>THI42_MAIZE (Q41739) Thiazole biosynthetic enzyme 1-2, chloroplast precursor|
          Length = 354

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 23/40 (57%), Positives = 31/40 (77%)
 Frame = -3

Query: 254 LALKALGRPNGIDGTLKNVTPALHPEMILAASNNADIVDA 135
           LALKALGRPN +DGT+  V+PAL  E ++ AS + ++VDA
Sbjct: 316 LALKALGRPNAVDGTIPEVSPALREEFVI-ASKDDEVVDA 354

>THI4_ARATH (Q38814) Thiazole biosynthetic enzyme, chloroplast precursor (ARA6)|
          Length = 349

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 24/40 (60%), Positives = 30/40 (75%)
 Frame = -3

Query: 254 LALKALGRPNGIDGTLKNVTPALHPEMILAASNNADIVDA 135
           LALKALG PN IDGTL      L PE++LAA+++A+ VDA
Sbjct: 313 LALKALGLPNAIDGTL---VGNLSPELVLAAADSAETVDA 349

>THI4_ALNGL (Q38709) Thiazole biosynthetic enzyme, chloroplast precursor (AG6)|
          Length = 352

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 22/40 (55%), Positives = 30/40 (75%)
 Frame = -3

Query: 254 LALKALGRPNGIDGTLKNVTPALHPEMILAASNNADIVDA 135
           LALKALG PN +DG+       +HPE+ILAA+++A+I DA
Sbjct: 316 LALKALGLPNALDGSYVG---GIHPELILAAADSAEIADA 352

>THI4_CITSI (O23787) Thiazole biosynthetic enzyme, chloroplast precursor|
          Length = 356

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 21/40 (52%), Positives = 30/40 (75%)
 Frame = -3

Query: 254 LALKALGRPNGIDGTLKNVTPALHPEMILAASNNADIVDA 135
           LALK+LG+PN +DGT       +HPE+ILAA+++A+  DA
Sbjct: 320 LALKSLGQPNALDGT---YVGGVHPELILAAADSAETADA 356

>THI41_MAIZE (Q41738) Thiazole biosynthetic enzyme 1-1, chloroplast precursor|
          Length = 354

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 20/40 (50%), Positives = 30/40 (75%)
 Frame = -3

Query: 254 LALKALGRPNGIDGTLKNVTPALHPEMILAASNNADIVDA 135
           LALKALGRPN +DGT+   +P L  E+++A  ++ ++VDA
Sbjct: 319 LALKALGRPNAVDGTM---SPPLREELMIAYKDD-EVVDA 354

>PRIM_SYNP7 (P74893) DNA primase (EC 2.7.7.-)|
          Length = 694

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 13/20 (65%), Positives = 13/20 (65%)
 Frame = -3

Query: 197 TPALHPEMILAASNNADIVD 138
           TP LHPE I A    ADIVD
Sbjct: 3   TPRLHPETIAAVKERADIVD 22


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,265,391
Number of Sequences: 219361
Number of extensions: 455509
Number of successful extensions: 1181
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 80,573,946
effective HSP length: 60
effective length of database: 67,412,286
effective search space used: 1617894864
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)