| Clone Name | rbaet31d03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | emb|AL627248.7| Zebrafish DNA sequence from clone RP71-1G18 in l... | 40 | 3.8 | 2 | emb|BX470117.7| Zebrafish DNA sequence from clone CH211-204N10 i... | 40 | 3.8 |
|---|
>emb|AL627248.7| Zebrafish DNA sequence from clone RP71-1G18 in linkage group 2 Contains three novel genes, a novel gene similar to human CASQ1 (calsequestrin 1), six novel genes similar to vertebrate C1Q (gliacolin), a novel gene similar to human HNRPC (heterogeneous nuclear ribonucleoprotein C (C1/C2)), a novel gene for a protein similar to human H326 protein, two novel genes for proteins similar to human apolipoproteins, a novel gene similar to human TEP1 (telomerase-associated protein 1) and a CpG island, complete sequence Length = 143586 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 atccagcaggtccatattat 162 |||||||||||||||||||| Sbjct: 122476 atccagcaggtccatattat 122457
>emb|BX470117.7| Zebrafish DNA sequence from clone CH211-204N10 in linkage group 19, complete sequence Length = 169993 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aatgtactgtagttgcttcg 203 |||||||||||||||||||| Sbjct: 60703 aatgtactgtagttgcttcg 60684 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,887,145 Number of Sequences: 3902068 Number of extensions: 1887145 Number of successful extensions: 32701 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 32698 Number of HSP's gapped (non-prelim): 3 length of query: 287 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 265 effective length of database: 17,147,199,772 effective search space: 4544007939580 effective search space used: 4544007939580 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)