ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet32a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 418 e-114
2dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic D... 418 e-114
3dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic D... 418 e-114
4ref|NM_190573.1| Oryza sativa (japonica cultivar-group), predic... 416 e-113
5gb|AY106687.1| Zea mays PCO083606 mRNA sequence 186 4e-44
6ref|NM_187511.1| Oryza sativa (japonica cultivar-group), predic... 125 1e-25
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 125 1e-25
8gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome... 125 1e-25
9gb|AC134238.2| Oryza sativa (japonica cultivar-group) chromosome... 125 1e-25
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
11dbj|AK105994.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
12dbj|AK103225.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
13dbj|AK102985.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
14dbj|AK101206.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
15dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.021
16ref|XM_480153.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.34
17ref|XM_507134.1| PREDICTED Oryza sativa (japonica cultivar-group... 44 0.34
18ref|XM_480154.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.34
19ref|XM_479112.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.34
20gb|AY023208.1| Oryza sativa microsatellite MRG5533 containing (G... 44 0.34
21gb|AY184809.1| Oryza sativa (japonica cultivar-group) seed prote... 44 0.34
22gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 44 0.34
23gb|AC079038.3|AC079038 Oryza sativa chromosome 7 clone OSJNBb002... 44 0.34
24dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
25dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
26dbj|AP005895.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
27dbj|AP003940.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
28dbj|AK099134.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.34
29dbj|AK070325.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.34
30dbj|AK068639.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.34
31gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 42 1.3
32gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.3
33gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
34gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.3
35gb|AY596580.1| Saccharum officinarum clone SCCCCL3120B06, comple... 42 1.3
36gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
37ref|XM_860264.1| PREDICTED: Canis familiaris similar to GGA-bind... 42 1.3
38ref|XM_543748.2| PREDICTED: Canis familiaris similar to GGA-bind... 42 1.3
39ref|XM_541174.2| PREDICTED: Canis familiaris similar to radial s... 42 1.3
40emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.3
41ref|XM_690223.1| PREDICTED: Danio rerio hypothetical protein LOC... 42 1.3
42dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
43gb|AF317886.1|AF317886 Burkholderia pseudomallei putative aldehy... 42 1.3
44dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
45dbj|AK100353.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
46gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 1.3
47ref|NM_184891.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.2
48ref|XM_519468.1| PREDICTED: Pan troglodytes similar to Zinc fing... 40 5.2
49ref|NM_192981.1| Oryza sativa (japonica cultivar-group), predic... 40 5.2
50ref|XM_476653.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.2
51gb|AY368703.1| Manduca sexta N-acetylglucosaminidase mRNA, compl... 40 5.2
52emb|AL607122.20| Human DNA sequence from clone RP11-511I2 on chr... 40 5.2
53emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genom... 40 5.2
54gb|AC148926.4| Pan troglodytes BAC clone RP43-136P16 from chromo... 40 5.2
55gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 5.2
56dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
57gb|AC156029.2| Mus musculus BAC clone RP23-42O8 from chromosome ... 40 5.2
58gb|AF311321.1|AF311321 Sinorhizobium fredii ORF162 (orf162) gene... 40 5.2
59dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.2
60gb|AC145857.3| Pan troglodytes BAC clone RP43-6D4 from chromosom... 40 5.2
61gb|AF274566.1|AF274566 Schizophyllum commune intermediate peptid... 40 5.2
62dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.2
63dbj|AP003546.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
64dbj|AP002908.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
65dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
66dbj|AK111466.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
67dbj|AK109551.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
68dbj|AP003704.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
69gb|AY105912.1| Zea mays PCO095569 mRNA sequence 40 5.2
70tpe|BN000667.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 5.2
71dbj|AP003499.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 5.2
72gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 5.2
73gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.2
74emb|AL844497.4|CNS08CAU Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.2
75emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.2
76emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.2
77gb|AC112263.4| Mus musculus BAC clone RP23-403P24 from 5, comple... 40 5.2
78gb|U13942.1|SCU13942 Schizophyllum commune UVM9-1 A-alpha X1 gen... 40 5.2
79gb|L43135.1|MTBPPQEF Methylobacterium extorquens putative protea... 40 5.2 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  418 bits (211), Expect = e-114
 Identities = 297/325 (91%), Gaps = 3/325 (0%)
 Strand = Plus / Plus

                                                                            
Query: 65       gtcagagcatgaggcctaggcgctggctggccacgtcgcagcggacgggcgcgagcccga 124
                |||| ||||| ||||| ||||||| |||||| ||||||||||||| ||||||||| ||||
Sbjct: 36261482 gtcacagcatcaggccgaggcgctcgctggcgacgtcgcagcggatgggcgcgaggccga 36261541

                                                                            
Query: 125      cgcggccgcgctccaggtcgtactccacccacacgttcatctggtggtggtgcccgatca 184
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36261542 cgcggccgcgctccaggtcgtactccacccacacgttcatctggtggtggtgcccgatca 36261601

                                                                            
Query: 185      cgtacgccatgatgggcaccatgtccgcgtttccgaacgtcaggcaccacacgccgtcgc 244
                |||||||  |||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 36261602 cgtacgctgtgatgggcaccatgtccgcgttcccgaacgtgaggcaccacacgccgtcgc 36261661

                                                                            
Query: 245      cgccgcgccgctccccggggaccttgtacagcagcctgtcccccgccaccgccatctccg 304
                |||| || ||||| ||||||||||||||||| ||||||||||||||||||| ||||| ||
Sbjct: 36261662 cgccacggcgctcgccggggaccttgtacaggagcctgtcccccgccaccgtcatctgcg 36261721

                                                                            
Query: 305      cgccgttgaacagcagcgtcacgcccggcagcctcgccgtcggcggagagcgcccctgcg 364
                ||||||||||||||||||| ||| | || ||||||||   |||||| | ||||||||| |
Sbjct: 36261722 cgccgttgaacagcagcgtgacggcggggagcctcgc---cggcggcgcgcgcccctggg 36261778

                                         
Query: 365      gcacgcggaagcaggtgtcgaacgc 389
                ||||||||||||| |||||||||||
Sbjct: 36261779 gcacgcggaagcatgtgtcgaacgc 36261803



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 329      ccggcagcctcgccgtcggcggag 352
                ||||||||||||||||||||||||
Sbjct: 40868627 ccggcagcctcgccgtcggcggag 40868604



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 242      cgccgccgcgccgctccccg 261
                ||||||||||||||||||||
Sbjct: 22382193 cgccgccgcgccgctccccg 22382174
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>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0446B05
          Length = 149145

 Score =  418 bits (211), Expect = e-114
 Identities = 297/325 (91%), Gaps = 3/325 (0%)
 Strand = Plus / Plus

                                                                         
Query: 65    gtcagagcatgaggcctaggcgctggctggccacgtcgcagcggacgggcgcgagcccga 124
             |||| ||||| ||||| ||||||| |||||| ||||||||||||| ||||||||| ||||
Sbjct: 11359 gtcacagcatcaggccgaggcgctcgctggcgacgtcgcagcggatgggcgcgaggccga 11418

                                                                         
Query: 125   cgcggccgcgctccaggtcgtactccacccacacgttcatctggtggtggtgcccgatca 184
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11419 cgcggccgcgctccaggtcgtactccacccacacgttcatctggtggtggtgcccgatca 11478

                                                                         
Query: 185   cgtacgccatgatgggcaccatgtccgcgtttccgaacgtcaggcaccacacgccgtcgc 244
             |||||||  |||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 11479 cgtacgctgtgatgggcaccatgtccgcgttcccgaacgtgaggcaccacacgccgtcgc 11538

                                                                         
Query: 245   cgccgcgccgctccccggggaccttgtacagcagcctgtcccccgccaccgccatctccg 304
             |||| || ||||| ||||||||||||||||| ||||||||||||||||||| ||||| ||
Sbjct: 11539 cgccacggcgctcgccggggaccttgtacaggagcctgtcccccgccaccgtcatctgcg 11598

                                                                         
Query: 305   cgccgttgaacagcagcgtcacgcccggcagcctcgccgtcggcggagagcgcccctgcg 364
             ||||||||||||||||||| ||| | || ||||||||   |||||| | ||||||||| |
Sbjct: 11599 cgccgttgaacagcagcgtgacggcggggagcctcgc---cggcggcgcgcgcccctggg 11655

                                      
Query: 365   gcacgcggaagcaggtgtcgaacgc 389
             ||||||||||||| |||||||||||
Sbjct: 11656 gcacgcggaagcatgtgtcgaacgc 11680
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>dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0406G08
          Length = 144233

 Score =  418 bits (211), Expect = e-114
 Identities = 297/325 (91%), Gaps = 3/325 (0%)
 Strand = Plus / Plus

                                                                          
Query: 65     gtcagagcatgaggcctaggcgctggctggccacgtcgcagcggacgggcgcgagcccga 124
              |||| ||||| ||||| ||||||| |||||| ||||||||||||| ||||||||| ||||
Sbjct: 138495 gtcacagcatcaggccgaggcgctcgctggcgacgtcgcagcggatgggcgcgaggccga 138554

                                                                          
Query: 125    cgcggccgcgctccaggtcgtactccacccacacgttcatctggtggtggtgcccgatca 184
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138555 cgcggccgcgctccaggtcgtactccacccacacgttcatctggtggtggtgcccgatca 138614

                                                                          
Query: 185    cgtacgccatgatgggcaccatgtccgcgtttccgaacgtcaggcaccacacgccgtcgc 244
              |||||||  |||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 138615 cgtacgctgtgatgggcaccatgtccgcgttcccgaacgtgaggcaccacacgccgtcgc 138674

                                                                          
Query: 245    cgccgcgccgctccccggggaccttgtacagcagcctgtcccccgccaccgccatctccg 304
              |||| || ||||| ||||||||||||||||| ||||||||||||||||||| ||||| ||
Sbjct: 138675 cgccacggcgctcgccggggaccttgtacaggagcctgtcccccgccaccgtcatctgcg 138734

                                                                          
Query: 305    cgccgttgaacagcagcgtcacgcccggcagcctcgccgtcggcggagagcgcccctgcg 364
              ||||||||||||||||||| ||| | || ||||||||   |||||| | ||||||||| |
Sbjct: 138735 cgccgttgaacagcagcgtgacggcggggagcctcgc---cggcggcgcgcgcccctggg 138791

                                       
Query: 365    gcacgcggaagcaggtgtcgaacgc 389
              ||||||||||||| |||||||||||
Sbjct: 138792 gcacgcggaagcatgtgtcgaacgc 138816
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>ref|NM_190573.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1329

 Score =  416 bits (210), Expect = e-113
 Identities = 293/320 (91%), Gaps = 3/320 (0%)
 Strand = Plus / Minus

                                                                        
Query: 70   agcatgaggcctaggcgctggctggccacgtcgcagcggacgggcgcgagcccgacgcgg 129
            ||||| ||||| ||||||| |||||| ||||||||||||| ||||||||| |||||||||
Sbjct: 1325 agcatcaggccgaggcgctcgctggcgacgtcgcagcggatgggcgcgaggccgacgcgg 1266

                                                                        
Query: 130  ccgcgctccaggtcgtactccacccacacgttcatctggtggtggtgcccgatcacgtac 189
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1265 ccgcgctccaggtcgtactccacccacacgttcatctggtggtggtgcccgatcacgtac 1206

                                                                        
Query: 190  gccatgatgggcaccatgtccgcgtttccgaacgtcaggcaccacacgccgtcgccgccg 249
            ||  |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| 
Sbjct: 1205 gctgtgatgggcaccatgtccgcgttcccgaacgtgaggcaccacacgccgtcgccgcca 1146

                                                                        
Query: 250  cgccgctccccggggaccttgtacagcagcctgtcccccgccaccgccatctccgcgccg 309
            || ||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||||||
Sbjct: 1145 cggcgctcgccggggaccttgtacaggagcctgtcccccgccaccgtcatctgcgcgccg 1086

                                                                        
Query: 310  ttgaacagcagcgtcacgcccggcagcctcgccgtcggcggagagcgcccctgcggcacg 369
            |||||||||||||| ||| | || ||||||||   |||||| | ||||||||| ||||||
Sbjct: 1085 ttgaacagcagcgtgacggcggggagcctcgc---cggcggcgcgcgcccctggggcacg 1029

                                
Query: 370  cggaagcaggtgtcgaacgc 389
            |||||||| |||||||||||
Sbjct: 1028 cggaagcatgtgtcgaacgc 1009
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>gb|AY106687.1| Zea mays PCO083606 mRNA sequence
          Length = 397

 Score =  186 bits (94), Expect = 4e-44
 Identities = 136/150 (90%)
 Strand = Plus / Plus

                                                                       
Query: 64  cgtcagagcatgaggcctaggcgctggctggccacgtcgcagcggacgggcgcgagcccg 123
           ||||| ||||||||||| || |||| |||||| ||||||||   ||| ||||||||||||
Sbjct: 248 cgtcacagcatgaggccgagccgctcgctggcgacgtcgcacttgacaggcgcgagcccg 307

                                                                       
Query: 124 acgcggccgcgctccaggtcgtactccacccacacgttcatctggtggtggtgcccgatc 183
           |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 308 acgcggccgcgctccaggtcgtactcgacccacaggttcatctggtggtggtgcccgatc 367

                                         
Query: 184 acgtacgccatgatgggcaccatgtccgcg 213
           ||||||||| | | ||||||||||||||||
Sbjct: 368 acgtacgccgtcaggggcaccatgtccgcg 397
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>ref|NM_187511.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1344

 Score =  125 bits (63), Expect = 1e-25
 Identities = 132/155 (85%)
 Strand = Plus / Minus

                                                                        
Query: 82   aggcgctggctggccacgtcgcagcggacgggcgcgagcccgacgcggccgcgctccagg 141
            ||||||||| |||| | |||||||||  | |||||||  ||||||||||||  ||  |||
Sbjct: 1328 aggcgctgggtggcaaggtcgcagcgcgctggcgcgaagccgacgcggccgttctggagg 1269

                                                                        
Query: 142  tcgtactccacccacacgttcatctggtggtggtgcccgatcacgtacgccatgatgggc 201
            |||||||||||||||||||||  ||||||||||||||||||||||||||||   |||   
Sbjct: 1268 tcgtactccacccacacgttctgctggtggtggtgcccgatcacgtacgccgacatgccg 1209

                                               
Query: 202  accatgtccgcgtttccgaacgtcaggcaccacac 236
             ||||||||| ||| ||||||||||||||||||||
Sbjct: 1208 gccatgtccgagttgccgaacgtcaggcaccacac 1174



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 245  cgccgcgccgctccccggggaccttgtacagcagcctgtcccccgccaccgccatctccg 304
            ||||||||||||| || || ||| ||||||| ||| | ||||| | ||| |||| |||||
Sbjct: 1156 cgccgcgccgctcgcctggcaccatgtacaggagcttctccccggacacggccacctccg 1097

                 
Query: 305  cgccg 309
            |||||
Sbjct: 1096 cgccg 1092
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  125 bits (63), Expect = 1e-25
 Identities = 132/155 (85%)
 Strand = Plus / Minus

                                                                           
Query: 82      aggcgctggctggccacgtcgcagcggacgggcgcgagcccgacgcggccgcgctccagg 141
               ||||||||| |||| | |||||||||  | |||||||  ||||||||||||  ||  |||
Sbjct: 9070412 aggcgctgggtggcaaggtcgcagcgcgctggcgcgaagccgacgcggccgttctggagg 9070353

                                                                           
Query: 142     tcgtactccacccacacgttcatctggtggtggtgcccgatcacgtacgccatgatgggc 201
               |||||||||||||||||||||  ||||||||||||||||||||||||||||   |||   
Sbjct: 9070352 tcgtactccacccacacgttctgctggtggtggtgcccgatcacgtacgccgacatgccg 9070293

                                                  
Query: 202     accatgtccgcgtttccgaacgtcaggcaccacac 236
                ||||||||| ||| ||||||||||||||||||||
Sbjct: 9070292 gccatgtccgagttgccgaacgtcaggcaccacac 9070258



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 245     cgccgcgccgctccccggggaccttgtacagcagcctgtcccccgccaccgccatctccg 304
               ||||||||||||| || || ||| ||||||| ||| | ||||| | ||| |||| |||||
Sbjct: 9070240 cgccgcgccgctcgcctggcaccatgtacaggagcttctccccggacacggccacctccg 9070181

                    
Query: 305     cgccg 309
               |||||
Sbjct: 9070180 cgccg 9070176
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>gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1261C08,
             complete sequence
          Length = 99910

 Score =  125 bits (63), Expect = 1e-25
 Identities = 132/155 (85%)
 Strand = Plus / Minus

                                                                         
Query: 82    aggcgctggctggccacgtcgcagcggacgggcgcgagcccgacgcggccgcgctccagg 141
             ||||||||| |||| | |||||||||  | |||||||  ||||||||||||  ||  |||
Sbjct: 77448 aggcgctgggtggcaaggtcgcagcgcgctggcgcgaagccgacgcggccgttctggagg 77389

                                                                         
Query: 142   tcgtactccacccacacgttcatctggtggtggtgcccgatcacgtacgccatgatgggc 201
             |||||||||||||||||||||  ||||||||||||||||||||||||||||   |||   
Sbjct: 77388 tcgtactccacccacacgttctgctggtggtggtgcccgatcacgtacgccgacatgccg 77329

                                                
Query: 202   accatgtccgcgtttccgaacgtcaggcaccacac 236
              ||||||||| ||| ||||||||||||||||||||
Sbjct: 77328 gccatgtccgagttgccgaacgtcaggcaccacac 77294



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                         
Query: 245   cgccgcgccgctccccggggaccttgtacagcagcctgtcccccgccaccgccatctccg 304
             ||||||||||||| || || ||| ||||||| ||| | ||||| | ||| |||| |||||
Sbjct: 77276 cgccgcgccgctcgcctggcaccatgtacaggagcttctccccggacacggccacctccg 77217

                  
Query: 305   cgccg 309
             |||||
Sbjct: 77216 cgccg 77212
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>gb|AC134238.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0016G06, complete sequence
          Length = 119910

 Score =  125 bits (63), Expect = 1e-25
 Identities = 132/155 (85%)
 Strand = Plus / Minus

                                                                         
Query: 82    aggcgctggctggccacgtcgcagcggacgggcgcgagcccgacgcggccgcgctccagg 141
             ||||||||| |||| | |||||||||  | |||||||  ||||||||||||  ||  |||
Sbjct: 13592 aggcgctgggtggcaaggtcgcagcgcgctggcgcgaagccgacgcggccgttctggagg 13533

                                                                         
Query: 142   tcgtactccacccacacgttcatctggtggtggtgcccgatcacgtacgccatgatgggc 201
             |||||||||||||||||||||  ||||||||||||||||||||||||||||   |||   
Sbjct: 13532 tcgtactccacccacacgttctgctggtggtggtgcccgatcacgtacgccgacatgccg 13473

                                                
Query: 202   accatgtccgcgtttccgaacgtcaggcaccacac 236
              ||||||||| ||| ||||||||||||||||||||
Sbjct: 13472 gccatgtccgagttgccgaacgtcaggcaccacac 13438



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                         
Query: 245   cgccgcgccgctccccggggaccttgtacagcagcctgtcccccgccaccgccatctccg 304
             ||||||||||||| || || ||| ||||||| ||| | ||||| | ||| |||| |||||
Sbjct: 13420 cgccgcgccgctcgcctggcaccatgtacaggagcttctccccggacacggccacctccg 13361

                  
Query: 305   cgccg 309
             |||||
Sbjct: 13360 cgccg 13356
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  125 bits (63), Expect = 1e-25
 Identities = 132/155 (85%)
 Strand = Plus / Minus

                                                                           
Query: 82      aggcgctggctggccacgtcgcagcggacgggcgcgagcccgacgcggccgcgctccagg 141
               ||||||||| |||| | |||||||||  | |||||||  ||||||||||||  ||  |||
Sbjct: 9068245 aggcgctgggtggcaaggtcgcagcgcgctggcgcgaagccgacgcggccgttctggagg 9068186

                                                                           
Query: 142     tcgtactccacccacacgttcatctggtggtggtgcccgatcacgtacgccatgatgggc 201
               |||||||||||||||||||||  ||||||||||||||||||||||||||||   |||   
Sbjct: 9068185 tcgtactccacccacacgttctgctggtggtggtgcccgatcacgtacgccgacatgccg 9068126

                                                  
Query: 202     accatgtccgcgtttccgaacgtcaggcaccacac 236
                ||||||||| ||| ||||||||||||||||||||
Sbjct: 9068125 gccatgtccgagttgccgaacgtcaggcaccacac 9068091



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 245     cgccgcgccgctccccggggaccttgtacagcagcctgtcccccgccaccgccatctccg 304
               ||||||||||||| || || ||| ||||||| ||| | ||||| | ||| |||| |||||
Sbjct: 9068073 cgccgcgccgctcgcctggcaccatgtacaggagcttctccccggacacggccacctccg 9068014

                    
Query: 305     cgccg 309
               |||||
Sbjct: 9068013 cgccg 9068009
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>dbj|AK105994.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-H04, full
            insert sequence
          Length = 1735

 Score =  125 bits (63), Expect = 1e-25
 Identities = 132/155 (85%)
 Strand = Plus / Minus

                                                                        
Query: 82   aggcgctggctggccacgtcgcagcggacgggcgcgagcccgacgcggccgcgctccagg 141
            ||||||||| |||| | |||||||||  | |||||||  ||||||||||||  ||  |||
Sbjct: 1444 aggcgctgggtggcaaggtcgcagcgcgctggcgcgaagccgacgcggccgttctggagg 1385

                                                                        
Query: 142  tcgtactccacccacacgttcatctggtggtggtgcccgatcacgtacgccatgatgggc 201
            |||||||||||||||||||||  ||||||||||||||||||||||||||||   |||   
Sbjct: 1384 tcgtactccacccacacgttctgctggtggtggtgcccgatcacgtacgccgacatgccg 1325

                                               
Query: 202  accatgtccgcgtttccgaacgtcaggcaccacac 236
             ||||||||| ||| ||||||||||||||||||||
Sbjct: 1324 gccatgtccgagttgccgaacgtcaggcaccacac 1290



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 245  cgccgcgccgctccccggggaccttgtacagcagcctgtcccccgccaccgccatctccg 304
            ||||||||||||| || || ||| ||||||| ||| | ||||| | ||| |||| |||||
Sbjct: 1272 cgccgcgccgctcgcctggcaccatgtacaggagcttctccccggacacggccacctccg 1213

                 
Query: 305  cgccg 309
            |||||
Sbjct: 1212 cgccg 1208
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>dbj|AK103225.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123A19, full
            insert sequence
          Length = 1990

 Score =  125 bits (63), Expect = 1e-25
 Identities = 132/155 (85%)
 Strand = Plus / Minus

                                                                        
Query: 82   aggcgctggctggccacgtcgcagcggacgggcgcgagcccgacgcggccgcgctccagg 141
            ||||||||| |||| | |||||||||  | |||||||  ||||||||||||  ||  |||
Sbjct: 1705 aggcgctgggtggcaaggtcgcagcgcgctggcgcgaagccgacgcggccgttctggagg 1646

                                                                        
Query: 142  tcgtactccacccacacgttcatctggtggtggtgcccgatcacgtacgccatgatgggc 201
            |||||||||||||||||||||  ||||||||||||||||||||||||||||   |||   
Sbjct: 1645 tcgtactccacccacacgttctgctggtggtggtgcccgatcacgtacgccgacatgccg 1586

                                               
Query: 202  accatgtccgcgtttccgaacgtcaggcaccacac 236
             ||||||||| ||| ||||||||||||||||||||
Sbjct: 1585 gccatgtccgagttgccgaacgtcaggcaccacac 1551



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 245  cgccgcgccgctccccggggaccttgtacagcagcctgtcccccgccaccgccatctccg 304
            ||||||||||||| || || ||| ||||||| ||| | ||||| | ||| |||| |||||
Sbjct: 1533 cgccgcgccgctcgcctggcaccatgtacaggagcttctccccggacacggccacctccg 1474

                 
Query: 305  cgccg 309
            |||||
Sbjct: 1473 cgccg 1469
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>dbj|AK102985.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116C01, full
           insert sequence
          Length = 2012

 Score =  125 bits (63), Expect = 1e-25
 Identities = 132/155 (85%)
 Strand = Plus / Plus

                                                                       
Query: 82  aggcgctggctggccacgtcgcagcggacgggcgcgagcccgacgcggccgcgctccagg 141
           ||||||||| |||| | |||||||||  | |||||||  ||||||||||||  ||  |||
Sbjct: 136 aggcgctgggtggcaaggtcgcagcgcgctggcgcgaagccgacgcggccgttctggagg 195

                                                                       
Query: 142 tcgtactccacccacacgttcatctggtggtggtgcccgatcacgtacgccatgatgggc 201
           |||||||||||||||||||||  ||||||||||||||||||||||||||||   |||   
Sbjct: 196 tcgtactccacccacacgttctgctggtggtggtgcccgatcacgtacgccgacatgccg 255

                                              
Query: 202 accatgtccgcgtttccgaacgtcaggcaccacac 236
            ||||||||| ||| ||||||||||||||||||||
Sbjct: 256 gccatgtccgagttgccgaacgtcaggcaccacac 290



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 245 cgccgcgccgctccccggggaccttgtacagcagcctgtcccccgccaccgccatctccg 304
           ||||||||||||| || || ||| ||||||| ||| | ||||| | ||| |||| |||||
Sbjct: 308 cgccgcgccgctcgcctggcaccatgtacaggagcttctccccggacacggccacctccg 367

                
Query: 305 cgccg 309
           |||||
Sbjct: 368 cgccg 372
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>dbj|AK101206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030P16, full
            insert sequence
          Length = 1965

 Score =  125 bits (63), Expect = 1e-25
 Identities = 132/155 (85%)
 Strand = Plus / Minus

                                                                        
Query: 82   aggcgctggctggccacgtcgcagcggacgggcgcgagcccgacgcggccgcgctccagg 141
            ||||||||| |||| | |||||||||  | |||||||  ||||||||||||  ||  |||
Sbjct: 1738 aggcgctgggtggcaaggtcgcagcgcgctggcgcgaagccgacgcggccgttctggagg 1679

                                                                        
Query: 142  tcgtactccacccacacgttcatctggtggtggtgcccgatcacgtacgccatgatgggc 201
            |||||||||||||||||||||  ||||||||||||||||||||||||||||   |||   
Sbjct: 1678 tcgtactccacccacacgttctgctggtggtggtgcccgatcacgtacgccgacatgccg 1619

                                               
Query: 202  accatgtccgcgtttccgaacgtcaggcaccacac 236
             ||||||||| ||| ||||||||||||||||||||
Sbjct: 1618 gccatgtccgagttgccgaacgtcaggcaccacac 1584



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 245  cgccgcgccgctccccggggaccttgtacagcagcctgtcccccgccaccgccatctccg 304
            ||||||||||||| || || ||| ||||||| ||| | ||||| | ||| |||| |||||
Sbjct: 1566 cgccgcgccgctcgcctggcaccatgtacaggagcttctccccggacacggccacctccg 1507

                 
Query: 305  cgccg 309
            |||||
Sbjct: 1506 cgccg 1502
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>dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0506E04
          Length = 139934

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 329   ccggcagcctcgccgtcggcggag 352
             ||||||||||||||||||||||||
Sbjct: 80733 ccggcagcctcgccgtcggcggag 80710
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>ref|XM_480153.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 405

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 236 cgccgtcgccgccgcgccgctccccgggga 265
           ||||| ||||||||| ||||||||||||||
Sbjct: 379 cgccgccgccgccgcaccgctccccgggga 350
to top
>ref|XM_507134.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1066_B03.125
           mRNA
          Length = 3327

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 236 cgccgtcgccgccgcgccgctccccgggga 265
           ||||| ||||||||| ||||||||||||||
Sbjct: 138 cgccgccgccgccgcaccgctccccgggga 167
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>ref|XM_480154.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3327

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 236 cgccgtcgccgccgcgccgctccccgggga 265
           ||||| ||||||||| ||||||||||||||
Sbjct: 138 cgccgccgccgccgcaccgctccccgggga 167
to top
>ref|XM_479112.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1342

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 284 cccccgccaccgccatctccgcgccg 309
           ||||||||||||||||| ||||||||
Sbjct: 123 cccccgccaccgccatcgccgcgccg 148
to top
>gb|AY023208.1| Oryza sativa microsatellite MRG5533 containing (GCG)X9, closest to
           marker R2285, genomic sequence
          Length = 227

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 236 cgccgtcgccgccgcgccgctccccgggga 265
           ||||| ||||||||| ||||||||||||||
Sbjct: 115 cgccgccgccgccgcaccgctccccgggga 86
to top
>gb|AY184809.1| Oryza sativa (japonica cultivar-group) seed protein mRNA, complete
           cds
          Length = 813

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 284 cccccgccaccgccatctccgcgccg 309
           ||||||||||||||||| ||||||||
Sbjct: 119 cccccgccaccgccatcgccgcgccg 144
to top
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 92      tggccacgtcgcagcggacgggcgcg 117
               ||||| ||||||||||||||||||||
Sbjct: 1396412 tggcctcgtcgcagcggacgggcgcg 1396437
to top
>gb|AC079038.3|AC079038 Oryza sativa chromosome 7 clone OSJNBb0024A20, complete sequence
          Length = 129838

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 284   cccccgccaccgccatctccgcgccg 309
             ||||||||||||||||| ||||||||
Sbjct: 97259 cccccgccaccgccatcgccgcgccg 97234
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 236     cgccgtcgccgccgcgccgctccccgggga 265
               ||||| ||||||||| ||||||||||||||
Sbjct: 3130572 cgccgccgccgccgcaccgctccccgggga 3130601
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 284      cccccgccaccgccatctccgcgccg 309
                ||||||||||||||||| ||||||||
Sbjct: 24991894 cccccgccaccgccatcgccgcgccg 24991919



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 289      gccaccgccatctccgcgccg 309
                |||||||||||||||||||||
Sbjct: 25702956 gccaccgccatctccgcgccg 25702976



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 236     cgccgtcgccgccgcgccgc 255
               ||||||||||||||||||||
Sbjct: 2721532 cgccgtcgccgccgcgccgc 2721513
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>dbj|AP005895.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0018L13
          Length = 131155

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 284   cccccgccaccgccatctccgcgccg 309
             ||||||||||||||||| ||||||||
Sbjct: 32574 cccccgccaccgccatcgccgcgccg 32599
to top
>dbj|AP003940.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1066_B03
          Length = 115339

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 236   cgccgtcgccgccgcgccgctccccgggga 265
             ||||| ||||||||| ||||||||||||||
Sbjct: 90056 cgccgccgccgccgcaccgctccccgggga 90085
to top
>dbj|AK099134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050E19, full
           insert sequence
          Length = 3326

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 236 cgccgtcgccgccgcgccgctccccgggga 265
           ||||| ||||||||| ||||||||||||||
Sbjct: 138 cgccgccgccgccgcaccgctccccgggga 167
to top
>dbj|AK070325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050A13, full
           insert sequence
          Length = 3347

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 236 cgccgtcgccgccgcgccgctccccgggga 265
           ||||| ||||||||| ||||||||||||||
Sbjct: 158 cgccgccgccgccgcaccgctccccgggga 187
to top
>dbj|AK068639.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155J08, full
           insert sequence
          Length = 1342

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 284 cccccgccaccgccatctccgcgccg 309
           ||||||||||||||||| ||||||||
Sbjct: 123 cccccgccaccgccatcgccgcgccg 148
to top
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 88      tggctggccacgtcgcagcgg 108
               |||||||||||||||||||||
Sbjct: 4543332 tggctggccacgtcgcagcgg 4543312
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 113     gcgcgagcccgacgcggccgc 133
               |||||||||||||||||||||
Sbjct: 3383363 gcgcgagcccgacgcggccgc 3383343
to top
>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09,
              complete sequence
          Length = 167318

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 241    tcgccgccgcgccgctccccg 261
              |||||||||||||||||||||
Sbjct: 154810 tcgccgccgcgccgctccccg 154790
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 113    gcgcgagcccgacgcggccgc 133
              |||||||||||||||||||||
Sbjct: 422327 gcgcgagcccgacgcggccgc 422307
to top
>gb|AY596580.1| Saccharum officinarum clone SCCCCL3120B06, complete sequence
          Length = 1308

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 234  cacgccgtcgccgccgcgccg 254
            |||||||||||||||||||||
Sbjct: 1129 cacgccgtcgccgccgcgccg 1109
to top
>gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_E12,
             complete sequence
          Length = 121293

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 241   tcgccgccgcgccgctccccg 261
             |||||||||||||||||||||
Sbjct: 25605 tcgccgccgcgccgctccccg 25585
to top
>ref|XM_860264.1| PREDICTED: Canis familiaris similar to GGA-binding partner (p56
           accessory protein) (HSD8), transcript variant 3
           (LOC486622), mRNA
          Length = 1474

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 236 cgccgtcgccgccgcgccgctcccc 260
           ||||| |||||||||||||||||||
Sbjct: 160 cgccgccgccgccgcgccgctcccc 136
to top
>ref|XM_543748.2| PREDICTED: Canis familiaris similar to GGA-binding partner (p56
           accessory protein) (HSD8), transcript variant 1
           (LOC486622), mRNA
          Length = 2512

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 236 cgccgtcgccgccgcgccgctcccc 260
           ||||| |||||||||||||||||||
Sbjct: 160 cgccgccgccgccgcgccgctcccc 136
to top
>ref|XM_541174.2| PREDICTED: Canis familiaris similar to radial spokehead-like 2
           (LOC484057), mRNA
          Length = 2049

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 244 ccgccgcgccgctccccgggg 264
           |||||||||||||||||||||
Sbjct: 78  ccgccgcgccgctccccgggg 58
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 113    gcgcgagcccgacgcggccgc 133
              |||||||||||||||||||||
Sbjct: 232155 gcgcgagcccgacgcggccgc 232135
to top
>ref|XM_690223.1| PREDICTED: Danio rerio hypothetical protein LOC566937 (LOC566937),
           mRNA
          Length = 1572

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 237 gccgtcgccgccgcgccgctccccg 261
           |||| ||||||||||||||||||||
Sbjct: 335 gccgacgccgccgcgccgctccccg 311
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 241      tcgccgccgcgccgctccccg 261
                |||||||||||||||||||||
Sbjct: 17894856 tcgccgccgcgccgctccccg 17894836
to top
>gb|AF317886.1|AF317886 Burkholderia pseudomallei putative aldehyde dehydrogenase gene,
            partial cds; putative acyl-CoA dehydrogenase (aidB) gene,
            complete cds; and putative alcohol dehydrogenase gene,
            partial cds
          Length = 3436

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 113  gcgcgagcccgacgcggccgc 133
            |||||||||||||||||||||
Sbjct: 1268 gcgcgagcccgacgcggccgc 1248
to top
>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0524E08
          Length = 154696

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 289   gccaccgccatctccgcgccg 309
             |||||||||||||||||||||
Sbjct: 20118 gccaccgccatctccgcgccg 20138
to top
>dbj|AK100353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083G14, full
           insert sequence
          Length = 2942

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 241 tcgccgccgcgccgctccccg 261
           |||||||||||||||||||||
Sbjct: 22  tcgccgccgcgccgctccccg 42
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 113    gcgcgagcccgacgcggccgc 133
              |||||||||||||||||||||
Sbjct: 225306 gcgcgagcccgacgcggccgc 225286
to top
>ref|NM_184891.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1767

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 141 gtcgtactccacccacacgt 160
           ||||||||||||||||||||
Sbjct: 507 gtcgtactccacccacacgt 488
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>ref|XM_519468.1| PREDICTED: Pan troglodytes similar to Zinc finger protein 398 (Zinc
           finger DNA binding protein p52/p71) (LOC463826), mRNA
          Length = 1760

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 236 cgccgtcgccgccgcgccgc 255
           ||||||||||||||||||||
Sbjct: 43  cgccgtcgccgccgcgccgc 62
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>ref|NM_192981.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1572

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  cgccgccgcgccgctccccg 261
            ||||||||||||||||||||
Sbjct: 1123 cgccgccgcgccgctccccg 1104
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>ref|XM_476653.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1791

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  cgccgtcgccgccgcgccgc 255
            ||||||||||||||||||||
Sbjct: 1521 cgccgtcgccgccgcgccgc 1502
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>gb|AY368703.1| Manduca sexta N-acetylglucosaminidase mRNA, complete cds
          Length = 3008

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 130 ccgcgctccaggtcgtactccacc 153
           |||||||||||| |||||||||||
Sbjct: 914 ccgcgctccagggcgtactccacc 891
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>emb|AL607122.20| Human DNA sequence from clone RP11-511I2 on chromosome 1 Contains the
             3' end of the gene for UMP-CMP kinase (UMP-CMPK), a novel
             gene, the FOXE3 gene for forkhead box E3, a novel gene
             (MGC12982), the FOXD2 gene for forkhead box D2 and three
             CpG islands, complete sequence
          Length = 106239

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 153   ccacacgttcatctggtggtggtg 176
             |||||| |||||||||||||||||
Sbjct: 72307 ccacactttcatctggtggtggtg 72330
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>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16
          Length = 348942

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    acacgccgtcgccgccgcgc 252
              ||||||||||||||||||||
Sbjct: 245687 acacgccgtcgccgccgcgc 245706
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>gb|AC148926.4| Pan troglodytes BAC clone RP43-136P16 from chromosome 7, complete
              sequence
          Length = 178320

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    cgccgtcgccgccgcgccgc 255
              ||||||||||||||||||||
Sbjct: 126591 cgccgtcgccgccgcgccgc 126572
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 233     acacgccgtcgccgccgcgc 252
               ||||||||||||||||||||
Sbjct: 1364850 acacgccgtcgccgccgcgc 1364869
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 236      cgccgtcgccgccgcgccgc 255
                ||||||||||||||||||||
Sbjct: 21574644 cgccgtcgccgccgcgccgc 21574625



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 236      cgccgtcgccgccgcgccgctccc 259
                ||||| ||||||||||||||||||
Sbjct: 20934932 cgccgccgccgccgcgccgctccc 20934955
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>gb|AC156029.2| Mus musculus BAC clone RP23-42O8 from chromosome 5, complete sequence
          Length = 235471

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    cgagcccgacgcggccgcgc 135
              ||||||||||||||||||||
Sbjct: 231838 cgagcccgacgcggccgcgc 231819
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>gb|AF311321.1|AF311321 Sinorhizobium fredii ORF162 (orf162) gene, partial cds; and
           orotidine 5'-monophosphate decarboxylase (pyrF) gene,
           complete cds
          Length = 1511

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 290 ccaccgccatctccgcgccg 309
           ||||||||||||||||||||
Sbjct: 916 ccaccgccatctccgcgccg 897
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 236     cgccgtcgccgccgcgccgc 255
               ||||||||||||||||||||
Sbjct: 5537664 cgccgtcgccgccgcgccgc 5537645
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>gb|AC145857.3| Pan troglodytes BAC clone RP43-6D4 from chromosome 7, complete sequence
          Length = 208516

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    cgccgtcgccgccgcgccgc 255
              ||||||||||||||||||||
Sbjct: 204569 cgccgtcgccgccgcgccgc 204550
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>gb|AF274566.1|AF274566 Schizophyllum commune intermediate peptidase gene, partial cds; mating
             type protein A-alpha Z6 and mating type protein A-alpha Y6
             genes, complete cds; and X6 gene, partial cds
          Length = 10155

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   tccacccacacgttcatctg 167
             ||||||||||||||||||||
Sbjct: 10151 tccacccacacgttcatctg 10132
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 304     gcgccgttgaacagcagcgt 323
               ||||||||||||||||||||
Sbjct: 3430393 gcgccgttgaacagcagcgt 3430412
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>dbj|AP003546.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0672C09
          Length = 145655

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  cgccgccgcgccgctccccg 261
            ||||||||||||||||||||
Sbjct: 6331 cgccgccgcgccgctccccg 6312
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>dbj|AP002908.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0013G02
          Length = 163419

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   cgccgccgcgccgctccccg 261
             ||||||||||||||||||||
Sbjct: 79463 cgccgccgcgccgctccccg 79444
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>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1364A02
          Length = 137933

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   cgccgtcgccgccgcgccgc 255
             ||||||||||||||||||||
Sbjct: 25093 cgccgtcgccgccgcgccgc 25074
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>dbj|AK111466.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-D06, full
           insert sequence
          Length = 1409

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 242 cgccgccgcgccgctccccg 261
           ||||||||||||||||||||
Sbjct: 881 cgccgccgcgccgctccccg 862
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>dbj|AK109551.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-A03, full
           insert sequence
          Length = 1325

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 236 cgccgtcgccgccgcgccgctccc 259
           ||||| ||||||||||||||||||
Sbjct: 405 cgccgccgccgccgcgccgctccc 382
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>dbj|AP003704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1048_C10
          Length = 99194

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   cgccgtcgccgccgcgccgc 255
             ||||||||||||||||||||
Sbjct: 28543 cgccgtcgccgccgcgccgc 28524
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>gb|AY105912.1| Zea mays PCO095569 mRNA sequence
          Length = 1283

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 acgccgtcgccgccgcgccg 254
           ||||||||||||||||||||
Sbjct: 219 acgccgtcgccgccgcgccg 238
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>tpe|BN000667.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx138 gene
           for class III peroxidase 138 precursor, exons 1-4
          Length = 9140

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 236 cgccgtcgccgccgcgccgctccc 259
           ||||| ||||||||||||||||||
Sbjct: 393 cgccgccgccgccgcgccgctccc 370
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>dbj|AP003499.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-178H8, complete
            sequence
          Length = 193227

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 236  cgccgtcgccgccgcgccgctccc 259
            ||||| ||||||||||||||||||
Sbjct: 6111 cgccgccgccgccgcgccgctccc 6134
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 228     gcaccacacgccgtcgccgc 247
               ||||||||||||||||||||
Sbjct: 3206422 gcaccacacgccgtcgccgc 3206403
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 236      cgccgtcgccgccgcgccgc 255
                ||||||||||||||||||||
Sbjct: 21502965 cgccgtcgccgccgcgccgc 21502946



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 236      cgccgtcgccgccgcgccgctccc 259
                ||||| ||||||||||||||||||
Sbjct: 20861140 cgccgccgccgccgcgccgctccc 20861163
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>emb|AL844497.4|CNS08CAU Oryza sativa chromosome 12, . BAC OSJNBa0085B23 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 158019

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   cgccgtcgccgccgcgccgc 255
             ||||||||||||||||||||
Sbjct: 71245 cgccgtcgccgccgcgccgc 71264
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>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 182172

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 236   cgccgtcgccgccgcgccgctccc 259
             ||||| ||||||||||||||||||
Sbjct: 20416 cgccgccgccgccgcgccgctccc 20439
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>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 107819

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 236   cgccgtcgccgccgcgccgctccc 259
             ||||| ||||||||||||||||||
Sbjct: 24063 cgccgccgccgccgcgccgctccc 24040
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>gb|AC112263.4| Mus musculus BAC clone RP23-403P24 from 5, complete sequence
          Length = 189091

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    cgagcccgacgcggccgcgc 135
              ||||||||||||||||||||
Sbjct: 172348 cgagcccgacgcggccgcgc 172367
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>gb|U13942.1|SCU13942 Schizophyllum commune UVM9-1 A-alpha X1 gene, complete cds
          Length = 3101

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 148  tccacccacacgttcatctg 167
            ||||||||||||||||||||
Sbjct: 1312 tccacccacacgttcatctg 1331
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>gb|L43135.1|MTBPPQEF Methylobacterium extorquens putative proteases (pqqE, pqqF) and
            ORF219 genes, complete cds's, dioxygenase (ORF88') gene,
            5' end of cds
          Length = 4256

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 166  tggtggtggtgcccgatcac 185
            ||||||||||||||||||||
Sbjct: 1216 tggtggtggtgcccgatcac 1235


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,971,680
Number of Sequences: 3902068
Number of extensions: 2971680
Number of successful extensions: 90983
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87415
Number of HSP's gapped (non-prelim): 3564
length of query: 392
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 370
effective length of database: 17,147,199,772
effective search space: 6344463915640
effective search space used: 6344463915640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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