>ref|XM_466265.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1187

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 206 tccaggtcgccaagtcccaagctttttgctttcttgaatgcctc 249
           |||||||| || |||||||||||| ||||||||||||| |||||
Sbjct: 929 tccaggtcccctagtcccaagcttcttgctttcttgaacgcctc 886

>ref|XM_507487.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1712_E04.5 mRNA
          Length = 1235

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 206 tccaggtcgccaagtcccaagctttttgctttcttgaatgcctc 249
           |||||||| || |||||||||||| ||||||||||||| |||||
Sbjct: 932 tccaggtcccctagtcccaagcttcttgctttcttgaacgcctc 889

>ref|XM_506829.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1712_E04.5 mRNA
          Length = 1267

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 206 tccaggtcgccaagtcccaagctttttgctttcttgaatgcctc 249
           |||||||| || |||||||||||| ||||||||||||| |||||
Sbjct: 961 tccaggtcccctagtcccaagcttcttgctttcttgaacgcctc 918

>gb|AY224558.1| Oryza sativa (japonica cultivar-group) isolate 29037 gamma
           hydroxybutyrate dehydrogenase-like protein mRNA,
           complete cds
          Length = 882

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 206 tccaggtcgccaagtcccaagctttttgctttcttgaatgcctc 249
           |||||||| || |||||||||||| ||||||||||||| |||||
Sbjct: 827 tccaggtcccctagtcccaagcttcttgctttcttgaacgcctc 784

>dbj|AB110167.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical
           protein, complete cds, clone: 12FPR024
          Length = 1163

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 206 tccaggtcgccaagtcccaagctttttgctttcttgaatgcctc 249
           |||||||| || |||||||||||| ||||||||||||| |||||
Sbjct: 910 tccaggtcccctagtcccaagcttcttgctttcttgaacgcctc 867

>dbj|AK109435.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-H04, full
           insert sequence
          Length = 1220

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 206 tccaggtcgccaagtcccaagctttttgctttcttgaatgcctc 249
           |||||||| || |||||||||||| ||||||||||||| |||||
Sbjct: 958 tccaggtcccctagtcccaagcttcttgctttcttgaacgcctc 915

>dbj|AK104168.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E09, full
           insert sequence
          Length = 1187

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 206 tccaggtcgccaagtcccaagctttttgctttcttgaatgcctc 249
           |||||||| || |||||||||||| ||||||||||||| |||||
Sbjct: 929 tccaggtcccctagtcccaagcttcttgctttcttgaacgcctc 886

>dbj|AK071800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114G06, full
           insert sequence
          Length = 1235

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 206 tccaggtcgccaagtcccaagctttttgctttcttgaatgcctc 249
           |||||||| || |||||||||||| ||||||||||||| |||||
Sbjct: 932 tccaggtcccctagtcccaagcttcttgctttcttgaacgcctc 889

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                           
Query: 206      tccaggtcgccaagtcccaagctttttgctttcttgaatgcct 248
                |||||||| || |||||||||||| ||||||||||||| ||||
Sbjct: 21367657 tccaggtcccctagtcccaagcttcttgctttcttgaacgcct 21367615

>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1712_E04
          Length = 110098

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 206   tccaggtcgccaagtcccaagctttttgctttcttgaatgcct 248
             |||||||| || |||||||||||| ||||||||||||| ||||
Sbjct: 27610 tccaggtcccctagtcccaagcttcttgctttcttgaacgcct 27568

>gb|AF067418.1|AF067418 Xenopus laevis focus forming activity 1 (FFA-1) mRNA, complete cds
          Length = 5143

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 221  cccaagctttttgctttcttgaatgc 246
            |||||| |||||||||||||||||||
Sbjct: 4443 cccaaggtttttgctttcttgaatgc 4418

>gb|AC113615.3| Homo sapiens BAC clone RP11-586D19 from 4, complete sequence
          Length = 164043

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 82     atgggtaggaggaactacaaaaatatctg 110
              |||||||| ||||||| ||||||||||||
Sbjct: 140386 atgggtagaaggaactccaaaaatatctg 140358

>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome
          Length = 1838554

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    tcccaagctttttgctttct 239
              ||||||||||||||||||||
Sbjct: 549022 tcccaagctttttgctttct 549041

>gb|AE006524.1| Streptococcus pyogenes M1 GAS, section 53 of 167 of the complete genome
          Length = 10949

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   tcccaagctttttgctttct 239
             ||||||||||||||||||||
Sbjct: 10807 tcccaagctttttgctttct 10826

>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
          Length = 1937111

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    tcccaagctttttgctttct 239
              ||||||||||||||||||||
Sbjct: 608918 tcccaagctttttgctttct 608937

>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome
          Length = 1860355

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    tcccaagctttttgctttct 239
              ||||||||||||||||||||
Sbjct: 590306 tcccaagctttttgctttct 590325

>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome
          Length = 1928252

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    tcccaagctttttgctttct 239
              ||||||||||||||||||||
Sbjct: 590154 tcccaagctttttgctttct 590173

>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome
          Length = 1836467

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    tcccaagctttttgctttct 239
              ||||||||||||||||||||
Sbjct: 588905 tcccaagctttttgctttct 588924

>gb|BT012834.1| Lycopersicon esculentum clone 113891R, mRNA sequence
          Length = 1105

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 221 cccaagctttttgctttcttgaatgcctcatt 252
           ||||||||  |||| |||||||||||||||||
Sbjct: 845 cccaagctccttgccttcttgaatgcctcatt 814

>gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosome 16, complete
             sequence
          Length = 196646

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   ttttgctttcttgaatgcct 248
             ||||||||||||||||||||
Sbjct: 16568 ttttgctttcttgaatgcct 16549

>gb|AC138605.1| Mus musculus BAC clone RP23-392L23 from chromosome 16, complete sequence
          Length = 172684

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 229    ttttgctttcttgaatgcct 248
              ||||||||||||||||||||
Sbjct: 145713 ttttgctttcttgaatgcct 145694

>gb|AC127323.3| Mus musculus BAC clone RP23-242D19 from 18, complete sequence
          Length = 208152

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   tttgctttcttgaatgcctc 249
             ||||||||||||||||||||
Sbjct: 90009 tttgctttcttgaatgcctc 89990

>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome
          Length = 1897573

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    tcccaagctttttgctttct 239
              ||||||||||||||||||||
Sbjct: 546625 tcccaagctttttgctttct 546644

>emb|AL009173.2|HS32F7 Human DNA sequence from clone RP1-32F7 on chromosome Xq21.2-21.33
             Contains the NAP1L3 gene for nucleosome assembly protein
             1-like 3, the FLJ37659 gene and a CpG island, complete
             sequence
          Length = 101167

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   aaaaatatctgcatgcccat 119
             ||||||||||||||||||||
Sbjct: 28465 aaaaatatctgcatgcccat 28484

>gb|AC105933.2| Homo sapiens chromosome 3 clone RP11-454I5, complete sequence
          Length = 175370

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   ttttgctttcttgaatgcctcatt 252
             |||||||||||||| |||||||||
Sbjct: 50269 ttttgctttcttgagtgcctcatt 50246

>gb|AC105750.2| Homo sapiens chromosome 3 clone RP11-776K4, complete sequence
          Length = 166478

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 229    ttttgctttcttgaatgcctcatt 252
              |||||||||||||| |||||||||
Sbjct: 166413 ttttgctttcttgagtgcctcatt 166390

>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome
          Length = 1900521

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    tcccaagctttttgctttct 239
              ||||||||||||||||||||
Sbjct: 529154 tcccaagctttttgctttct 529173

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      accttcatgcccaagccaat 38
               ||||||||||||||||||||
Sbjct: 1126001 accttcatgcccaagccaat 1126020

>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome
          Length = 1894275

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 220     tcccaagctttttgctttct 239
               ||||||||||||||||||||
Sbjct: 1367587 tcccaagctttttgctttct 1367568


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,944,296
Number of Sequences: 3902068
Number of extensions: 1944296
Number of successful extensions: 36282
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36173
Number of HSP's gapped (non-prelim): 109
length of query: 254
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 232
effective length of database: 17,147,199,772
effective search space: 3978150347104
effective search space used: 3978150347104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)