Clone Name	rbaet31c09
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|S68729.1| LHC Ib-20=light-harvesting complex I [Hordeum vulga...	622	e-175
2	gb|AF287276.1|AF287276 Hordeum vulgare chlorophyll a/b-binding p...	363	3e-97
3	ref|XM_482572.1| Oryza sativa (japonica cultivar-group), mRNA	204	2e-49
4	ref|XM_507585.1| PREDICTED Oryza sativa (japonica cultivar-group...	204	2e-49
5	ref|XM_507584.1| PREDICTED Oryza sativa (japonica cultivar-group...	204	2e-49
6	ref|XM_507583.1| PREDICTED Oryza sativa (japonica cultivar-group...	204	2e-49
7	ref|XM_507582.1| PREDICTED Oryza sativa (japonica cultivar-group...	204	2e-49
8	ref|XM_507239.2| PREDICTED Oryza sativa (japonica cultivar-group...	204	2e-49
9	gb|AY445626.2| Oryza sativa (japonica cultivar-group) chlorophyl...	204	2e-49
10	dbj|AK104499.1| Oryza sativa (japonica cultivar-group) cDNA clon...	204	2e-49
11	dbj|AK104416.1| Oryza sativa (japonica cultivar-group) cDNA clon...	204	2e-49
12	dbj|AK103921.1| Oryza sativa (japonica cultivar-group) cDNA clon...	204	2e-49
13	dbj|AK067809.1| Oryza sativa (japonica cultivar-group) cDNA clon...	204	2e-49
14	dbj|AK067712.1| Oryza sativa (japonica cultivar-group) cDNA clon...	204	2e-49
15	dbj|AK060222.1| Oryza sativa (japonica cultivar-group) cDNA clon...	204	2e-49
16	gb|AF094775.1|AF094775 Oryza sativa chlorophyll a/b-binding prot...	204	2e-49
17	ref|XM_482573.1| Oryza sativa (japonica cultivar-group), mRNA	178	9e-42
18	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	147	3e-32
19	dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic D...	147	3e-32
20	emb|X57706.1|LECAB11 L.esculentum DNA for CAB11 gene	78	2e-11
21	emb|Z17226.1|PSLHCA411 Pinus sylvestris Lhca4*1-1 gene encoding ...	72	1e-09
22	emb|Z16409.1|PSLHCA412 P.sylvestris Lhca4*1-2 mRNA encoding Lhca...	72	1e-09
23	emb|AJ579711.2|BVU579711 Beta vulgaris mRNA for chloroplast chlo...	66	9e-08
24	gb|BC002118.1| Mus musculus cDNA clone MGC:6623 IMAGE:3491066, c...	66	9e-08
25	gb|AY233205.1| Vitis vinifera chlorophyll a/b-binding protein (L...	60	6e-06
26	emb|AJ309094.1|PPI309094 Pinus pinaster mRNA for putative chloro...	56	9e-05
27	gb|AY109341.1| Zea mays CL4601_3 mRNA sequence	48	0.022
28	gb|AC019013.2|AC019013 Genomic Sequence For Arabidopsis thaliana...	46	0.085
29	emb|X82497.1|NTCAG4 N.tabacum mRNA for light-harvesting Ch1 a/b ...	44	0.34
30	ref|NM_114615.3| Arabidopsis thaliana CAB4; chlorophyll binding ...	42	1.3
31	gb|BT015429.1| Arabidopsis thaliana At3g47470 mRNA sequence	42	1.3
32	gb|AC007852.9| Drosophila melanogaster clone BACR33A10, complete...	42	1.3
33	gb|AC007588.5| Drosophila melanogaster clone BACR30O03, complete...	42	1.3
34	gb|BT000093.1| Arabidopsis thaliana chlorophyll A-B binding prot...	42	1.3
35	gb|BC036687.1| Homo sapiens cDNA clone IMAGE:5259465	42	1.3
36	gb|AY093080.1| Arabidopsis thaliana chlorophyll A-B binding prot...	42	1.3
37	gb|AC159237.2| Mus musculus BAC clone RP24-464G10 from chromosom...	42	1.3
38	gb|AF325012.2|AF325012 Arabidopsis thaliana AT3g47470 (AT3g47470...	42	1.3
39	gb|AC090883.1|AC090883 Homo sapiens chromosome 3 clone RP11-117G...	42	1.3
40	emb|BX824775.1|CNS0A6UB Arabidopsis thaliana Full-length cDNA Co...	42	1.3
41	emb|BX826089.1|CNS0A6C9 Arabidopsis thaliana Full-length cDNA Co...	42	1.3
42	emb|BX823268.1|CNS0A6MH Arabidopsis thaliana Full-length cDNA Co...	42	1.3
43	gb|AF276663.1|AF276663 Drosophila melanogaster comb (cg) gene, c...	42	1.3
44	gb|AY086470.1| Arabidopsis thaliana clone 2531 mRNA, complete se...	42	1.3
45	gb|AC027125.5| Homo sapiens chromosome 3 clone RP11-584M7 map 3p...	42	1.3
46	dbj|AK027185.1| Homo sapiens cDNA: FLJ23532 fis, clone LNG06911	42	1.3
47	emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl...	42	1.3
48	gb|AE003815.4| Drosophila melanogaster chromosome 2R, section 35...	42	1.3
49	gb|AC127582.4| Mus musculus BAC clone RP24-89J3 from 12, complet...	42	1.3
50	gb|M63931.1|ATHCABM Arabidopsis thaliana light-harvesting chloro...	42	1.3
51	ref|NM_188089.1| Oryza sativa (japonica cultivar-group), Ozsa852...	40	5.3
52	ref|XM_415827.1| PREDICTED: Gallus gallus similar to myosin 18A ...	40	5.3
53	emb|AL133520.5| Human DNA sequence from clone RP1-101A2 on chrom...	40	5.3
54	gb|AC024608.4| Mus musculus strain C57BL6/J chromosome 5 clone R...	40	5.3
55	ref|XM_535195.2| PREDICTED: Canis familiaris similar to inter-al...	40	5.3
56	gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome	40	5.3
57	gb|AF448525.1| Mytilus galloprovincialis precollagen-P mRNA, com...	40	5.3
58	emb|BX469902.7| Zebrafish DNA sequence from clone CH211-277G23 i...	40	5.3
59	dbj|AB189167.1| Oryza sativa (japonica cultivar-group) OsIDHa mR...	40	5.3
60	gb|S68728.1| LHC Ib-21=light-harvesting complex I [Hordeum vulga...	40	5.3
61	dbj|AK045799.1| Mus musculus adult male corpora quadrigemina cDN...	40	5.3
62	gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g...	40	5.3
63	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	40	5.3
64	gb|AC097525.3| Homo sapiens BAC clone RP11-627E8 from 2, complet...	40	5.3
65	dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic D...	40	5.3
66	dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome	40	5.3
67	gb|AF218305.1|AF218305 Hordeum vulgare chlorophyll a/b binding p...	40	5.3
68	dbj|AK059596.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	5.3
69	gb|AF082100.1|AF082100 Streptomyces sp. MA6548 FK506 peptide syn...	40	5.3
70	emb|AL645731.8| Mouse DNA sequence from clone RP23-423G13 on chr...	40	5.3

---

>gb|S68729.1| LHC Ib-20=light-harvesting complex I [Hordeum vulgare=barley,
           Prato, mRNA Chloroplast, 939 nt]
          Length = 939

 Score =  622 bits (314), Expect = e-175
 Identities = 375/391 (95%), Gaps = 12/391 (3%)
 Strand = Plus / Minus

                                                                       
Query: 5   aacacgcatgggtg-atattacaagtacagcctccgtcggaagccatgggcgaatccaca 63
           |||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 892 aacacgcatgggtatatattacaagtacagc-tccgtcggaagccatgggcgaatccaca 834

                                                                       
Query: 64  aggacaaagtttcaccaccggaactttaagattacaacacgtttttgcactgccacctac 123
           ||||||||||||||||||||||||      ||||||||||||||||||||||||||||||
Sbjct: 833 aggacaaagtttcaccaccggaac------attacaacacgtttttgcactgccacctac 780

                                                                       
Query: 124 tcctccacactttgtacatcctcagcaccccaaaataataattcagaccacctgaaacct 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 779 tcctccacactttgtacatcctcagcaccccaaaataataattcagaccacct-aaacct 721

                                                                       
Query: 184 ccttggtcggtgaaatcgacggatttattggccggagatggtctggatgatggtgttgtg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ccttggtcggtgaaatcgacggatttattggccggagatggtctggatgatggtgttgtg 661

                                                                       
Query: 244 ccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtcacgttgtg 303
           |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 660 ccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccgtgcacgttgtg 601

                                                                       
Query: 304 ctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagctccttctc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagctccttctc 541

                                          
Query: 364 cctgttctcgagggtgggggcgaagttgagg 394
           | ||||||||||   ||||||||||||||||
Sbjct: 540 cttgttctcgag---gggggcgaagttgagg 513

---

>gb|AF287276.1|AF287276 Hordeum vulgare chlorophyll a/b-binding protein precursor (Lhca4)
           mRNA, partial cds; nuclear gene for chloroplast product
          Length = 687

 Score =  363 bits (183), Expect = 3e-97
 Identities = 186/187 (99%)
 Strand = Plus / Minus

                                                                       
Query: 208 ttattggccggagatggtctggatgatggtgttgtgccatgggtcggccaggtgctgctg 267
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ttattggccggagatggtctggatgatggtgttgtgccatgggtcggccaggtgctgctg 628

                                                                       
Query: 268 caggttctcgaacggccccttcccggtcacgttgtgctgcaccaggaaccccaggaacgc 327
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 caggttctcgaacggccccttcccggtcacgttgtgctgcaccaggaaccccaggaacgc 568

                                                                       
Query: 328 cagcatggccagtctcccgttggcgagctccttctccctgttctcgagggtgggggcgaa 387
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 567 cagcatggccagtctcccgttggcgagctccttctccttgttctcgagggtgggggcgaa 508

                  
Query: 388 gttgagg 394
           |||||||
Sbjct: 507 gttgagg 501

---

>ref|XM_482572.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1070

 Score =  204 bits (103), Expect = 2e-49
 Identities = 154/171 (90%)
 Strand = Plus / Minus

                                                                       
Query: 224 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 283
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 787 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 728

                                                                       
Query: 284 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 343
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 727 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 668

                                                              
Query: 344 ccgttggcgagctccttctccctgttctcgagggtgggggcgaagttgagg 394
           ||||||||||||||||||||| ||  ||||||||||||  |||||||||||
Sbjct: 667 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagg 617

---

>ref|XM_507585.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA
          Length = 1138

 Score =  204 bits (103), Expect = 2e-49
 Identities = 154/171 (90%)
 Strand = Plus / Minus

                                                                       
Query: 224 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 283
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 791 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 732

                                                                       
Query: 284 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 343
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 731 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 672

                                                              
Query: 344 ccgttggcgagctccttctccctgttctcgagggtgggggcgaagttgagg 394
           ||||||||||||||||||||| ||  ||||||||||||  |||||||||||
Sbjct: 671 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagg 621

---

>ref|XM_507584.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA
          Length = 1138

 Score =  204 bits (103), Expect = 2e-49
 Identities = 154/171 (90%)
 Strand = Plus / Minus

                                                                       
Query: 224 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 283
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 791 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 732

                                                                       
Query: 284 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 343
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 731 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 672

                                                              
Query: 344 ccgttggcgagctccttctccctgttctcgagggtgggggcgaagttgagg 394
           ||||||||||||||||||||| ||  ||||||||||||  |||||||||||
Sbjct: 671 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagg 621

---

>ref|XM_507583.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA
          Length = 1178

 Score =  204 bits (103), Expect = 2e-49
 Identities = 154/171 (90%)
 Strand = Plus / Minus

                                                                       
Query: 224 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 283
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 788 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 729

                                                                       
Query: 284 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 343
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 728 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 669

                                                              
Query: 344 ccgttggcgagctccttctccctgttctcgagggtgggggcgaagttgagg 394
           ||||||||||||||||||||| ||  ||||||||||||  |||||||||||
Sbjct: 668 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagg 618

---

>ref|XM_507582.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA
          Length = 1188

 Score =  204 bits (103), Expect = 2e-49
 Identities = 154/171 (90%)
 Strand = Plus / Minus

                                                                       
Query: 224 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 283
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 787 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 728

                                                                       
Query: 284 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 343
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 727 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 668

                                                              
Query: 344 ccgttggcgagctccttctccctgttctcgagggtgggggcgaagttgagg 394
           ||||||||||||||||||||| ||  ||||||||||||  |||||||||||
Sbjct: 667 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagg 617

---

>ref|XM_507239.2| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA
          Length = 1191

 Score =  204 bits (103), Expect = 2e-49
 Identities = 154/171 (90%)
 Strand = Plus / Minus

                                                                       
Query: 224 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 283
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 790 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 731

                                                                       
Query: 284 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 343
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 730 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 671

                                                              
Query: 344 ccgttggcgagctccttctccctgttctcgagggtgggggcgaagttgagg 394
           ||||||||||||||||||||| ||  ||||||||||||  |||||||||||
Sbjct: 670 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagg 620

---

>gb|AY445626.2| Oryza sativa (japonica cultivar-group) chlorophyll a/b binding
           protein presusor mRNA, complete cds; nuclear gene for
           chloroplast product
          Length = 1128

 Score =  204 bits (103), Expect = 2e-49
 Identities = 154/171 (90%)
 Strand = Plus / Minus

                                                                       
Query: 224 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 283
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 767 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 708

                                                                       
Query: 284 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 343
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 707 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 648

                                                              
Query: 344 ccgttggcgagctccttctccctgttctcgagggtgggggcgaagttgagg 394
           ||||||||||||||||||||| ||  ||||||||||||  |||||||||||
Sbjct: 647 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagg 597

---

>dbj|AK104499.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E04, full
           insert sequence
          Length = 1140

 Score =  204 bits (103), Expect = 2e-49
 Identities = 154/171 (90%)
 Strand = Plus / Minus

                                                                       
Query: 224 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 283
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 791 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 732

                                                                       
Query: 284 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 343
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 731 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 672

                                                              
Query: 344 ccgttggcgagctccttctccctgttctcgagggtgggggcgaagttgagg 394
           ||||||||||||||||||||| ||  ||||||||||||  |||||||||||
Sbjct: 671 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagg 621

---

>dbj|AK104416.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G03, full
           insert sequence
          Length = 1177

 Score =  204 bits (103), Expect = 2e-49
 Identities = 154/171 (90%)
 Strand = Plus / Minus

                                                                       
Query: 224 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 283
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 788 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 729

                                                                       
Query: 284 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 343
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 728 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 669

                                                              
Query: 344 ccgttggcgagctccttctccctgttctcgagggtgggggcgaagttgagg 394
           ||||||||||||||||||||| ||  ||||||||||||  |||||||||||
Sbjct: 668 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagg 618

---

>dbj|AK103921.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B07, full
           insert sequence
          Length = 1193

 Score =  204 bits (103), Expect = 2e-49
 Identities = 154/171 (90%)
 Strand = Plus / Minus

                                                                       
Query: 224 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 283
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 792 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 733

                                                                       
Query: 284 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 343
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 732 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 673

                                                              
Query: 344 ccgttggcgagctccttctccctgttctcgagggtgggggcgaagttgagg 394
           ||||||||||||||||||||| ||  ||||||||||||  |||||||||||
Sbjct: 672 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagg 622

---

>dbj|AK067809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121A03, full
           insert sequence
          Length = 1190

 Score =  204 bits (103), Expect = 2e-49
 Identities = 154/171 (90%)
 Strand = Plus / Minus

                                                                       
Query: 224 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 283
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 789 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 730

                                                                       
Query: 284 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 343
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 729 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 670

                                                              
Query: 344 ccgttggcgagctccttctccctgttctcgagggtgggggcgaagttgagg 394
           ||||||||||||||||||||| ||  ||||||||||||  |||||||||||
Sbjct: 669 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagg 619

---

>dbj|AK067712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120A20, full
           insert sequence
          Length = 1138

 Score =  204 bits (103), Expect = 2e-49
 Identities = 154/171 (90%)
 Strand = Plus / Minus

                                                                       
Query: 224 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 283
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 791 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 732

                                                                       
Query: 284 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 343
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 731 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 672

                                                              
Query: 344 ccgttggcgagctccttctccctgttctcgagggtgggggcgaagttgagg 394
           ||||||||||||||||||||| ||  ||||||||||||  |||||||||||
Sbjct: 671 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagg 621

---

>dbj|AK060222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F08, full
           insert sequence
          Length = 1078

 Score =  204 bits (103), Expect = 2e-49
 Identities = 154/171 (90%)
 Strand = Plus / Minus

                                                                       
Query: 224 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 283
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 796 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 737

                                                                       
Query: 284 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 343
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 736 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 677

                                                              
Query: 344 ccgttggcgagctccttctccctgttctcgagggtgggggcgaagttgagg 394
           ||||||||||||||||||||| ||  ||||||||||||  |||||||||||
Sbjct: 676 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagg 626

---

>gb|AF094775.1|AF094775 Oryza sativa chlorophyll a/b-binding protein presursor (Cab27)
           mRNA, nuclear gene encoding chloroplast protein,
           complete cds
          Length = 1162

 Score =  204 bits (103), Expect = 2e-49
 Identities = 154/171 (90%)
 Strand = Plus / Minus

                                                                       
Query: 224 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 283
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 754 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 695

                                                                       
Query: 284 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 343
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 694 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 635

                                                              
Query: 344 ccgttggcgagctccttctccctgttctcgagggtgggggcgaagttgagg 394
           ||||||||||||||||||||| ||  ||||||||||||  |||||||||||
Sbjct: 634 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagg 584

---

>ref|XM_482573.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 576

 Score =  178 bits (90), Expect = 9e-42
 Identities = 148/166 (89%), Gaps = 1/166 (0%)
 Strand = Plus / Plus

                                                                       
Query: 230 atgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttc 289
           ||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||||||||
Sbjct: 1   atgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggccccttc 60

                                                                       
Query: 290 ccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctccc-gtt 348
              |||||||||||||||||||||||||||| |||||||||||| ||||| ||||| |||
Sbjct: 61  tgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctccctgtt 120

                                                         
Query: 349 ggcgagctccttctccctgttctcgagggtgggggcgaagttgagg 394
           |||||||||||||||| ||  ||||||||||||  |||||||||||
Sbjct: 121 ggcgagctccttctccttggcctcgagggtgggctcgaagttgagg 166

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  147 bits (74), Expect = 3e-32
 Identities = 110/122 (90%)
 Strand = Plus / Plus

                                                                            
Query: 224      gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 283
                ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 21164438 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 21164497

                                                                            
Query: 284      cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 343
                ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 21164498 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 21164557

                  
Query: 344      cc 345
                ||
Sbjct: 21164558 cc 21164559



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                   
Query: 344      ccgttggcgagctccttctccctgttctcgagggtgggggcgaagttgagg 394
                ||||||||||||||||||||| ||  ||||||||||||  |||||||||||
Sbjct: 21164651 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagg 21164701

---

>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0413H11
          Length = 147655

 Score =  147 bits (74), Expect = 3e-32
 Identities = 110/122 (90%)
 Strand = Plus / Plus

                                                                          
Query: 224    gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 283
              ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 135648 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 135707

                                                                          
Query: 284    cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 343
              ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 135708 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 135767

                
Query: 344    cc 345
              ||
Sbjct: 135768 cc 135769



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                 
Query: 344    ccgttggcgagctccttctccctgttctcgagggtgggggcgaagttgagg 394
              ||||||||||||||||||||| ||  ||||||||||||  |||||||||||
Sbjct: 135861 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagg 135911

---

>emb|X57706.1|LECAB11 L.esculentum DNA for CAB11 gene
          Length = 1393

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                        
Query: 227  tggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggcccc 286
            |||||||||||||||||||||||||| |  ||||||||| | ||||| || || || |||
Sbjct: 1192 tggatgatggtgttgtgccatgggtcagagaggtgctgcagaaggttgtcaaaaggtccc 1133

                                   
Query: 287  ttcccggtcacgttgtgctgcac 309
            ||||| ||||| |||||||||||
Sbjct: 1132 ttcccagtcacattgtgctgcac 1110

---

>emb|Z17226.1|PSLHCA411 Pinus sylvestris Lhca4*1-1 gene encoding Lhca4 protein (type 4
           protein of light-harvesting complex of photosystem I)
          Length = 1013

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 108/132 (81%)
 Strand = Plus / Minus

                                                                       
Query: 233 atggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccg 292
           ||||||||||||||||| || | ||| || ||| ||| ||| |||||||| ||||| || 
Sbjct: 735 atggtgttgtgccatggatcagacagatgttgcagcaagttgtcgaacgggccctttcct 676

                                                                       
Query: 293 gtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcg 352
           || || ||||| ||||| |  || |||||||| || | ||| |||| |||||| ||||||
Sbjct: 675 gttacattgtgttgcactacaaatcccaggaatgctaacattgccaatctcccattggcg 616

                       
Query: 353 agctccttctcc 364
           ||||||||||||
Sbjct: 615 agctccttctcc 604

---

>emb|Z16409.1|PSLHCA412 P.sylvestris Lhca4*1-2 mRNA encoding Lhca4 protein (type 4 protein
           of light-harvesting complex of photosystem I) (partial)
          Length = 968

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 108/132 (81%)
 Strand = Plus / Minus

                                                                       
Query: 233 atggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccg 292
           ||||||||||||||||| || | ||| || ||| ||| ||| |||||||| ||||| || 
Sbjct: 712 atggtgttgtgccatggatcagacagatgttgcagcaagttgtcgaacgggccctttcct 653

                                                                       
Query: 293 gtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcg 352
           || || ||||| ||||| |  || |||||||| || | ||| |||| |||||| ||||||
Sbjct: 652 gttacattgtgttgcactacaaatcccaggaatgctaacattgccaatctcccattggcg 593

                       
Query: 353 agctccttctcc 364
           ||||||||||||
Sbjct: 592 agctccttctcc 581

---

>emb|AJ579711.2|BVU579711 Beta vulgaris mRNA for chloroplast chlorophyll a/b binding protein
           (cab11 gene)
          Length = 1062

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 114/141 (80%)
 Strand = Plus / Minus

                                                                       
Query: 224 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 283
           ||||| || |||||||||||||||||||| |  || |||||| | ||||| || || |||
Sbjct: 857 gtctgaataatggtgttgtgccatgggtctgatagatgctgcagaaggttatcaaaaggc 798

                                                                       
Query: 284 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 343
           ||||| || ||||| ||||| ||||| | ||| || | ||| |||| ||| |||| ||||
Sbjct: 797 ccctttccagtcacattgtgttgcacaatgaatcctaagaatgccaacattgccaatctc 738

                                
Query: 344 ccgttggcgagctccttctcc 364
           || || || ||||||||||||
Sbjct: 737 ccattagcaagctccttctcc 717

---

>gb|BC002118.1| Mus musculus cDNA clone MGC:6623 IMAGE:3491066, complete cds
          Length = 1008

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 114/141 (80%)
 Strand = Plus / Minus

                                                                       
Query: 224 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 283
           ||||| || |||||||||||||||||||| |  || |||||| | ||||| || || |||
Sbjct: 773 gtctgaataatggtgttgtgccatgggtctgatagatgctgcagaaggttatcaaaaggc 714

                                                                       
Query: 284 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 343
           ||||| || ||||| ||||| ||||| | ||| || | ||| |||| ||| |||| ||||
Sbjct: 713 ccctttccagtcacattgtgttgcacaatgaatcctaagaatgccaacattgccaatctc 654

                                
Query: 344 ccgttggcgagctccttctcc 364
           || || || ||||||||||||
Sbjct: 653 ccattagcaagctccttctcc 633

---

>gb|AY233205.1| Vitis vinifera chlorophyll a/b-binding protein (Lhca1) mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 476

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 99/122 (81%)
 Strand = Plus / Minus

                                                                       
Query: 227 tggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggcccc 286
           |||||||||||||||||||||||||| |  | |||||||   ||||| || || ||||| 
Sbjct: 273 tggatgatggtgttgtgccatgggtctgagatgtgctgcaagaggttgtcaaatggccct 214

                                                                       
Query: 287 ttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccg 346
           || || ||||||||||| || || |  ||||||||||| |||| ||| || | |||||||
Sbjct: 213 tttccagtcacgttgtgttgaacaataaaccccaggaatgccaacattgctaatctcccg 154

             
Query: 347 tt 348
           ||
Sbjct: 153 tt 152

---

>emb|AJ309094.1|PPI309094 Pinus pinaster mRNA for putative chlorophyll a/b-binding protein
           type 4
          Length = 819

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 106/132 (80%)
 Strand = Plus / Minus

                                                                       
Query: 233 atggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccg 292
           ||||||||||||||||| || | ||| || ||| ||| ||| |||||||| ||||| || 
Sbjct: 743 atggtgttgtgccatggatcagacagatgttgcagcaagttgtcgaacgggccctttcct 684

                                                                       
Query: 293 gtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcg 352
           || || ||||| ||||| |  || |||||||| || | ||| ||||  ||||| ||||| 
Sbjct: 683 gttacattgtgttgcactacaaatcccaggaatgctaacattgccaacctcccattggca 624

                       
Query: 353 agctccttctcc 364
           ||||||||||||
Sbjct: 623 agctccttctcc 612

---

>gb|AY109341.1| Zea mays CL4601_3 mRNA sequence
          Length = 1460

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 223 ggtctggatgatggtgttgtgcca 246
           ||||||||||||||||||||||||
Sbjct: 280 ggtctggatgatggtgttgtgcca 303

---

>gb|AC019013.2|AC019013 Genomic Sequence For Arabidopsis thaliana, Clone T5E15, Chromosome V,
             complete sequence
          Length = 114056

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 119   cctactcctccacactttgtaca 141
             |||||||||||||||||||||||
Sbjct: 37526 cctactcctccacactttgtaca 37504

---

>emb|X82497.1|NTCAG4 N.tabacum mRNA for light-harvesting Ch1 a/b binding protein
          Length = 726

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 233 atggtgttgtgccatgggtcgg 254
           ||||||||||||||||||||||
Sbjct: 581 atggtgttgtgccatgggtcgg 560

---

>ref|NM_114615.3| Arabidopsis thaliana CAB4; chlorophyll binding AT3G47470 (CAB4)
           mRNA, complete cds
          Length = 1266

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 102/129 (79%)
 Strand = Plus / Minus

                                                                       
Query: 236 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 295
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 994 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 935

                                                                       
Query: 296 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 355
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 934 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 875

                    
Query: 356 tccttctcc 364
           || ||||||
Sbjct: 874 tctttctcc 866

---

>gb|BT015429.1| Arabidopsis thaliana At3g47470 mRNA sequence
          Length = 405

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 102/129 (79%)
 Strand = Plus / Minus

                                                                       
Query: 236 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 295
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 383 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 324

                                                                       
Query: 296 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 355
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 323 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 264

                    
Query: 356 tccttctcc 364
           || ||||||
Sbjct: 263 tctttctcc 255

---

>gb|AC007852.9| Drosophila melanogaster clone BACR33A10, complete sequence
          Length = 186333

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 113   ctgccacctactcctccacac 133
             |||||||||||||||||||||
Sbjct: 11776 ctgccacctactcctccacac 11756

---

>gb|AC007588.5| Drosophila melanogaster clone BACR30O03, complete sequence
          Length = 165177

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 113   ctgccacctactcctccacac 133
             |||||||||||||||||||||
Sbjct: 60657 ctgccacctactcctccacac 60677

---

>gb|BT000093.1| Arabidopsis thaliana chlorophyll A-B binding protein 4 precursor
           homolog (At3g47470) mRNA, complete cds
          Length = 891

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 102/129 (79%)
 Strand = Plus / Minus

                                                                       
Query: 236 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 295
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 734 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 675

                                                                       
Query: 296 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 355
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 674 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 615

                    
Query: 356 tccttctcc 364
           || ||||||
Sbjct: 614 tctttctcc 606

---

>gb|BC036687.1| Homo sapiens cDNA clone IMAGE:5259465
          Length = 3993

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 62   caaggacaaagtttcaccacc 82
            |||||||||||||||||||||
Sbjct: 3765 caaggacaaagtttcaccacc 3785

---

>gb|AY093080.1| Arabidopsis thaliana chlorophyll A-B binding protein 4 precursor
           homolog (At3g47470) mRNA, complete cds
          Length = 1055

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 102/129 (79%)
 Strand = Plus / Minus

                                                                       
Query: 236 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 295
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 834 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 775

                                                                       
Query: 296 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 355
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 774 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 715

                    
Query: 356 tccttctcc 364
           || ||||||
Sbjct: 714 tctttctcc 706

---

>gb|AC159237.2| Mus musculus BAC clone RP24-464G10 from chromosome 12, complete
             sequence
          Length = 222209

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 146   cagcaccccaaaataataatt 166
             |||||||||||||||||||||
Sbjct: 97909 cagcaccccaaaataataatt 97929

---

>gb|AF325012.2|AF325012 Arabidopsis thaliana AT3g47470 (AT3g47470/F1P2_20) mRNA, complete
           cds
          Length = 715

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 102/129 (79%)
 Strand = Plus / Minus

                                                                       
Query: 236 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 295
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 451 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 392

                                                                       
Query: 296 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 355
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 391 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 332

                    
Query: 356 tccttctcc 364
           || ||||||
Sbjct: 331 tctttctcc 323

---

>gb|AC090883.1|AC090883 Homo sapiens chromosome 3 clone RP11-117G9 map 3p, complete sequence
          Length = 172400

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 62     caaggacaaagtttcaccacc 82
              |||||||||||||||||||||
Sbjct: 170063 caaggacaaagtttcaccacc 170083

---

>emb|BX824775.1|CNS0A6UB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH71ZB01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 508

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 102/129 (79%)
 Strand = Plus / Minus

                                                                       
Query: 236 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 295
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 297 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 238

                                                                       
Query: 296 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 355
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 237 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 178

                    
Query: 356 tccttctcc 364
           || ||||||
Sbjct: 177 tctttctcc 169

---

>emb|BX826089.1|CNS0A6C9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL84ZA10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 973

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 102/129 (79%)
 Strand = Plus / Minus

                                                                       
Query: 236 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 295
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 824 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 765

                                                                       
Query: 296 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 355
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 764 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 705

                    
Query: 356 tccttctcc 364
           || ||||||
Sbjct: 704 tctttctcc 696

---

>emb|BX823268.1|CNS0A6MH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS18ZF07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1046

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 102/129 (79%)
 Strand = Plus / Minus

                                                                       
Query: 236 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 295
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 808 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 749

                                                                       
Query: 296 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 355
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 748 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 689

                    
Query: 356 tccttctcc 364
           || ||||||
Sbjct: 688 tctttctcc 680

---

>gb|AF276663.1|AF276663 Drosophila melanogaster comb (cg) gene, complete cds, alternatively
            spliced
          Length = 9504

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 113  ctgccacctactcctccacac 133
            |||||||||||||||||||||
Sbjct: 4304 ctgccacctactcctccacac 4324

---

>gb|AY086470.1| Arabidopsis thaliana clone 2531 mRNA, complete sequence
          Length = 1267

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 102/129 (79%)
 Strand = Plus / Minus

                                                                       
Query: 236 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 295
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 995 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 936

                                                                       
Query: 296 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 355
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 935 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 876

                    
Query: 356 tccttctcc 364
           || ||||||
Sbjct: 875 tctttctcc 867

---

>gb|AC027125.5| Homo sapiens chromosome 3 clone RP11-584M7 map 3p, complete sequence
          Length = 173842

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 62     caaggacaaagtttcaccacc 82
              |||||||||||||||||||||
Sbjct: 111543 caaggacaaagtttcaccacc 111563

---

>dbj|AK027185.1| Homo sapiens cDNA: FLJ23532 fis, clone LNG06911
          Length = 3189

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 62   caaggacaaagtttcaccacc 82
            |||||||||||||||||||||
Sbjct: 2950 caaggacaaagtttcaccacc 2970

---

>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 220    gatggtctggatgatggtgtt 240
              |||||||||||||||||||||
Sbjct: 631602 gatggtctggatgatggtgtt 631582

---

>gb|AE003815.4| Drosophila melanogaster chromosome 2R, section 35 of 73 of the complete
             sequence
          Length = 229685

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 113   ctgccacctactcctccacac 133
             |||||||||||||||||||||
Sbjct: 31518 ctgccacctactcctccacac 31538

---

>gb|AC127582.4| Mus musculus BAC clone RP24-89J3 from 12, complete sequence
          Length = 217949

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 146  cagcaccccaaaataataatt 166
            |||||||||||||||||||||
Sbjct: 9849 cagcaccccaaaataataatt 9829

---

>gb|M63931.1|ATHCABM Arabidopsis thaliana light-harvesting chlorophyll a/b-binding
           protein (Cab4) mRNA, complete cds
          Length = 1050

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 102/129 (79%)
 Strand = Plus / Minus

                                                                       
Query: 236 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 295
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 804 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 745

                                                                       
Query: 296 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 355
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 744 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 685

                    
Query: 356 tccttctcc 364
           || ||||||
Sbjct: 684 tctttctcc 676

---

>ref|NM_188089.1| Oryza sativa (japonica cultivar-group), Ozsa8521 predicted mRNA
          Length = 1089

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 216  cggagatggtctggatgatggtgttgtg 243
            ||||||||||||||| ||||| ||||||
Sbjct: 1009 cggagatggtctggaggatggcgttgtg 982

---

>ref|XM_415827.1| PREDICTED: Gallus gallus similar to myosin 18A isoform a; myosin 18A;
            myosin containing PDZ domain (LOC417581), mRNA
          Length = 7860

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 354  gctccttctccctgttctcg 373
            ||||||||||||||||||||
Sbjct: 7180 gctccttctccctgttctcg 7161

---

>emb|AL133520.5| Human DNA sequence from clone RP1-101A2 on chromosome 20, complete
             sequence
          Length = 47325

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 301   gtgctgcaccaggaaccccaggaa 324
             |||| |||||||||||||||||||
Sbjct: 32871 gtgcagcaccaggaaccccaggaa 32848

---

>gb|AC024608.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-333I24, complete
              sequence
          Length = 215829

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    catcctcagcaccccaaaat 159
              ||||||||||||||||||||
Sbjct: 132164 catcctcagcaccccaaaat 132183

---

>ref|XM_535195.2| PREDICTED: Canis familiaris similar to inter-alpha globulin
           inhibitor H2 polypeptide (LOC478011), mRNA
          Length = 2941

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 tggtctggatgatggtgttg 241
           ||||||||||||||||||||
Sbjct: 377 tggtctggatgatggtgttg 358

---

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 223    ggtctggatgatggtgttgt 242
              ||||||||||||||||||||
Sbjct: 172999 ggtctggatgatggtgttgt 172980

---

>gb|AF448525.1| Mytilus galloprovincialis precollagen-P mRNA, complete cds
          Length = 2781

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 307  caccaggaaccccaggaacgccag 330
            ||||||||||||||||||| ||||
Sbjct: 1066 caccaggaaccccaggaacaccag 1089

---

>emb|BX469902.7| Zebrafish DNA sequence from clone CH211-277G23 in linkage group 9,
             complete sequence
          Length = 179135

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   caccccaaaataataattca 168
             ||||||||||||||||||||
Sbjct: 16903 caccccaaaataataattca 16922

---

>dbj|AB189167.1| Oryza sativa (japonica cultivar-group) OsIDHa mRNA for NAD-dependent
            isocitrate dehydrogenase a, complete cds
          Length = 1424

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 216  cggagatggtctggatgatggtgttgtg 243
            ||||||||||||||| ||||| ||||||
Sbjct: 1135 cggagatggtctggaggatggcgttgtg 1108

---

>gb|S68728.1| LHC Ib-21=light-harvesting complex I [Hordeum vulgare=barley,
           Prato, mRNA Chloroplast, 878 nt]
          Length = 878

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 313 gaaccccaggaacgccagcatggccagtctcccgtt 348
           |||||||| |||||||||||| ||||| | ||||||
Sbjct: 543 gaaccccacgaacgccagcatcgccagccgcccgtt 508

---

>dbj|AK045799.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230311F11 product:hypothetical
            Proline-rich region/Forkhead-associated (FHA) domain
            containing protein, full insert sequence
          Length = 2228

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 355  ctccttctccctgttctcga 374
            ||||||||||||||||||||
Sbjct: 1466 ctccttctccctgttctcga 1447

---

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 251    tcggccaggtgctgctgcag 270
              ||||||||||||||||||||
Sbjct: 665703 tcggccaggtgctgctgcag 665722

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 216     cggagatggtctggatgatggtgttgtg 243
               ||||||||||||||| ||||| ||||||
Sbjct: 9668714 cggagatggtctggaggatggcgttgtg 9668687

---

>gb|AC097525.3| Homo sapiens BAC clone RP11-627E8 from 2, complete sequence
          Length = 55514

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    catgggtgatattacaagta 30
             ||||||||||||||||||||
Sbjct: 11077 catgggtgatattacaagta 11096

---

>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0038F12
          Length = 190014

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 216    cggagatggtctggatgatggtgttgtg 243
              ||||||||||||||| ||||| ||||||
Sbjct: 106717 cggagatggtctggaggatggcgttgtg 106690

---

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 215     ccggagatggtctggatgatggtg 238
               ||||||||||||||||||| ||||
Sbjct: 5018847 ccggagatggtctggatgagggtg 5018824

---

>gb|AF218305.1|AF218305 Hordeum vulgare chlorophyll a/b binding protein precursor (lhca1)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 784

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 313 gaaccccaggaacgccagcatggccagtctcccgtt 348
           |||||||| |||||||||||| ||||| | ||||||
Sbjct: 661 gaaccccacgaacgccagcatcgccagccgcccgtt 626

---

>dbj|AK059596.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-D11, full
            insert sequence
          Length = 1522

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 216  cggagatggtctggatgatggtgttgtg 243
            ||||||||||||||| ||||| ||||||
Sbjct: 1149 cggagatggtctggaggatggcgttgtg 1122

---

>gb|AF082100.1|AF082100 Streptomyces sp. MA6548 FK506 peptide synthetase (fkbP), FK506
            oxidase (fkbO), and FK506 polyketide synthase (fkbB)
            genes, complete cds
          Length = 28732

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 249  ggtcggccaggtgctgctgcaggt 272
            ||||| ||||||||||||||||||
Sbjct: 3454 ggtcgtccaggtgctgctgcaggt 3431

---

>emb|AL645731.8| Mouse DNA sequence from clone RP23-423G13 on chromosome 4, complete
              sequence
          Length = 148213

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 355    ctccttctccctgttctcga 374
              ||||||||||||||||||||
Sbjct: 133067 ctccttctccctgttctcga 133086


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,412,743
Number of Sequences: 3902068
Number of extensions: 3412743
Number of successful extensions: 64776
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64527
Number of HSP's gapped (non-prelim): 244
length of query: 394
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 372
effective length of database: 17,147,199,772
effective search space: 6378758315184
effective search space used: 6378758315184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---