ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet32a12 |
|---|---|
| Clone Library Name | barley_pub |
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 98.6 bits (244), Expect = 3e-21 Identities = 47/48 (97%), Positives = 47/48 (97%) Frame = -2 Query: 406 LAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 263 LAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF Sbjct: 240 LAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 287
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 97.1 bits (240), Expect = 9e-21 Identities = 46/48 (95%), Positives = 46/48 (95%) Frame = -2 Query: 406 LAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 263 LAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF Sbjct: 237 LAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 284
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 59.3 bits (142), Expect = 2e-09 Identities = 28/46 (60%), Positives = 31/46 (67%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 263 E+ + RLAM+AFLGF VQ TGKGP N HLSDP H TI TF Sbjct: 205 ELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTF 250
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 52.4 bits (124), Expect = 3e-07 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 E+K+ RLAM + GF VQA TGKGPL N A HLSDP++ Sbjct: 216 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVN 254
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 52.4 bits (124), Expect = 3e-07 Identities = 24/44 (54%), Positives = 31/44 (70%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFD 269 EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ ++ Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWN 258
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 52.0 bits (123), Expect = 3e-07 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 209 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 247
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 52.0 bits (123), Expect = 3e-07 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 250
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 52.0 bits (123), Expect = 3e-07 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 214 EIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVN 252
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 52.0 bits (123), Expect = 3e-07 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 252
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 52.0 bits (123), Expect = 3e-07 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 252
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 52.0 bits (123), Expect = 3e-07 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 252
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 52.0 bits (123), Expect = 3e-07 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 252
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 52.0 bits (123), Expect = 3e-07 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 52.0 bits (123), Expect = 3e-07 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 52.0 bits (123), Expect = 3e-07 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 52.0 bits (123), Expect = 3e-07 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 52.0 bits (123), Expect = 3e-07 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 52.0 bits (123), Expect = 3e-07 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 64 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 102
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 52.0 bits (123), Expect = 3e-07 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 72 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 110
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 52.0 bits (123), Expect = 3e-07 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 52.0 bits (123), Expect = 3e-07 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 52.0 bits (123), Expect = 3e-07 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 52.0 bits (123), Expect = 3e-07 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 52.0 bits (123), Expect = 3e-07 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 51.6 bits (122), Expect = 4e-07 Identities = 24/37 (64%), Positives = 28/37 (75%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDP 290 EIK+ RLAM A LGF +QA TG+GP+ N A HLSDP Sbjct: 225 EIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDP 261
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 51.6 bits (122), Expect = 4e-07 Identities = 26/45 (57%), Positives = 32/45 (71%), Gaps = 1/45 (2%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAA-TGKGPLNNWATHLSDPLHTTIFD 269 EIK+ RLA++A +GF VQ +A G GPL N ATHL+DP H I D Sbjct: 192 EIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNIGD 236
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 51.2 bits (121), Expect = 6e-07 Identities = 23/39 (58%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGP+ N A HL+DP++ Sbjct: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVN 250
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 51.2 bits (121), Expect = 6e-07 Identities = 23/39 (58%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 E+K+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 212 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 250
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 51.2 bits (121), Expect = 6e-07 Identities = 23/39 (58%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 E+K+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 213 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 51.2 bits (121), Expect = 6e-07 Identities = 23/39 (58%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 E+K+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 217 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 255
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 51.2 bits (121), Expect = 6e-07 Identities = 23/39 (58%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 E+K+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 204 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 242
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 51.2 bits (121), Expect = 6e-07 Identities = 23/39 (58%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A H++DP++ Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVN 253
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 51.2 bits (121), Expect = 6e-07 Identities = 23/39 (58%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A H++DP++ Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVN 253
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 51.2 bits (121), Expect = 6e-07 Identities = 23/39 (58%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGP+ N A HL+DP++ Sbjct: 222 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 260
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 51.2 bits (121), Expect = 6e-07 Identities = 23/39 (58%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 E+K+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 154 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 192
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 51.2 bits (121), Expect = 6e-07 Identities = 23/39 (58%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGP+ N A HL+DP++ Sbjct: 226 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 264
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 51.2 bits (121), Expect = 6e-07 Identities = 23/39 (58%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGP+ N A HL+DP++ Sbjct: 226 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 264
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 51.2 bits (121), Expect = 6e-07 Identities = 23/39 (58%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 E+K+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 203 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 241
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 50.8 bits (120), Expect = 7e-07 Identities = 23/39 (58%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL+N HL+DP++ Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVN 253
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 50.8 bits (120), Expect = 7e-07 Identities = 26/34 (76%), Positives = 30/34 (88%) Frame = -2 Query: 406 LAEIKHARLAMVAFLGFAVQAAATGKGPLNNWAT 305 LAEIKH+RLAMVAFL FA+QAA TGKGP++ AT Sbjct: 240 LAEIKHSRLAMVAFLIFALQAAFTGKGPVSFLAT 273
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 50.4 bits (119), Expect = 1e-06 Identities = 22/39 (56%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 E+K RLAM++ GF VQA TGKGPL N A H++DP++ Sbjct: 213 ELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVN 251
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 50.4 bits (119), Expect = 1e-06 Identities = 24/43 (55%), Positives = 28/43 (65%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIF 272 EIK+ RLAM A LGF VQA TGKGP+ N HL++P F Sbjct: 222 EIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAF 264
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 50.4 bits (119), Expect = 1e-06 Identities = 23/39 (58%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL N A HL++P++ Sbjct: 193 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVN 231
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 50.4 bits (119), Expect = 1e-06 Identities = 22/39 (56%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 E+K+ RLAM + GF VQA TGKGP+ N A HL+DP++ Sbjct: 215 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 253
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 50.4 bits (119), Expect = 1e-06 Identities = 22/39 (56%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 E+K+ RLAM + GF VQA TGKGPL N A H++DP++ Sbjct: 210 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVN 248
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 50.4 bits (119), Expect = 1e-06 Identities = 22/39 (56%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 E+K+ RLAM + GF VQA TGKGP+ N A HL+DP++ Sbjct: 215 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 253
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 50.1 bits (118), Expect = 1e-06 Identities = 22/38 (57%), Positives = 28/38 (73%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 287 EIK+ RLAM + GF VQA TGKGP+ N A H++DP+ Sbjct: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPV 249
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 50.1 bits (118), Expect = 1e-06 Identities = 22/37 (59%), Positives = 25/37 (67%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDP 290 EIK+ RLAM LGF QA TG+GP+ NW HL DP Sbjct: 70 EIKNGRLAMSGMLGFYAQAIVTGEGPVENWLYHLQDP 106
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 50.1 bits (118), Expect = 1e-06 Identities = 23/38 (60%), Positives = 28/38 (73%) Frame = -2 Query: 397 IKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 IK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 216 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 49.7 bits (117), Expect = 2e-06 Identities = 22/44 (50%), Positives = 30/44 (68%) Frame = -2 Query: 406 LAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTI 275 L EIK+ RLAM+A LG+ +QA TG GP N HL+DP++ + Sbjct: 223 LKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNV 266
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 49.7 bits (117), Expect = 2e-06 Identities = 23/37 (62%), Positives = 27/37 (72%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDP 290 EIK+ RLAM + GF VQA TGKGP+ N A HL+DP Sbjct: 204 EIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADP 240
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 49.3 bits (116), Expect = 2e-06 Identities = 22/39 (56%), Positives = 29/39 (74%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 EIK+ RLAM + GF VQA TGKGPL + A H++DP++ Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVN 252
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 49.3 bits (116), Expect = 2e-06 Identities = 23/38 (60%), Positives = 27/38 (71%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 287 EIK+ RLAM + GF VQA TGKGPL N HL+DP+ Sbjct: 216 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPV 253
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 49.3 bits (116), Expect = 2e-06 Identities = 24/46 (52%), Positives = 30/46 (65%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 263 EIK+ RLAM+A +G Q TG GP++N HL+DP H TIF F Sbjct: 222 EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAF 267
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 49.3 bits (116), Expect = 2e-06 Identities = 24/46 (52%), Positives = 30/46 (65%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 263 EIK+ RLAM+A +G Q TG GP++N HL+DP H TIF F Sbjct: 222 EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAF 267
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 49.3 bits (116), Expect = 2e-06 Identities = 23/37 (62%), Positives = 27/37 (72%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDP 290 EIK+ RLAM + LGF VQA TGKGP+ N HL+DP Sbjct: 201 EIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADP 237
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 48.9 bits (115), Expect = 3e-06 Identities = 22/39 (56%), Positives = 28/39 (71%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 E+K+ RLAM + GF V A TGKGPL N A HL+DP++ Sbjct: 176 ELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVN 214
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 48.9 bits (115), Expect = 3e-06 Identities = 23/38 (60%), Positives = 26/38 (68%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 287 EIK+ RLAM + GF VQA TGKGPL N HL DP+ Sbjct: 216 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPV 253
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 48.9 bits (115), Expect = 3e-06 Identities = 21/38 (55%), Positives = 28/38 (73%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 287 EIK+ RLAM + GF VQA TGKGP+ N + H++DP+ Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPV 250
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 48.9 bits (115), Expect = 3e-06 Identities = 21/38 (55%), Positives = 28/38 (73%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 287 EIK+ RLAM + GF VQA TGKGP+ N + H++DP+ Sbjct: 185 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPV 222
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 48.5 bits (114), Expect = 4e-06 Identities = 21/37 (56%), Positives = 27/37 (72%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDP 290 E+K+ RLAM + GF VQA TGKGP+ N + HL+DP Sbjct: 213 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADP 249
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 48.5 bits (114), Expect = 4e-06 Identities = 22/38 (57%), Positives = 27/38 (71%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 287 EIK+ RLAM + GF VQA TGKGP+ N HL+DP+ Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPV 251
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 48.5 bits (114), Expect = 4e-06 Identities = 22/38 (57%), Positives = 27/38 (71%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 287 EIK+ RLAM + GF VQA TGKGP+ N HL+DP+ Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPV 250
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 48.5 bits (114), Expect = 4e-06 Identities = 22/39 (56%), Positives = 28/39 (71%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 E+K+ RLAM + GF VQA TGKGPL N A HL+ P++ Sbjct: 211 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVN 249
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 48.5 bits (114), Expect = 4e-06 Identities = 22/38 (57%), Positives = 27/38 (71%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 287 EIK+ RLAM + GF VQA TGKGP+ N HL+DP+ Sbjct: 98 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPV 135
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 48.5 bits (114), Expect = 4e-06 Identities = 22/39 (56%), Positives = 27/39 (69%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 284 E K+ RLAM + GF +QA TGKGPL N A HL DP++ Sbjct: 215 ETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVN 253
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 47.4 bits (111), Expect = 8e-06 Identities = 21/38 (55%), Positives = 27/38 (71%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 287 EIK+ RLAM + GF VQA TGKGP+ N H++DP+ Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPV 250
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 47.4 bits (111), Expect = 8e-06 Identities = 21/38 (55%), Positives = 27/38 (71%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 287 EIK+ RLAM + GF VQA TGKGP+ N H++DP+ Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPV 250
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 47.4 bits (111), Expect = 8e-06 Identities = 22/38 (57%), Positives = 26/38 (68%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 287 EIK+ RLAM + GF VQA TGKGPL N HL +P+ Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPV 250
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 47.0 bits (110), Expect = 1e-05 Identities = 24/46 (52%), Positives = 27/46 (58%) Frame = -2 Query: 403 AEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDT 266 AEIK+ RLA+ A LGF VQ G PL N A HL PL I D+ Sbjct: 125 AEIKNGRLALTALLGFEVQRHVVGGSPLANLAEHLQQPLQRNIADS 170 Score = 42.4 bits (98), Expect = 3e-04 Identities = 19/43 (44%), Positives = 27/43 (62%) Frame = -2 Query: 403 AEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTI 275 AE+K+ RLA+ A G Q ATG+ PL N + HL++P+ I Sbjct: 313 AEVKNGRLALTAVAGLTAQYLATGESPLANLSAHLANPIGANI 355 Score = 37.0 bits (84), Expect = 0.011 Identities = 17/30 (56%), Positives = 20/30 (66%) Frame = -2 Query: 403 AEIKHARLAMVAFLGFAVQAAATGKGPLNN 314 AEIK+ RLAM G VQ+ TGK P+NN Sbjct: 498 AEIKNGRLAMNGMFGLEVQSHVTGKSPINN 527
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 46.6 bits (109), Expect = 1e-05 Identities = 20/38 (52%), Positives = 27/38 (71%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 287 E+K+ RLAM + GF VQA TGKGP+ N H++DP+ Sbjct: 213 ELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPV 250
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 46.6 bits (109), Expect = 1e-05 Identities = 20/38 (52%), Positives = 27/38 (71%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 287 E+K+ RLAM + GF VQA TGKGP+ N H++DP+ Sbjct: 211 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPV 248
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 45.1 bits (105), Expect = 4e-05 Identities = 21/32 (65%), Positives = 26/32 (81%) Frame = -2 Query: 403 AEIKHARLAMVAFLGFAVQAAATGKGPLNNWA 308 AEIKHARLAMV+F G+ VQA +TG+G L + A Sbjct: 236 AEIKHARLAMVSFFGYGVQALSTGEGALGSLA 267
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 43.9 bits (102), Expect = 9e-05 Identities = 21/43 (48%), Positives = 26/43 (60%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIF 272 EIK+ RLA + GF VQA TGKGP+ N HL++P F Sbjct: 201 EIKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAF 243
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/45 (46%), Positives = 26/45 (57%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDT 266 EIK+ RLAM LG Q ATG+ PL N A H ++P+ I T Sbjct: 285 EIKNGRLAMTGLLGLTFQYLATGESPLANLAAHFANPVGANITTT 329 Score = 40.4 bits (93), Expect = 0.001 Identities = 20/43 (46%), Positives = 24/43 (55%) Frame = -2 Query: 403 AEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTI 275 AEIK+ RLAM+ G VQ T +GP+ N HL PL I Sbjct: 96 AEIKNGRLAMIGMFGLEVQNHVTAQGPVANLIEHLRHPLAANI 138
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 34.3 bits (77), Expect = 0.072 Identities = 17/34 (50%), Positives = 21/34 (61%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHL 299 E+K+ RLAM + GF VQA + K L N A HL Sbjct: 216 ELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHL 249
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 32.7 bits (73), Expect = 0.21 Identities = 19/29 (65%), Positives = 21/29 (72%) Frame = -2 Query: 406 LAEIKHARLAMVAFLGFAVQAAATGKGPL 320 LAEIKHARLAM+A L F + A GK PL Sbjct: 229 LAEIKHARLAMLAMLIFYFE-AGQGKTPL 256
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 32.0 bits (71), Expect = 0.36 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSD 293 E+ H RLAM+A GF Q A +G + W T+ D Sbjct: 174 ELSHGRLAMIAAAGFLAQEAVSG----DTWGTYWGD 205
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 31.6 bits (70), Expect = 0.47 Identities = 18/29 (62%), Positives = 21/29 (72%) Frame = -2 Query: 406 LAEIKHARLAMVAFLGFAVQAAATGKGPL 320 LAEIKH+RLAM+A L F + A GK PL Sbjct: 224 LAEIKHSRLAMLAMLIFYFE-AGQGKTPL 251
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 31.6 bits (70), Expect = 0.47 Identities = 18/29 (62%), Positives = 21/29 (72%) Frame = -2 Query: 406 LAEIKHARLAMVAFLGFAVQAAATGKGPL 320 +AEIKHARLAM+A L F + A GK PL Sbjct: 224 VAEIKHARLAMLAMLIFYFE-AGQGKTPL 251
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -3 Query: 318 TTGPPTSATRCTPPSSTPSAPL 253 T PPT+ T PP++TPS P+ Sbjct: 1483 TPSPPTTTTTTPPPTTTPSPPM 1504 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -3 Query: 318 TTGPPTSATRCTPPSSTPSAPL 253 T PPT+ T PP++TPS P+ Sbjct: 1421 TPSPPTTTTTTPPPTTTPSPPI 1442 Score = 29.3 bits (64), Expect = 2.3 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -3 Query: 318 TTGPPTSATRCTPPSSTPSAP 256 T PPT+ T PP++TPS P Sbjct: 1601 TPSPPTTTTTTPPPTTTPSPP 1621 Score = 29.3 bits (64), Expect = 2.3 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -3 Query: 318 TTGPPTSATRCTPPSSTPSAP 256 T PPT+ T PP++TPS P Sbjct: 1522 TPSPPTTTTTTPPPTTTPSPP 1542 Score = 28.5 bits (62), Expect = 4.0 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = -3 Query: 318 TTGPPTSATRCTPPSSTPSAPL 253 T PP + T PP++TPS+P+ Sbjct: 1664 TPSPPITTTTTPPPTTTPSSPI 1685 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -3 Query: 318 TTGPPTSATRCTPPSSTPSAP 256 T PPT T PP++TPS P Sbjct: 1585 TPSPPTITTTTPPPTTTPSPP 1605 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -3 Query: 318 TTGPPTSATRCTPPSSTPSAP 256 T PP S T PP++TPS P Sbjct: 1453 TPSPPISTTTTPPPTTTPSPP 1473
>SGS3_DROER (P13730) Salivary glue protein Sgs-3 precursor| Length = 328 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%) Frame = -3 Query: 318 TTGPPTSATRCTPPSST----PSAPLKWSVVEQFLSAQLQNGRTRVRVT 184 TT P + TRC PP++T P+ P + + + +A+ RT VR T Sbjct: 50 TTCRPPTTTRCPPPTTTRCPPPTRPAECTATTKRPTARPTTRRTTVRAT 98
>LCAT_CHICK (P53760) Phosphatidylcholine-sterol acyltransferase precursor (EC| 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase) (Fragment) Length = 413 Score = 29.3 bits (64), Expect = 2.3 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = -3 Query: 309 PPTSATRCTPPSSTPSAPLKWSVVEQFLSAQLQNGRTRVRVTNVLWFC 166 PPT+ P +STP W +V FL QL+ + V N W C Sbjct: 31 PPTTTPEAPPTNSTP----PWCLVPGFLGNQLEAKLDKPDVVN--WMC 72
>MURE_WOLSU (Q7M8F9) UDP-N-acetylmuramoylalanyl-D-glutamate--2,| 6-diaminopimelate ligase (EC 6.3.2.13) (UDP-N-acetylmuramyl-tripeptide synthetase) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-tripeptide synthetase) Length = 434 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +3 Query: 42 H*VTIGSYFTNHQVPAALLCDRTSIIIN-KGSLRYPLIHHSSYKTKARSLHG 194 H + + F + P + D + N + +L Y + H SSY KA SLHG Sbjct: 173 HYIQTKNSFFDDSTPKLINKDESKAKFNLQNALSYGIEHPSSYHVKAYSLHG 224
>FCPD_MACPY (Q40298) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast| precursor (Fragment) Length = 182 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWA 308 E+KH R+AM+A G Q A G L+N A Sbjct: 40 EVKHGRIAMLAIAGHLTQQNARLPGMLSNSA 70
>TSN32_HUMAN (Q96QS1) Tetraspanin-32 (Protein Phemx)| Length = 320 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +3 Query: 285 CSGSLRWVAQLLSGPLPVAAACTA 356 CSGSLRW+ + + PLP++ A Sbjct: 275 CSGSLRWLQESDAAPLPLSCHLAA 298
>HEMH2_ARATH (O04921) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1)| (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) Length = 512 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -2 Query: 403 AEIKHARLAMVAFLGFAVQAAATGKGPLNNW 311 AE + R AM+A L V TGKG L+ W Sbjct: 476 AETWNGRAAMLAVLALLVLEVTTGKGFLHQW 506
>FCPA_MACPY (Q40297) Fucoxanthin-chlorophyll a-c binding protein A, chloroplast| precursor Length = 217 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGPLNNWA 308 E+KH R+AM+A G Q A G L+N A Sbjct: 75 EVKHGRIAMLAIAGHLTQQNARLPGMLSNSA 105
>CCAC_AMPCA (P55738) Caroteno-chlorophyll a-c binding protein (Fragment)| Length = 102 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAAATGKGP 323 EIKH R+AM+A +G+ Q TGK P Sbjct: 36 EIKHGRVAMLATMGYITQ-EITGKLP 60
>FCPD_PHATR (Q08587) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast| precursor Length = 197 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAA 341 EIKH R++M+A +G+ VQ A Sbjct: 67 EIKHGRISMLAVVGYLVQEA 86
>FCPC_PHATR (Q08586) Fucoxanthin-chlorophyll a-c binding protein C, chloroplast| precursor Length = 197 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = -2 Query: 400 EIKHARLAMVAFLGFAVQAA 341 EIKH R++M+A +G+ VQ A Sbjct: 67 EIKHGRISMLAVVGYLVQEA 86
>NIFH_CLOCB (Q59270) Nitrogenase iron protein (EC 1.18.6.1) (Nitrogenase| component II) (Nitrogenase Fe protein) (Nitrogenase reductase) Length = 271 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +3 Query: 75 HQVPAALLCDRTSIIINKGSLRYPLIHHSSYKTKARSLHG 194 H VPA + C R I + S P+ Y+T AR + G Sbjct: 206 HFVPATMRCRRRKSIKRQLSTFRPMTQADEYRTLARKIDG 245
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9| Length = 3178 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/56 (33%), Positives = 23/56 (41%) Frame = -3 Query: 318 TTGPPTSATRCTPPSSTPSAPLKWSVVEQFLSAQLQNGRTRVRVTNVLWFCMTSDG 151 TT P TS T + SSTPS+ SV S Q + T +SDG Sbjct: 493 TTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTTTKSETTTSSDG 548
>IF3A_YEAST (P38249) Eukaryotic translation initiation factor 3 110 kDa subunit| (eIF3 p110) (Translation initiation factor eIF3, p110 subunit) (eIF3a) Length = 964 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -3 Query: 315 TGPPTSATRCTPPSSTPSA-PLKWSVVEQFLSAQLQNG 205 + P T AT TP + TPS+ P K ++ E+ + +L G Sbjct: 925 SSPATPATPATPATPTPSSGPKKMTMAEKLRAKRLAKG 962 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,925,891 Number of Sequences: 219361 Number of extensions: 789340 Number of successful extensions: 2587 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 2462 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2581 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
