC001227.2| Homo sapiens golgi autoantigen, golgin subfamily ... 44 0.32
10ref|XM_844157.1| PREDICTED: Canis familiaris similar to golgi au... 44 0.32
11emb|CR617602.1| full-length cDNA clone CS0DA001YL17 of Neuroblas... 44 0.32
12emb|CR616191.1| full-length cDNA clone CS0DA002YE22 of Neuroblas... 44 0.32
13emb|CR609818.1| full-length cDNA clone CS0DI064YA01 of Placenta ... 44 0.32
14emb|CR606993.1| full-length cDNA clone CS0DI001YL07 of Placenta ... 44 0.32
15emb|CR596558.1| full-length cDNA clone CS0DI026YE24 of Placenta ... 44 0.32
16gb|AC009630.14| Homo sapiens chromosome 8, clone RP11-360L9, com... 44 0.32
17gb|AF125102.1|AF125102 Homo sapiens HSPC041 protein mRNA, comple... 44 0.32
18dbj|AB104615.1| Homo sapiens gcp16 mRNA for Golgi complex-associ... 44 0.32
19dbj|AK026613.1| Homo sapiens cDNA: FLJ22960 fis, clone KAT10193,... 44 0.32
20emb|AL109760.3|HSJ513G18 Human DNA sequence from clone RP3-513G1... 42 1.3
21emb|BX248505.8| Zebrafish DNA sequence from clone CH211-87L2 in ... 42 1.3
22emb|BX255919.15| Zebrafish DNA sequence from clone DKEY-259P11 i... 42 1.3
23ref|NM_001035484.1| Bos taurus golgi autoantigen, golgin subfami... 40 5.1
24gb|AC157593.4| Mus musculus BAC clone RP23-254B18 from chromosom... 40 5.1
25gb|AC146605.3| Mus musculus BAC clone RP23-304J7 from chromosome... 40 5.1
26gb|BT013813.1| Lycopersicon esculentum clone 132734F, mRNA sequence 40 5.1
27emb|BX927308.14| Zebrafish DNA sequence from clone DKEY-16M19 in... 40 5.1
28gb|AC102083.12| Mus musculus chromosome 16, clone RP23-269L18, c... 40 5.1
29gb|AF029308.1|HTCRBCHR9 Homo sapiens chromosome 9 duplication of... 40 5.1
30emb|CR387978.12| Zebrafish DNA sequence from clone DKEY-33M5 in ... 40 5.1
31gb|AC122056.4| Mus musculus BAC clone RP24-466A3 from chromosome... 40 5.1
32emb|CR847570.9| Zebrafish DNA sequence from clone DKEY-29M9 in l... 40 5.1
33emb|CR381531.7| Zebrafish DNA sequence from clone DKEY-190G6 in ... 40 5.1
34emb|AL356489.14| Human DNA sequence from clone RP11-384P7 on chr... 40 5.1
35emb|CR381641.12| Zebrafish DNA sequence from clone DKEY-189N10 i... 40 5.1
36emb|X64098.1|VCTCP V.cholerae tcp gene cluster for biosynthesis ... 40 5.1
37emb|AL356785.18| Human DNA sequence from clone RP13-206I21 on ch... 40 5.1
38emb|AL132793.24|HSDJ324B8 Human DNA sequence from clone RP3-324B... 40 5.1
39emb|BX769175.12| Zebrafish DNA sequence from clone DKEY-229K5 in... 40 5.1
40emb|X83524.1|NTGLUTLIG N.tabacum mRNA for L-Glutamate:tRNA-Glu l... 40 5.1
41emb|X74730.1|VCTCPHPAB V.cholerae tcpH, tcpP, tcpA,tcpB, tcpQ, t... 40 5.1
42emb|AL929272.10| Mouse DNA sequence from clone RP23-69H10 on chr... 40 5.1
43emb|BX470266.10| Zebrafish DNA sequence from clone DKEYP-9D4 in ... 40 5.1
44ref|NG_001337.1| Homo sapiens T cell receptor beta variable orph... 40 5.1
45gb|AC007784.7| Homo sapiens 12p13 BAC RPCI11-1092P21 (Roswell Pa... 40 5.1
46emb|BX323042.7| Zebrafish DNA sequence from clone DKEYP-78G2 in ... 40 5.1
47ref|NM_073859.3| Caenorhabditis elegans W07G4.4 (W07G4.4) mRNA, ... 40 5.1
48dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
49gb|DQ000309.1| Nicotiana benthamiana glutamyl-tRNA synthetase (G... 40 5.1
50dbj|AP002805.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
51dbj|AP000616.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
52gb|AC002485.1|AC002485 Human PAC clone CTA-212D3, complete sequence 40 5.1
53emb|Z78018.1|CEW07G4 Caenorhabditis elegans Cosmid W07G4, comple... 40 5.1
54gb|AC140288.5| Mus musculus BAC clone RP23-348K1 from 14, comple... 40 5.1
55emb|AL773558.14| Zebrafish DNA sequence from clone CH211-207M11 ... 40 5.1
56emb|BX005280.14| Zebrafish DNA sequence from clone CH211-256J23 ... 40 5.1
57gb|BT020714.1| Bos taurus golgi autoantigen, golgin subfamily a,... 40 5.1
58gb|AC171726.1| Lycopersicon esculentum chromosome 01 clone C01HB... 40 5.1 
>gb|AY105447.1| Zea mays PCO139673 mRNA sequence
          Length = 1259

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 57/60 (95%)
 Strand = Plus / Minus

                                                                        
Query: 309  ttcgaagtcctccaagtactctctgctgttgagctctgtcaacctgctaatcgtacgatc 368
            ||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1087 ttcgaagtcctccaaatattctctgctgttgatctctgtcaacctgctaatcgtacgatc 1028
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>dbj|AK100508.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099M05, full
            insert sequence
          Length = 3645

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 80/91 (87%), Gaps = 1/91 (1%)
 Strand = Plus / Minus

                                                                        
Query: 291  gggctgttgccattttgcttcgaagtcctccaagtactctctgctgttgagctctgtcaa 350
            ||||||| || |||| ||||| |||||||||||||||||||| ||||||| |||||||||
Sbjct: 3317 gggctgtcgcaatttcgcttcaaagtcctccaagtactctctactgttgatctctgtcaa 3258

                                           
Query: 351  cctgctaatcgtacgat-cttggcgaatcct 380
            ||| ||||| || |||| |||||| ||||||
Sbjct: 3257 cctactaattgttcgatccttggcaaatcct 3227
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                            
Query: 291      gggctgttgccattttgcttcgaagtcctccaagtactctctgctgttgagctctgtcaa 350
                ||||||| || |||| ||||| |||||||||||||||||||| ||||||| |||||||||
Sbjct: 10097284 gggctgtcgcaatttcgcttcaaagtcctccaagtactctctactgttgatctctgtcaa 10097225

                     
Query: 351      cctgc 355
                |||||
Sbjct: 10097224 cctgc 10097220
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>dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0023I13
          Length = 165911

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                         
Query: 291   gggctgttgccattttgcttcgaagtcctccaagtactctctgctgttgagctctgtcaa 350
             ||||||| || |||| ||||| |||||||||||||||||||| ||||||| |||||||||
Sbjct: 56630 gggctgtcgcaatttcgcttcaaagtcctccaagtactctctactgttgatctctgtcaa 56571

                  
Query: 351   cctgc 355
             |||||
Sbjct: 56570 cctgc 56566
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>gb|AY111372.1| Zea mays CL11075_2 mRNA sequence
          Length = 722

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/62 (91%), Gaps = 2/62 (3%)
 Strand = Plus / Plus

                                                                       
Query: 309 ttcgaagtcctccaagtactctctgctgttg--agctctgtcaacctgctaatcgtacga 366
           ||||||||||||||| || ||||||||||||  | |||||||||||||||||||||||||
Sbjct: 416 ttcgaagtcctccaaatattctctgctgttggaatctctgtcaacctgctaatcgtacga 475

             
Query: 367 tc 368
           ||
Sbjct: 476 tc 477
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>ref|XM_397264.2| PREDICTED: Apis mellifera similar to ENSANGP00000022722 (LOC413825),
            mRNA
          Length = 1959

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 74   caagtgtgacattttttgcagatttac 100
            ||||||||||||||| |||||||||||
Sbjct: 1300 caagtgtgacattttctgcagatttac 1274
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>ref|NM_016099.2| Homo sapiens golgi autoantigen, golgin subfamily a, 7 (GOLGA7),
            transcript variant 1, mRNA
          Length = 1919

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 199  atatttataacaaaactataat 220
            ||||||||||||||||||||||
Sbjct: 1362 atatttataacaaaactataat 1341
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>ref|NM_001002296.1| Homo sapiens golgi autoantigen, golgin subfamily a, 7 (GOLGA7),
            transcript variant 2, mRNA
          Length = 2042

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 199  atatttataacaaaactataat 220
            ||||||||||||||||||||||
Sbjct: 1485 atatttataacaaaactataat 1464
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>gb|BC001227.2| Homo sapiens golgi autoantigen, golgin subfamily a, 7, mRNA (cDNA
            clone MGC:4876 IMAGE:3456384), complete cds
          Length = 1904

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 199  atatttataacaaaactataat 220
            ||||||||||||||||||||||
Sbjct: 1347 atatttataacaaaactataat 1326
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>ref|XM_844157.1| PREDICTED: Canis familiaris similar to golgi autoantigen, golgin
            subfamily a, 7 (LOC607476), mRNA
          Length = 1494

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 199  atatttataacaaaactataat 220
            ||||||||||||||||||||||
Sbjct: 1375 atatttataacaaaactataat 1354
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>emb|CR617602.1| full-length cDNA clone CS0DA001YL17 of Neuroblastoma of Homo sapiens
            (human)
          Length = 1850

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 199  atatttataacaaaactataat 220
            ||||||||||||||||||||||
Sbjct: 1332 atatttataacaaaactataat 1311
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>emb|CR616191.1| full-length cDNA clone CS0DA002YE22 of Neuroblastoma of Homo sapiens
            (human)
          Length = 1911

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 199  atatttataacaaaactataat 220
            ||||||||||||||||||||||
Sbjct: 1389 atatttataacaaaactataat 1368
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>emb|CR609818.1| full-length cDNA clone CS0DI064YA01 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1863

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 199  atatttataacaaaactataat 220
            ||||||||||||||||||||||
Sbjct: 1358 atatttataacaaaactataat 1337
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>emb|CR606993.1| full-length cDNA clone CS0DI001YL07 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1822

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 199  atatttataacaaaactataat 220
            ||||||||||||||||||||||
Sbjct: 1310 atatttataacaaaactataat 1289
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>emb|CR596558.1| full-length cDNA clone CS0DI026YE24 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1821

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 199  atatttataacaaaactataat 220
            ||||||||||||||||||||||
Sbjct: 1310 atatttataacaaaactataat 1289
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>gb|AC009630.14| Homo sapiens chromosome 8, clone RP11-360L9, complete sequence
          Length = 219622

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 199    atatttataacaaaactataat 220
              ||||||||||||||||||||||
Sbjct: 138187 atatttataacaaaactataat 138208
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>gb|AF125102.1|AF125102 Homo sapiens HSPC041 protein mRNA, complete cds
          Length = 1898

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 199  atatttataacaaaactataat 220
            ||||||||||||||||||||||
Sbjct: 1326 atatttataacaaaactataat 1305
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>dbj|AB104615.1| Homo sapiens gcp16 mRNA for Golgi complex-associated protein of
            16kDa, complete cds
          Length = 1949

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 199  atatttataacaaaactataat 220
            ||||||||||||||||||||||
Sbjct: 1342 atatttataacaaaactataat 1321
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>dbj|AK026613.1| Homo sapiens cDNA: FLJ22960 fis, clone KAT10193, highly similar to
            AF125102 Homo sapiens HSPC041 protein mRNA
          Length = 1954

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 199  atatttataacaaaactataat 220
            ||||||||||||||||||||||
Sbjct: 1347 atatttataacaaaactataat 1326
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>emb|AL109760.3|HSJ513G18 Human DNA sequence from clone RP3-513G18 on chromosome 4, complete
             sequence
          Length = 112560

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 285   gtgcaggggctgttgccattt 305
             |||||||||||||||||||||
Sbjct: 89404 gtgcaggggctgttgccattt 89424
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>emb|BX248505.8| Zebrafish DNA sequence from clone CH211-87L2 in linkage group 14,
              complete sequence
          Length = 189425

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 199    atatttataacaaaactataa 219
              |||||||||||||||||||||
Sbjct: 116869 atatttataacaaaactataa 116889
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>emb|BX255919.15| Zebrafish DNA sequence from clone DKEY-259P11 in linkage group 8,
             complete sequence
          Length = 168607

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 199   atatttataacaaaactataa 219
             |||||||||||||||||||||
Sbjct: 80610 atatttataacaaaactataa 80630
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>ref|NM_001035484.1| Bos taurus golgi autoantigen, golgin subfamily a, 7 (GOLGA7), mRNA
          Length = 1836

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 201  atttataacaaaactataat 220
            ||||||||||||||||||||
Sbjct: 1290 atttataacaaaactataat 1271
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>gb|AC157593.4| Mus musculus BAC clone RP23-254B18 from chromosome 16, complete
             sequence
          Length = 204167

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   taatatttataacaaaacta 216
             ||||||||||||||||||||
Sbjct: 90951 taatatttataacaaaacta 90970
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>gb|AC146605.3| Mus musculus BAC clone RP23-304J7 from chromosome 14, complete sequence
          Length = 225868

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   aaaccaacatttctcccatt 176
             ||||||||||||||||||||
Sbjct: 27721 aaaccaacatttctcccatt 27740
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>gb|BT013813.1| Lycopersicon esculentum clone 132734F, mRNA sequence
          Length = 2167

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 19   agtttcatataaaggataggatag 42
            |||||||||||||||||| |||||
Sbjct: 1425 agtttcatataaaggataagatag 1402
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>emb|BX927308.14| Zebrafish DNA sequence from clone DKEY-16M19 in linkage group 22,
             complete sequence
          Length = 220546

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    tgacattttttgcagattta 99
             ||||||||||||||||||||
Sbjct: 13386 tgacattttttgcagattta 13367
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>gb|AC102083.12| Mus musculus chromosome 16, clone RP23-269L18, complete sequence
          Length = 205875

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    taatatttataacaaaacta 216
              ||||||||||||||||||||
Sbjct: 197319 taatatttataacaaaacta 197300
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>gb|AF029308.1|HTCRBCHR9 Homo sapiens chromosome 9 duplication of the T cell receptor beta locus
             and trypsinogen gene families
          Length = 216293

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 196   ttaatatttataacaaaact 215
             ||||||||||||||||||||
Sbjct: 78990 ttaatatttataacaaaact 79009
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>emb|CR387978.12| Zebrafish DNA sequence from clone DKEY-33M5 in linkage group 1, complete
              sequence
          Length = 208746

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    taatatttataacaaaacta 216
              ||||||||||||||||||||
Sbjct: 197485 taatatttataacaaaacta 197466
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>gb|AC122056.4| Mus musculus BAC clone RP24-466A3 from chromosome 14, complete sequence
          Length = 179685

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    aaaccaacatttctcccatt 176
              ||||||||||||||||||||
Sbjct: 137226 aaaccaacatttctcccatt 137207
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>emb|CR847570.9| Zebrafish DNA sequence from clone DKEY-29M9 in linkage group 3,
             complete sequence
          Length = 124104

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    tgacattttttgcagattta 99
             ||||||||||||||||||||
Sbjct: 59442 tgacattttttgcagattta 59423
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>emb|CR381531.7| Zebrafish DNA sequence from clone DKEY-190G6 in linkage group 23,
             complete sequence
          Length = 149672

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   tatttataacaaaactataa 219
             ||||||||||||||||||||
Sbjct: 82910 tatttataacaaaactataa 82891
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>emb|AL356489.14| Human DNA sequence from clone RP11-384P7 on chromosome 9 Contains the
             TRBV25OR9-2 gene for T cell receptor beta variable
             25/OR9-2, the PTENP1 gene for phosphatase and tensin
             homolog (mutated in multiple advanced cancers 1)
             pseudogene 1 (PTH2, PTEN2, PSIPTEN), a T-cell receptor
             beta chain V region protein pseudogene, two novel genes,
             the 5' end of the PRSS3 gene for serine protease 3
             (mesotrypsin) and two CpG islands, complete sequence
          Length = 130639

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 196   ttaatatttataacaaaact 215
             ||||||||||||||||||||
Sbjct: 30343 ttaatatttataacaaaact 30362
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>emb|CR381641.12| Zebrafish DNA sequence from clone DKEY-189N10 in linkage group 7,
              complete sequence
          Length = 168455

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     tgacattttttgcagattta 99
              ||||||||||||||||||||
Sbjct: 124334 tgacattttttgcagattta 124353
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>emb|X64098.1|VCTCP V.cholerae tcp gene cluster for biosynthesis of the TCP pilus
          Length = 13824

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 149  tgacaggaaaaccaacattt 168
            ||||||||||||||||||||
Sbjct: 2769 tgacaggaaaaccaacattt 2750
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>emb|AL356785.18| Human DNA sequence from clone RP13-206I21 on chromosome Xp11.3-21.1
             Contains part of the ATP11C gene for ATPase, Class VI,
             type 11C (ATPIG, ATPIQ), complete sequence
          Length = 165572

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    ccagtttcatataaaggata 36
             ||||||||||||||||||||
Sbjct: 47671 ccagtttcatataaaggata 47652
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>emb|AL132793.24|HSDJ324B8 Human DNA sequence from clone RP3-324B8 on chromosome 6q12-13, complete
             sequence
          Length = 120535

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   aatatttataacaaaactat 217
             ||||||||||||||||||||
Sbjct: 55423 aatatttataacaaaactat 55404
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>emb|BX769175.12| Zebrafish DNA sequence from clone DKEY-229K5 in linkage group 3,
             complete sequence
          Length = 154794

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    tgacattttttgcagattta 99
             ||||||||||||||||||||
Sbjct: 30171 tgacattttttgcagattta 30152
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>emb|X83524.1|NTGLUTLIG N.tabacum mRNA for L-Glutamate:tRNA-Glu ligase
          Length = 2172

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 19   agtttcatataaaggataggatag 42
            |||||||||||||||||| |||||
Sbjct: 1395 agtttcatataaaggataagatag 1372
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>emb|X74730.1|VCTCPHPAB V.cholerae tcpH, tcpP, tcpA,tcpB, tcpQ, tcpI and tcpC genes
          Length = 5024

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 149  tgacaggaaaaccaacattt 168
            ||||||||||||||||||||
Sbjct: 1830 tgacaggaaaaccaacattt 1811
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>emb|AL929272.10| Mouse DNA sequence from clone RP23-69H10 on chromosome 11 Contains the
             5' end of the Vrk2 gene for vaccinia related kinase 2 and
             a CpG island, complete sequence
          Length = 196753

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   cacactgtgaaattacatgc 143
             ||||||||||||||||||||
Sbjct: 54838 cacactgtgaaattacatgc 54857
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>emb|BX470266.10| Zebrafish DNA sequence from clone DKEYP-9D4 in linkage group 1, complete
              sequence
          Length = 194021

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    taatatttataacaaaacta 216
              ||||||||||||||||||||
Sbjct: 122733 taatatttataacaaaacta 122714
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>ref|NG_001337.1| Homo sapiens T cell receptor beta variable orphans on chromosome 9
             (TRBVOR9@) on chromosome 9
          Length = 194564

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 196   ttaatatttataacaaaact 215
             ||||||||||||||||||||
Sbjct: 78943 ttaatatttataacaaaact 78962
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>gb|AC007784.7| Homo sapiens 12p13 BAC RPCI11-1092P21 (Roswell Park Cancer Library
             Human BAC Library) complete sequence
          Length = 188364

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    gatttccagtttcatataaa 31
             ||||||||||||||||||||
Sbjct: 30064 gatttccagtttcatataaa 30045
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>emb|BX323042.7| Zebrafish DNA sequence from clone DKEYP-78G2 in linkage group 6, complete
              sequence
          Length = 206473

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     tgacattttttgcagattta 99
              ||||||||||||||||||||
Sbjct: 106095 tgacattttttgcagattta 106076
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>ref|NM_073859.3| Caenorhabditis elegans W07G4.4 (W07G4.4) mRNA, complete cds
          Length = 2045

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 acatcacggcacactgtgaa 134
           ||||||||||||||||||||
Sbjct: 586 acatcacggcacactgtgaa 567
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    tatttataacaaaactataa 219
              ||||||||||||||||||||
Sbjct: 591778 tatttataacaaaactataa 591797
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>gb|DQ000309.1| Nicotiana benthamiana glutamyl-tRNA synthetase (GRS) mRNA, complete
            cds
          Length = 1710

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 19   agtttcatataaaggataggatag 42
            |||||||||||||||||| |||||
Sbjct: 1320 agtttcatataaaggataagatag 1297
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>dbj|AP002805.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0004I20
          Length = 94135

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   tatttataacaaaactataa 219
             ||||||||||||||||||||
Sbjct: 68395 tatttataacaaaactataa 68414
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>dbj|AP000616.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              clone:P0514G12
          Length = 138929

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    tatttataacaaaactataa 219
              ||||||||||||||||||||
Sbjct: 137286 tatttataacaaaactataa 137305
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>gb|AC002485.1|AC002485 Human PAC clone CTA-212D3, complete sequence
          Length = 215609

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 198    aatatttataacaaaactat 217
              ||||||||||||||||||||
Sbjct: 212635 aatatttataacaaaactat 212654
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>emb|Z78018.1|CEW07G4 Caenorhabditis elegans Cosmid W07G4, complete sequence
          Length = 31001

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   acatcacggcacactgtgaa 134
             ||||||||||||||||||||
Sbjct: 24714 acatcacggcacactgtgaa 24695
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>gb|AC140288.5| Mus musculus BAC clone RP23-348K1 from 14, complete sequence
          Length = 250519

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   aaaccaacatttctcccatt 176
             ||||||||||||||||||||
Sbjct: 38040 aaaccaacatttctcccatt 38021
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>emb|AL773558.14| Zebrafish DNA sequence from clone CH211-207M11 in linkage group 16,
              complete sequence
          Length = 196875

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 196    ttaatatttataacaaaactataa 219
              ||||||||||||||| ||||||||
Sbjct: 194841 ttaatatttataacataactataa 194864
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>emb|BX005280.14| Zebrafish DNA sequence from clone CH211-256J23 in linkage group 18,
             complete sequence
          Length = 164570

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    tgacattttttgcagattta 99
             ||||||||||||||||||||
Sbjct: 93532 tgacattttttgcagattta 93513
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>gb|BT020714.1| Bos taurus golgi autoantigen, golgin subfamily a, 7 (GOLGA7), mRNA,
            complete cds
          Length = 1836

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 201  atttataacaaaactataat 220
            ||||||||||||||||||||
Sbjct: 1290 atttataacaaaactataat 1271
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>gb|AC171726.1| Lycopersicon esculentum chromosome 01 clone C01HBa0088L02, complete
             sequence
          Length = 120525

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 19    agtttcatataaaggataggatag 42
             |||||||||||||||||| |||||
Sbjct: 79969 agtttcatataaaggataagatag 79946


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,664,272
Number of Sequences: 3902068
Number of extensions: 3664272
Number of successful extensions: 73538
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73412
Number of HSP's gapped (non-prelim): 125
length of query: 380
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 358
effective length of database: 17,147,199,772
effective search space: 6138697518376
effective search space used: 6138697518376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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