| Clone Name | rbaet30c06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor Length = 2780 Score = 105 bits (53), Expect = 7e-20 Identities = 59/61 (96%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2723 gctcacttgccggggacgaagttggtggcgtaagcccaggcgttgttgttgacggggtcg 2664 Query: 275 g 275 | Sbjct: 2663 g 2663
>gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b protein gene, complete cds Length = 1633 Score = 105 bits (53), Expect = 7e-20 Identities = 59/61 (96%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcgg 275 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1196 ctcacttgccggggacgaagttggtggcgaaggcccaggcgttgttgttgacggggtcgg 1137 Query: 276 c 276 | Sbjct: 1136 c 1136
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 99.6 bits (50), Expect = 5e-18 Identities = 59/62 (95%) Strand = Plus / Minus Query: 214 agctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 867 agcttacttgccgggcacgaagttggtggcgaaggcccaggcgttgttgttgacggggtc 808 Query: 274 gg 275 || Sbjct: 807 gg 806
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 99.6 bits (50), Expect = 5e-18 Identities = 59/62 (95%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 23604331 gctcacttgccggggacgaagttggtggcgtaggcccaggcgttgttgttgacggggtcg 23604272 Query: 275 gc 276 || Sbjct: 23604271 gc 23604270 Score = 89.7 bits (45), Expect = 4e-15 Identities = 57/61 (93%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcgg 275 ||||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||| Sbjct: 30025136 ctcacttgccggggacgaagttggtggcgtaggcccatgcgttgttgttgacggggtcgg 30025077 Query: 276 c 276 | Sbjct: 30025076 c 30025076
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 99.6 bits (50), Expect = 5e-18 Identities = 59/62 (95%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 67030 gctcacttgccggggacgaagttggtggcgtaggcccaggcgttgttgttgacggggtcg 66971 Query: 275 gc 276 || Sbjct: 66970 gc 66969
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 99.6 bits (50), Expect = 5e-18 Identities = 59/62 (95%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 859 gctcacttgccggggacgaagttggtggcgtaggcccaggcgttgttgttgacggggtcg 800 Query: 275 gc 276 || Sbjct: 799 gc 798
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 99.6 bits (50), Expect = 5e-18 Identities = 59/62 (95%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 858 gctcacttgccggggacgaagttggtggcgtaggcccaggcgttgttgttgacggggtcg 799 Query: 275 gc 276 || Sbjct: 798 gc 797
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 99.6 bits (50), Expect = 5e-18 Identities = 59/62 (95%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 1288 gctcacttgccggggacgaagttggtggcgtaggcccaggcgttgttgttgacggggtcg 1229 Query: 275 gc 276 || Sbjct: 1228 gc 1227
>dbj|AK061619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E02, full insert sequence Length = 650 Score = 99.6 bits (50), Expect = 5e-18 Identities = 59/62 (95%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 388 gctcacttgccggggacgaagttggtggcgtaggcccaggcgttgttgttgacggggtcg 329 Query: 275 gc 276 || Sbjct: 328 gc 327
>gb|L23107.1|GBICABBP Ginkgo biloba nuclear-encoded chloroplast chlorophyll a/b binding protein mRNA, complete cds Length = 997 Score = 97.6 bits (49), Expect = 2e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcgg 275 |||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 872 ctcatttgccggggacgaagttggtggcgaaggcccaggcgttgttgttgacggggtcgg 813 Query: 276 c 276 | Sbjct: 812 c 812
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 95.6 bits (48), Expect = 7e-17 Identities = 57/60 (95%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 1247 tcacttgccggggacgaagttggtggcgtaggcccaggcgttgttgttgacggggtcggc 1188
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 95.6 bits (48), Expect = 7e-17 Identities = 57/60 (95%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 10793782 tcacttgccggggacgaagttggtggcgtacgcccaggcgttgttgttgacggggtcggc 10793723
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 95.6 bits (48), Expect = 7e-17 Identities = 57/60 (95%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 17505 tcacttgccggggacgaagttggtggcgtacgcccaggcgttgttgttgacggggtcggc 17446
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 95.6 bits (48), Expect = 7e-17 Identities = 57/60 (95%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 130400 tcacttgccggggacgaagttggtggcgtacgcccaggcgttgttgttgacggggtcggc 130341
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 95.6 bits (48), Expect = 7e-17 Identities = 57/60 (95%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 850 tcacttgccggggacgaagttggtggcgtacgcccaggcgttgttgttgacggggtcggc 791
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 95.6 bits (48), Expect = 7e-17 Identities = 57/60 (95%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 855 tcacttgccggggacgaagttggtggcgtacgcccaggcgttgttgttgacggggtcggc 796
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 95.6 bits (48), Expect = 7e-17 Identities = 57/60 (95%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 857 tcacttgccggggacgaagttggtggcgtacgcccaggcgttgttgttgacggggtcggc 798
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 95.6 bits (48), Expect = 7e-17 Identities = 57/60 (95%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 855 tcacttgccggggacgaagttggtggcgtacgcccaggcgttgttgttgacggggtcggc 796
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 95.6 bits (48), Expect = 7e-17 Identities = 57/60 (95%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 855 tcacttgccggggacgaagttggtggcgtacgcccaggcgttgttgttgacggggtcggc 796
>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 1022 Score = 95.6 bits (48), Expect = 7e-17 Identities = 57/60 (95%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 836 tcacttgccggggacgaagttggtggcgtacgcccaggcgttgttgttgacggggtcggc 777
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 91.7 bits (46), Expect = 1e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 219 acttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 784 acttgccggggacgaagttggtggcgtaggcccaggcgttgttgttgacggggtcggc 727
>emb|X53398.1|ZMCABM7 Z.mays cab-m7 gene for light harvesting chlorophyll a/b binding protein Length = 2261 Score = 89.7 bits (45), Expect = 4e-15 Identities = 57/61 (93%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcgg 275 ||||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||| Sbjct: 1811 ctcacttgccggggacgaagttggtggcgtaggcccaagcgttgttgttgacggggtcgg 1752 Query: 276 c 276 | Sbjct: 1751 c 1751
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 89.7 bits (45), Expect = 4e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcgg 275 ||||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||| Sbjct: 13875 ctcacttgccggggacgaagttggtggcgtaggcccatgcgttgttgttgacggggtcgg 13934 Query: 276 c 276 | Sbjct: 13935 c 13935
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 89.7 bits (45), Expect = 4e-15 Identities = 57/61 (93%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcgg 275 ||||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||| Sbjct: 21126 ctcacttgccggggacgaagttggtggcgtaggcccatgcgttgttgttgacggggtcgg 21067 Query: 276 c 276 | Sbjct: 21066 c 21066
>emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll a/b binding protein LHCP Length = 967 Score = 89.7 bits (45), Expect = 4e-15 Identities = 57/61 (93%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcgg 275 ||||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||| Sbjct: 863 ctcacttgccggggacgaagttggtggcgtaggcccaagcgttgttgttgacggggtcgg 804 Query: 276 c 276 | Sbjct: 803 c 803
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 89.7 bits (45), Expect = 4e-15 Identities = 57/61 (93%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcgg 275 ||||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||| Sbjct: 880 ctcacttgccggggacgaagttggtggcgtaggcccatgcgttgttgttgacggggtcgg 821 Query: 276 c 276 | Sbjct: 820 c 820
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 89.7 bits (45), Expect = 4e-15 Identities = 57/61 (93%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcgg 275 ||||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||| Sbjct: 880 ctcacttgccggggacgaagttggtggcgtaggcccatgcgttgttgttgacggggtcgg 821 Query: 276 c 276 | Sbjct: 820 c 820
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 89.7 bits (45), Expect = 4e-15 Identities = 57/61 (93%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcgg 275 ||||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||| Sbjct: 882 ctcacttgccggggacgaagttggtggcgtaggcccatgcgttgttgttgacggggtcgg 823 Query: 276 c 276 | Sbjct: 822 c 822
>dbj|AK058312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H12, full insert sequence Length = 1040 Score = 89.7 bits (45), Expect = 4e-15 Identities = 57/61 (93%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcgg 275 ||||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||| Sbjct: 865 ctcacttgccggggacgaagttggtggcgtaggcccatgcgttgttgttgacggggtcgg 806 Query: 276 c 276 | Sbjct: 805 c 805
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 89.7 bits (45), Expect = 4e-15 Identities = 57/61 (93%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcgg 275 ||||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||| Sbjct: 882 ctcacttgccggggacgaagttggtggcgtaggcccatgcgttgttgttgacggggtcgg 823 Query: 276 c 276 | Sbjct: 822 c 822
>gb|AY109324.1| Zea mays CL187_1 mRNA sequence Length = 2262 Score = 89.7 bits (45), Expect = 4e-15 Identities = 57/61 (93%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcgg 275 ||||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||| Sbjct: 1811 ctcacttgccggggacgaagttggtggcgtaggcccaagcgttgttgttgacggggtcgg 1752 Query: 276 c 276 | Sbjct: 1751 c 1751
>gb|U43707.1|PAU43707 Picea abies chlorophyll a/b binding protein of PS II mRNA, partial cds Length = 551 Score = 89.7 bits (45), Expect = 4e-15 Identities = 51/53 (96%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 389 ccggggacgaagttggtggcgtaagcccaggcgttgttgttgacggggtcggc 337
>ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 87.7 bits (44), Expect = 2e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||||||| ||||||||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 798 tcacttgccggggacgaagttggtggcgtaggcccatgcgttgttgttgacggggtcggc 739
>gb|AY389597.1| Hyacinthus orientalis chloroplast chlorophyll a/b-binding protein mRNA, partial cds Length = 575 Score = 87.7 bits (44), Expect = 2e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||||||| || ||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 472 tcacttgccggggacaaagttggtggcaaaagcccaggcattgttgttgacggggtcggc 413
>gb|M12152.1|LGIAB19A Lemna gibba chlorophyll a/b apoprotein gene, complete cds Length = 1913 Score = 87.7 bits (44), Expect = 2e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct: 1534 tcacttgccggggacgaagttggtggcgaaggcccaggcgttgttggcgacggggtcggc 1475
>gb|AY430082.1| Trifolium pratense chlorophyll a/b binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 987 Score = 85.7 bits (43), Expect = 7e-14 Identities = 55/59 (93%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 855 gctcactttccgggaacaaagttggtggcaaaagcccaggcgttgttgttgactgggtc 797
>ref|NM_001036402.1| Arabidopsis thaliana O-acetyltransferase AT2G34410 transcript variant AT2G34410.3 mRNA, complete cds Length = 3299 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 2483 gctcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcg 2542 Query: 275 gc 276 || Sbjct: 2543 gc 2544
>ref|NM_001036401.1| Arabidopsis thaliana O-acetyltransferase AT2G34410 transcript variant AT2G34410.2 mRNA, complete cds Length = 3338 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 2483 gctcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcg 2542 Query: 275 gc 276 || Sbjct: 2543 gc 2544
>ref|NM_128994.2| Arabidopsis thaliana LHB1B2; chlorophyll binding AT2G34420 (LHB1B2) transcript variant AT2G34420.1 mRNA, complete cds Length = 1354 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 855 gctcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcg 796 Query: 275 gc 276 || Sbjct: 795 gc 794
>ref|NM_179900.1| Arabidopsis thaliana LHB1B2 AT2G34420 (LHB1B2) transcript variant AT2G34420.2 mRNA, complete cds Length = 1312 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 813 gctcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcg 754 Query: 275 gc 276 || Sbjct: 753 gc 752
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||||||||| ||||||||||||||| | ||||||||||||||| |||||||||| Sbjct: 78970 gctcacttgccggggacgaagttggtggcgtatgcccaggcgttgttggcgacggggtcg 79029 Query: 275 gc 276 || Sbjct: 79030 gc 79031
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||||||||| ||||||||||||||| | ||||||||||||||| |||||||||| Sbjct: 21808846 gctcacttgccggggacgaagttggtggcgtatgcccaggcgttgttggcgacggggtcg 21808787 Query: 275 gc 276 || Sbjct: 21808786 gc 21808785
>gb|AY142513.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 829 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 800 gctcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcg 741 Query: 275 gc 276 || Sbjct: 740 gc 739
>gb|AY045806.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 1015 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 855 gctcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcg 796 Query: 275 gc 276 || Sbjct: 795 gc 794
>gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete sequence Length = 112763 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 93201 gctcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcg 93260 Query: 275 gc 276 || Sbjct: 93261 gc 93262 Score = 56.0 bits (28), Expect = 6e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgac 267 ||||||| ||||| ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 96106 ctcactttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 96055
>gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 map ve016, complete sequence Length = 93060 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 81001 gctcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcg 80942 Query: 275 gc 276 || Sbjct: 80941 gc 80940 Score = 56.0 bits (28), Expect = 6e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgac 267 ||||||| ||||| ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 78096 ctcactttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 78147
>gb|AY081587.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 883 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 800 gctcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcg 741 Query: 275 gc 276 || Sbjct: 740 gc 739
>gb|AY065125.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding protein (At2g34420; T31E10.24) mRNA, complete cds Length = 969 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 851 gctcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcg 792 Query: 275 gc 276 || Sbjct: 791 gc 790
>gb|AF419587.1|AF419587 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 851 gctcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcg 792 Query: 275 gc 276 || Sbjct: 791 gc 790
>gb|AF419548.1|AF419548 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 851 gctcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcg 792 Query: 275 gc 276 || Sbjct: 791 gc 790
>gb|AF428397.1|AF428397 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 1024 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 851 gctcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcg 792 Query: 275 gc 276 || Sbjct: 791 gc 790
>gb|AY039561.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 995 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 851 gctcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcg 792 Query: 275 gc 276 || Sbjct: 791 gc 790
>gb|AF372886.1|AF372886 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 851 gctcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcg 792 Query: 275 gc 276 || Sbjct: 791 gc 790
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||||||||| ||||||||||||||| | ||||||||||||||| |||||||||| Sbjct: 21801875 gctcacttgccggggacgaagttggtggcgtatgcccaggcgttgttggcgacggggtcg 21801816 Query: 275 gc 276 || Sbjct: 21801815 gc 21801814
>emb|BX819530.1|CNS0A9V8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB87ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 291 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 171 gctcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcg 112 Query: 275 gc 276 || Sbjct: 111 gc 110
>emb|BX820019.1|CNS0A9C1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS62ZC05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 903 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 832 gctcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcg 773 Query: 275 gc 276 || Sbjct: 772 gc 771
>emb|BX820007.1|CNS0A9CM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS5ZF09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 885 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 835 gctcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcg 776 Query: 275 gc 276 || Sbjct: 775 gc 774
>emb|BX822910.1|CNS0A63G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB71ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 919 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 84 gctcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcg 143 Query: 275 gc 276 || Sbjct: 144 gc 145
>emb|X64460.1|ATLH1B2 A.thaliana Lhb1B2 gene for photosystem II chlorophyll a/b binding protein Length = 1405 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 1100 gctcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcg 1041 Query: 275 gc 276 || Sbjct: 1040 gc 1039
>emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting chlorophyll a/b- binding protein ( LHCP ) Length = 1030 Score = 83.8 bits (42), Expect = 3e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 219 acttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||||| ||||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 973 acttgccggggacgaagttggtggcgaaggcccaggcattgttgtttacggggtcggc 916
>dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I09, full insert sequence Length = 1106 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||||||||| ||||||||||||||| | ||||||||||||||| |||||||||| Sbjct: 845 gctcacttgccggggacgaagttggtggcgtatgcccaggcgttgttggcgacggggtcg 786 Query: 275 gc 276 || Sbjct: 785 gc 784
>dbj|AK058315.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A06, full insert sequence Length = 685 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||||||||| ||||||||||||||| | ||||||||||||||| |||||||||| Sbjct: 420 gctcacttgccggggacgaagttggtggcgtatgcccaggcgttgttggcgacggggtcg 361 Query: 275 gc 276 || Sbjct: 360 gc 359
>gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||||||||| ||||||||||||||| | ||||||||||||||| |||||||||| Sbjct: 834 gctcacttgccggggacgaagttggtggcgtatgcccaggcgttgttggcgacggggtcg 775 Query: 275 gc 276 || Sbjct: 774 gc 773
>gb|AF003127.1|AF003127 Mesembryanthemum crystallinum chlorophyll a/b-binding protein (CAB) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1042 Score = 81.8 bits (41), Expect = 1e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||| Sbjct: 828 tcacttgccgggaacgaagttggtggcgaaggcccaagcattgttgttgactgggtc 772
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA, complete cds Length = 1022 Score = 81.8 bits (41), Expect = 1e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcgg 275 ||||||||||||| || |||||||||||| | ||||| |||||||||||||||||||||| Sbjct: 841 ctcacttgccggggacaaagttggtggcgtaggcccatgcgttgttgttgacggggtcgg 782 Query: 276 c 276 | Sbjct: 781 c 781
>gb|AY079110.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 798 Score = 79.8 bits (40), Expect = 4e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 798 tcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 739
>gb|AY079101.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 798 Score = 79.8 bits (40), Expect = 4e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 798 tcactttccggggacgaagttggtggcgaaggcccaagcgttgttgttgactgggtcggc 739
>dbj|AB211497.1| Lemna paucicostata LpCAB1 mRNA for CAB homologue1, partial cds Length = 695 Score = 77.8 bits (39), Expect = 2e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 231 cgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 695 cgaagttggtggcgaaggcccaggcgttgttgttgacggggtc 653
>gb|AF139467.2|AF139467 Vigna radiata LHCII type I chlorophyll a/b binding protein (CipLhcb1) mRNA, complete cds; nuclear gene for chloroplast product Length = 975 Score = 77.8 bits (39), Expect = 2e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||||| ||||| ||||||||||||||| | |||||||||||||||||||| ||||| Sbjct: 852 gctcactttccggggacgaagttggtggcgtaggcccaggcgttgttgttgactgggtc 794
>gb|U39475.1|GMU39475 Glycine max chlorophyll a/b-binding protein (cab3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 977 Score = 77.8 bits (39), Expect = 2e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||||||||||| ||||||||||||||| | |||||||| ||||||||||| ||||| Sbjct: 825 gctcacttgccggggacgaagttggtggcgtaggcccaggcattgttgttgactgggtc 767
>gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 Score = 75.8 bits (38), Expect = 7e-11 Identities = 53/58 (91%) Strand = Plus / Minus Query: 219 acttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||||| || |||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 808 acttgccggggacaaagttggtggcgaatgcccatgcattgttgttgacggggtcggc 751
>gb|S73603.1| Pinus thunbergii chlorophyll a/b-binding protein (LHCPII) mRNA, complete cds Length = 998 Score = 73.8 bits (37), Expect = 3e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 221 ttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||||| ||||||||||||||| | ||||||||||||||||| |||||||| Sbjct: 860 ttgccggggacgaagttggtggcgtaggcccaggcgttgttgttaacggggtc 808
>emb|X14506.1|PSCABIIB Pinus sylvestris cab II/1B mRNA for chlorophyll a/b-binding protein Length = 1006 Score = 73.8 bits (37), Expect = 3e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 221 ttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||||| ||||||||||||||| | ||||||||||||||||| |||||||| Sbjct: 869 ttgccggggacgaagttggtggcgtaggcccaggcgttgttgttaacggggtc 817
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding protein Length = 869 Score = 73.8 bits (37), Expect = 3e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcgg 275 ||||||||||||| || ||||||||||| | ||||| |||||||||||||||||||||| Sbjct: 811 ctcacttgccgggcacaaagttggtggcataggcccatgcgttgttgttgacggggtcgg 752 Query: 276 c 276 | Sbjct: 751 c 751
>gb|AF079590.1|AF079590 Sorghum bicolor photosystem II type II chlorophyll a/b binding protein (CABII) mRNA, partial cds Length = 714 Score = 73.8 bits (37), Expect = 3e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 221 ttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||||| ||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 574 ttgccggggacgaagttggtggcgtaagcccaggcgttgttggcgacggggtc 522
>emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein Length = 934 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 221 ttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||| |||||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 815 ttgccggggacgaagtttgtggcaaatgcccaagcgttgttgttgacggggtcggc 760
>gb|DQ226825.1| Boechera divaricarpa isolate SLW-B-H09 mRNA sequence Length = 775 Score = 69.9 bits (35), Expect = 4e-09 Identities = 48/53 (90%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgac 267 || ||||| ||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 634 gcwcactttccggggacgaagttggtggcgaaggcccatgcgttgttgttgac 582
>emb|X16436.1|SACAB Mustard cab gene for chlorophyll a/b-binding protein Length = 2774 Score = 69.9 bits (35), Expect = 4e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgac 267 |||||| ||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 2376 tcactttccggggacgaagttggtggcgaaggcccatgcgttgttgttgac 2326
>emb|X15894.1|SACAB1 Sinapsis alba cab-1 gene for chlorophyll a/b-binding polypeptide Length = 2775 Score = 69.9 bits (35), Expect = 4e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgac 267 |||||| ||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 2377 tcactttccggggacgaagttggtggcgaaggcccatgcgttgttgttgac 2327
>emb|X16647.1|RSCHABBP Radish mRNA for chlorophyll a/b binding protein of photosystem II Length = 518 Score = 69.9 bits (35), Expect = 4e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||||| ||||| ||||||||||| ||||| ||||| |||||||||||||| ||||| Sbjct: 377 gctcactttccggggacgaagttggtagcgaaggcccatgcgttgttgttgactgggtc 319
>dbj|AB013728.1| Cryptomeria japonica mRNA for light-harvesting chlorophyll a/b-binding protein of photosystem II, complete cds Length = 935 Score = 69.9 bits (35), Expect = 4e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||||| |||||||| ||||| ||||| |||||||||||||||||||||| ||||| Sbjct: 814 gctcacttcccgggaacaaagttagtggcataagcccaggcgttgttgttgacagggtc 756
>dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRNA for type II light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 989 Score = 69.9 bits (35), Expect = 4e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcgg 275 |||||||||||| ||||||||||||||| | | ||||||||||||| ||||||||||| Sbjct: 824 tcacttgccggggacgaagttggtggcgtatgaccaggcgttgttggcgacggggtcgg 766
>ref|NM_102733.2| Arabidopsis thaliana CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding AT1G29930 (CAB1) mRNA, complete cds Length = 1044 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgtt 264 |||||||| |||||||| |||||||||||||| ||||| ||||||||||| Sbjct: 872 gctcactttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 823
>ref|NM_102731.2| Arabidopsis thaliana CAB3 (CHLOROPHYLL A/B BINDING PROTEIN 3); chlorophyll binding AT1G29910 (CAB3) mRNA, complete cds Length = 1020 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| |||||||| |||||||| ||||| ||||| |||||||||||||| || ||| Sbjct: 859 gctcactttccgggaacaaagttggttgcgaaggcccatgcgttgttgttgactggatcg 800 Query: 275 gc 276 || Sbjct: 799 gc 798
>ref|NM_102732.2| Arabidopsis thaliana CAB2; chlorophyll binding AT1G29920 (CAB2) mRNA, complete cds Length = 1176 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||| Sbjct: 873 gctcactttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcg 814 Query: 275 gc 276 || Sbjct: 813 gc 812
>gb|DQ226787.1| Boechera divaricarpa isolate SLW-B-B06 mRNA sequence Length = 827 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgtt 264 |||||||| |||||||| |||||||||||||| ||||| ||||||||||| Sbjct: 634 gctcactttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 585
>gb|BT000726.1| Arabidopsis thaliana clone RAFL06-67-G16 (R11472) putative photosystem II type I chlorophyll a /b binding protein (At1g29920) mRNA, complete cds Length = 1044 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||| Sbjct: 859 gctcactttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcg 800 Query: 275 gc 276 || Sbjct: 799 gc 798
>gb|AY091169.1| Arabidopsis thaliana putative chlorophyll a/b-binding protein (At1g29930) mRNA, complete cds Length = 835 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgtt 264 |||||||| |||||||| |||||||||||||| ||||| ||||||||||| Sbjct: 806 gctcactttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 757
>gb|AY050935.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At1g29930) mRNA, complete cds Length = 1014 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgtt 264 |||||||| |||||||| |||||||||||||| ||||| ||||||||||| Sbjct: 872 gctcactttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 823
>gb|AY128345.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding protein, putative (At1g29920) mRNA, complete cds Length = 994 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||| Sbjct: 859 gctcactttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcg 800 Query: 275 gc 276 || Sbjct: 799 gc 798
>gb|AY114594.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29910) mRNA, complete cds Length = 870 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| |||||||| |||||||| ||||| ||||| |||||||||||||| || ||| Sbjct: 806 gctcactttccgggaacaaagttggttgcgaaggcccatgcgttgttgttgactggatcg 747 Query: 275 gc 276 || Sbjct: 746 gc 745
>gb|AY081572.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29920) mRNA, complete cds Length = 898 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||| Sbjct: 806 gctcactttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcg 747 Query: 275 gc 276 || Sbjct: 746 gc 745
>gb|AY065165.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29910; F1N18.5) mRNA, complete cds Length = 1019 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| |||||||| |||||||| ||||| ||||| |||||||||||||| || ||| Sbjct: 859 gctcactttccgggaacaaagttggttgcgaaggcccatgcgttgttgttgactggatcg 800 Query: 275 gc 276 || Sbjct: 799 gc 798
>gb|AY062814.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29920; F1N18.4) mRNA, complete cds Length = 1007 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||| Sbjct: 858 gctcactttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcg 799 Query: 275 gc 276 || Sbjct: 798 gc 797
>gb|AY058180.1| Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 1019 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgtt 264 |||||||| |||||||| |||||||||||||| ||||| ||||||||||| Sbjct: 872 gctcactttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 823
>gb|AF428359.1|AF428359 Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 1045 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgtt 264 |||||||| |||||||| |||||||||||||| ||||| ||||||||||| Sbjct: 872 gctcactttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 823
>gb|AY054198.1| Arabidopsis thaliana At1g29920/F1N18_80 mRNA, complete cds Length = 1027 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||| Sbjct: 852 gctcactttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcg 793 Query: 275 gc 276 || Sbjct: 792 gc 791
>gb|AY052237.1| Arabidopsis thaliana At1g29920/F1N18_80 mRNA, complete cds Length = 1027 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||| Sbjct: 858 gctcactttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcg 799 Query: 275 gc 276 || Sbjct: 798 gc 797
>gb|AY045673.1| Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 999 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgtt 264 |||||||| |||||||| |||||||||||||| ||||| ||||||||||| Sbjct: 872 gctcactttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 823
>emb|BX814964.1|CNS0AE8Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZE02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 307 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgtt 264 |||||||| |||||||| |||||||||||||| ||||| ||||||||||| Sbjct: 176 gctcactttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 127
>emb|BX815726.1|CNS0ACD7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS89ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 930 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgtt 264 |||||||| |||||||| |||||||||||||| ||||| ||||||||||| Sbjct: 841 gctcactttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 792
>emb|BX821952.1|CNS0AABH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 949 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 219 acttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||| ||||| ||||||||||||||||| ||||| ||||||||||| || |||||||| Sbjct: 828 actttccggggacgaagttggtggcgaaggcccaagcgttgttgttaactgggtcggc 771
>emb|BX821505.1|CNS0A93G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL46ZF04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 959 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||||||||||||| | ||||| |||||||||| ||| |||||| Sbjct: 842 gctcactttccggggacgaagttggtggcggaggcccaagcgttgttgtagactgggtcg 783 Query: 275 gc 276 || Sbjct: 782 gc 781
>emb|BX821638.1|CNS0A92F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL5ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 911 Score = 67.9 bits (34), Expect = 2e-08 Identities = 56/62 (90%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| ||||| ||||| ||||||||||| ||||| |||||||||||||| |||||| Sbjct: 834 gctcactttccggggacgaa-ttggtggcgaaggcccaagcgttgttgttgactgggtcg 776 Query: 275 gc 276 || Sbjct: 775 gc 774
>gb|AC022455.5|AC022455 Arabidopsis thaliana chromosome 1 BAC T1P2 genomic sequence, complete sequence Length = 82053 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgtt 264 |||||||| |||||||| |||||||||||||| ||||| ||||||||||| Sbjct: 752 gctcactttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 703
>gb|AC008030.4|AC008030 Arabidopsis thaliana chromosome I BAC F1N18 genomic sequence, complete sequence Length = 101075 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| |||||||| |||||||| ||||| ||||| |||||||||||||| || ||| Sbjct: 22544 gctcactttccgggaacaaagttggttgcgaaggcccatgcgttgttgttgactggatcg 22485 Query: 275 gc 276 || Sbjct: 22484 gc 22483 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||| Sbjct: 19898 gctcactttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcg 19839 Query: 275 gc 276 || Sbjct: 19838 gc 19837 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgtt 264 |||||||| |||||||| |||||||||||||| ||||| ||||||||||| Sbjct: 16109 gctcactttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 16158
>gb|AY086905.1| Arabidopsis thaliana clone 29298 mRNA, complete sequence Length = 1041 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||| Sbjct: 873 gctcactttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcg 814 Query: 275 gc 276 || Sbjct: 813 gc 812
>gb|AF247178.1|AF247178 Picea glauca needle chlorophyll a/b-binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1096 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttg 262 |||||||||||||||||| ||||||||| | ||||||||||||||| Sbjct: 874 tcacttgccgggaacgaaattggtggcgtaggcccaggcgttgttg 829
>emb|X03909.1|ATLHCP3 A.thaliana gene (LHCP AB 140) for chlorophyll a/b binding protein Length = 1109 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgtt 264 |||||||| |||||||| |||||||||||||| ||||| ||||||||||| Sbjct: 1023 gctcactttccgggaacaaagttggtggcgaaggcccatgcgttgttgtt 974
>emb|X03908.1|ATLHCP2 A.thaliana gene (LHCP AB 180) for chlorophyll a/b binding protein Length = 1060 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| |||||||| |||||||| ||||| ||||| |||||||||||||| || ||| Sbjct: 1012 gctcactttccgggaacaaagttggttgcgaaggcccatgcgttgttgttgactggatcg 953 Query: 275 gc 276 || Sbjct: 952 gc 951
>emb|X03907.1|ATLHCP1 A.thaliana gene (LHCP AB 165) for chlorophyll a/b binding protein Length = 999 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||| Sbjct: 951 gctcactttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcg 892 Query: 275 gc 276 || Sbjct: 891 gc 890
>emb|X14794.1|ZMCAB1 Maize cab-1 gene for chlorophyll a/b-binding protein Length = 2100 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 212 tgagctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacgggg 271 |||||| | |||||||| ||||||||||||||| | ||||| |||||||||||||| ||| Sbjct: 1685 tgagcttagttgccggggacgaagttggtggcgtaggcccatgcgttgttgttgactggg 1626 Query: 272 tc 273 || Sbjct: 1625 tc 1624 Score = 42.1 bits (21), Expect = 0.91 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 68 ttagtgtacacacaccaactcatcatctcgact 100 |||||||||| || ||||||||||||||||||| Sbjct: 1833 ttagtgtaca-acgccaactcatcatctcgact 1802
>gb|AF165529.1|AF165529 Rumex palustris chlorophyll a/b binding protein (CAB1) mRNA, complete cds Length = 986 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttg 262 ||||||||||||||||||||| |||||| ||||||| ||||||||| Sbjct: 849 tcacttgccgggaacgaagttagtggcgtaagcccaagcgttgttg 804
>gb|AF022739.1|AF022739 Oryza sativa chlorophyll a-b binding protein mRNA, complete cds Length = 1100 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||||||||| || || ||||||||| | ||||||||||||||| |||||||||| Sbjct: 841 gctcacttgccggggacaaaattggtggcgtatgcccaggcgttgttggcgacggggtcg 782 Query: 275 gc 276 || Sbjct: 781 gc 780
>dbj|D00571.1|PYPLHABBP Pyrus pyrifolia var. culta mRNA for light harvesting a/b binding protein, complete cds Length = 1055 Score = 65.9 bits (33), Expect = 6e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||| ||||||||||||||| | |||||||| |||||||| ||||||||||| Sbjct: 892 ccggggacgaagttggtggcgtaggcccaggcattgttgttcacggggtcggc 840
>emb|X12981.1|GMCAB3 Soybean Cab3 gene for PSII LHCII chlorophyll a/b binding protein Length = 1361 Score = 65.9 bits (33), Expect = 6e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgac 267 |||||||| ||||| |||||||||||||| | |||||||||||||||||||| Sbjct: 1044 gctcactttccggggacgaagttggtggcataggcccaggcgttgttgttgac 992
>gb|M30618.1|TOMCBPD2 Tomato chlorophyll a/b-binding protein Cab-1C gene, 3' end Length = 351 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||| |||||||| ||||| ||||| |||||||||||||||||||| || ||||| Sbjct: 351 tcactttccgggaacaaagtttgtggcaaaagcccaggcgttgttgtttactgggtc 295
>dbj|AB026686.1| Physcomitrella patens mRNA for chlorophyll a/b-binding protein precursor, complete cds Length = 964 Score = 65.9 bits (33), Expect = 6e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 839 ccgggaacgaagttggtggcgtaggcccaggcgttgttggcaacggggtcggc 787
>gb|BT015572.1| Arabidopsis thaliana At1g29910 mRNA sequence Length = 762 Score = 63.9 bits (32), Expect = 2e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||| Sbjct: 762 tcactttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcggc 703
>emb|AJ313013.1|PCO313013 Pinus contorta cab gene for chlorophyll a/b binding protein Length = 1197 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 221 ttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||| |||||||||||||| | ||||||||||||||| | ||||||||||| Sbjct: 884 ttgccggggacgaagttggtggcataggcccaggcgttgttgctaacggggtcggc 829
>gb|AY060500.1| Arabidopsis thaliana At1g29920/F1N18_80 mRNA, complete cds Length = 804 Score = 63.9 bits (32), Expect = 2e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||| Sbjct: 804 tcactttccgggaacaaagttggtggcaaaggcccaagcgttgttgttgactggatcggc 745
>gb|AF279249.1|AF279249 Vigna radiata LHCII type I chlorophyll a/b-binding protein (CipLhcb1*2) mRNA, complete cds; nuclear gene for chloroplast product Length = 932 Score = 63.9 bits (32), Expect = 2e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 233 aagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||||||| | |||||||||||||||||||| |||||||| Sbjct: 835 aagttggtggcgtaggcccaggcgttgttgttgacagggtcggc 792
>emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chlorophyll a/b-binding protein Length = 1126 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 221 ttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||| |||||||| |||||| | ||||||||||||||| |||||||||||| Sbjct: 824 ttgccggggacgaagttcgtggcgtatgcccaggcgttgttggcgacggggtcggc 769
>emb|X67714.1|PCCABA P.contorta cab gene for chlorophyll a/b binding protein Length = 2574 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 221 ttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||| |||||||||||||| | ||||||||||||||| | ||||||||||| Sbjct: 1962 ttgccggggacgaagttggtggcataggcccaggcgttgttgctaacggggtcggc 1907
>gb|AY112240.1| Zea mays CL187_6 mRNA sequence Length = 770 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 221 ttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||| |||||||| |||||| | ||||||||||||||| |||||||||||| Sbjct: 472 ttgccggggacgaagttcgtggcgtatgcccaggcgttgttggcgacggggtcggc 417
>gb|AF072931.1|AF072931 Medicago sativa chlorophyll a/b binding protein (CARCAB1) mRNA, complete cds Length = 983 Score = 63.9 bits (32), Expect = 2e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||| |||||||| ||||||||||| | ||||| |||||||||||||| |||||||| Sbjct: 852 tcactttccgggaacaaagttggtggcataggcccatgcgttgttgttgactgggtcggc 793
>gb|U51633.1|PPU51633 Pinus palustris type 1 light-harvesting chlorophyll a/b-binding polypeptide (Lhcb1) mRNA, partial cds Length = 414 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 221 ttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||| || |||||||||||||| | ||||||||||||||||| ||||||||||| Sbjct: 285 ttgccaggtacgaagttggtggcataggcccaggcgttgttgttaacggggtcggc 230
>gb|M30620.1|TOMCBPE2 Tomato chlorophyll a/b-binding protein Cab-3A gene, 3' end Length = 351 Score = 63.9 bits (32), Expect = 2e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||| |||||||| ||||| ||||| || ||||||||||||||||| || |||||||| Sbjct: 351 tcactttccgggaacaaagtttgtggcaaaggcccaggcgttgttgttaactgggtcggc 292
>gb|AY389549.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 3C (LHCP) mRNA, partial cds Length = 661 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 230 acgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||||||||||| || |||||||| |||||||||||||| ||||| Sbjct: 661 acgaagttggtggcaaacgcccaggcattgttgttgacgggatcggc 615
>gb|AC139600.16| Medicago truncatula clone mth2-20m4, complete sequence Length = 124732 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||||| ||||| || ||||| ||||| || ||||| |||||||||||||||||||| Sbjct: 219 gctcactttccggggacaaagtttgtggcaaaggcccaagcgttgttgttgacggggtc 161 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Plus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||| ||||| || ||||| |||||||| ||||| ||||||||||| || ||||| Sbjct: 8571 tcactttccggggacaaagtttgtggcgaaggcccaagcgttgttgttaactgggtc 8627
>gb|M95068.1|MZEORFI Zea mays putative light-harvesting chlorophyll A/B binding protein mRNA, partial cds Length = 191 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 221 ttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcgg 275 |||||||| |||||||| |||||| | ||||||||||||||| ||||||||||| Sbjct: 106 ttgccggggacgaagttcgtggcgtatgcccaggcgttgttggcgacggggtcgg 52
>gb|BT014208.1| Lycopersicon esculentum clone 133385R, mRNA sequence Length = 958 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 ||||| || ||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 835 ccggggacaaagtttgtggcgaaagcccaggcattgttgtttacggggtc 786
>emb|BX815776.1|CNS0AE4K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZB12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 972 Score = 60.0 bits (30), Expect = 4e-06 Identities = 55/62 (88%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcg 274 |||||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||| Sbjct: 843 gctcactttccgggaacaaagttggtggc-aaggcccaagcgttgttgttgactggatcg 785 Query: 275 gc 276 || Sbjct: 784 gc 783
>dbj|AB115771.1| Physcomitrella patens subsp. patens PpLhcb1 gene for light-harvesting chlorophyll a/b-binding protein 1, complete cds Length = 1975 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 221 ttgccgggaacgaagttggtggcgaaagcccaggcgttgttg 262 |||||||||||||||||||||||| | ||||| ||||||||| Sbjct: 1848 ttgccgggaacgaagttggtggcgtatgcccatgcgttgttg 1807
>emb|X81808.1|PALHCB1 P.abies (L.)Karst. Lhcb1*1 mRNA for light-harvesting chlorophyll a/b-binding protein Length = 1078 Score = 60.0 bits (30), Expect = 4e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||| ||||| || || |||||||||||| | |||||||||||||||||||| ||||| Sbjct: 839 ctcatttgccagggacaaagttggtggcgtaggcccaggcgttgttgttgacagggtc 782
>gb|U21111.1|STU21111 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-1) gene, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 ||||| || ||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 791 ccggggacaaagtttgtggcgaaagcccaagcgttgttgttaacggggtc 742
>gb|M14443.1|TOMCBPA Tomato chlorophyll a/b-binding protein gene Cab-1B, complete cds Length = 1253 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 ||||| || ||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 981 ccggggacaaagtttgtggcgaaagcccaggcattgttgtttacggggtc 932
>dbj|AB115772.1| Physcomitrella patens subsp. patens PpLhcb2 gene for light-harvesting chlorophyll a/b-binding protein 2, complete cds Length = 3125 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||||||||||||||| | ||||| ||||||||| ||||||||||| Sbjct: 3017 ccgggaacgaagttggtggcgtaggcccatgcgttgttggcaacggggtcggc 2965
>emb|X74732.1|AHLHAH A.hypochondriacus Lhcb2*Ah1 mRNA Length = 1152 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgtt 261 |||||| |||||||| |||||||||||| |||||||||| ||||| Sbjct: 964 tcactttccgggaacaaagttggtggcgtaagcccaggcattgtt 920
>emb|X14505.1|PSCABIIA Pinus sylvestris cab II/1A mRNA for chlorophyll a/b-binding protein Length = 1083 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||| ||||| ||||||||| | |||||||| |||||||| ||||||||||| Sbjct: 885 ccggggacgaaattggtggcgtaggcccaggcattgttgttcacggggtcggc 833
>gb|M30622.1|TOMCBPF2 Tomato chlorophyll a/b-binding protein Cab-3B gene, 3' end Length = 351 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||| |||||||| ||||| ||||| || ||||||||||||||||| || ||||| Sbjct: 351 tcactttccgggaacaaagtttgtggcaaaggcccaggcgttgttgttaactgggtc 295
>gb|M30616.1|TOMCBPC2 Tomato chlorophyll a/b-binding protein Cab-1A gene , 3' end Length = 351 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||| |||||||| ||||| ||||| || ||||||||||||||||| || ||||| Sbjct: 351 tcactttccgggaacaaagtttgtggcaaatgcccaggcgttgttgtttacagggtc 295
>ref|NM_128995.2| Arabidopsis thaliana LHB1B1; chlorophyll binding AT2G34430 (LHB1B1) mRNA, complete cds Length = 1008 Score = 56.0 bits (28), Expect = 6e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgac 267 ||||||| ||||| ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 864 ctcactttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 813
>gb|AF339687.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34430) mRNA, complete cds Length = 851 Score = 56.0 bits (28), Expect = 6e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgac 267 ||||||| ||||| ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 802 ctcactttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 751
>gb|AF326864.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34430) mRNA, complete cds Length = 1019 Score = 56.0 bits (28), Expect = 6e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgac 267 ||||||| ||||| ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 864 ctcactttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 813
>gb|AY120776.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein. (At2g34430) mRNA, complete cds Length = 1003 Score = 56.0 bits (28), Expect = 6e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgac 267 ||||||| ||||| ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 864 ctcactttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 813
>gb|AF324693.2|AF324693 Arabidopsis thaliana At2g34430 (At2g34430/T31E10.23) mRNA, complete cds Length = 1009 Score = 56.0 bits (28), Expect = 6e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgac 267 ||||||| ||||| ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 870 ctcactttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 819
>emb|BX819881.1|CNS0AA6O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS41ZH03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 638 Score = 56.0 bits (28), Expect = 6e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgac 267 ||||||| ||||| ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 522 ctcactttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 471
>gb|AY086307.1| Arabidopsis thaliana clone 23727 mRNA, complete sequence Length = 979 Score = 56.0 bits (28), Expect = 6e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgac 267 ||||||| ||||| ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 864 ctcactttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 813
>emb|Z13987.1|STCABPSII S.tuberosum gene for chlorophyll a/b-binding protein PS II type I Length = 2432 Score = 56.0 bits (28), Expect = 6e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgtt 264 |||||| |||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 1704 tcactttccgggaacaaagtttgtggcaaaagcccatgcgttgttgtt 1657
>emb|X64459.1|ATLHB1B1 A.thaliana Lhb1B1 gene for photosystem II type I chlorophyll a/b binding protein Length = 1301 Score = 56.0 bits (28), Expect = 6e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgac 267 ||||||| ||||| ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 1102 ctcactttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 1051
>gb|BT002103.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein. (At2g34430) mRNA, complete cds Length = 853 Score = 56.0 bits (28), Expect = 6e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgac 267 ||||||| ||||| ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 802 ctcactttccggggacgaagttggtagcgaaggcccatgcattgttgttgac 751
>gb|DQ252493.1| Solanum tuberosum clone 062G02 chlorophyll a-b binding protein 3C-like mRNA, complete cds Length = 1055 Score = 56.0 bits (28), Expect = 6e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 214 agctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 ||||||||| |||||||| ||||| ||||| || ||||| ||||||||||| || ||||| Sbjct: 842 agctcactttccgggaacaaagtttgtggcaaaggcccaagcgttgttgttaactgggtc 783
>gb|AY433957.1| Pyrus communis chlorophyll a/b-binding protein mRNA, partial sequence; nuclear gene for chloroplast product Length = 255 Score = 54.0 bits (27), Expect = 2e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttg 262 ||||||| ||||| |||||||||||||| |||||||||| |||||| Sbjct: 186 ctcacttcccgggcacgaagttggtggcataagcccaggcattgttg 140
>emb|AJ843976.1| Plantago major partial mRNA for light harvesting protein 1 (lhc1 gene) Length = 688 Score = 54.0 bits (27), Expect = 2e-04 Identities = 46/51 (90%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaag-cccaggcgttgttgttgacggggtc 273 |||||||||||||| ||||| |||| |||| ||||||||||| |||||||| Sbjct: 684 ccgggaacgaagtttgtggcaaaaggcccaagcgttgttgttaacggggtc 634
>gb|AF458406.1|AF458406 Brassica oleracea chlorophyll a/b binding protein (CAB1) mRNA, complete cds Length = 980 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgac 267 |||||| ||||| |||||||||||||| || ||||| || ||||||||||| Sbjct: 843 tcactttccggggacgaagttggtggcaaaggcccatgcattgttgttgac 793
>emb|BX841915.1|CNS09Y31 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL40ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 907 Score = 54.0 bits (27), Expect = 2e-04 Identities = 55/63 (87%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 215 gctcacttgccgggaacgaagttggtggcgaaagccc-aggcgttgttgttgacggggtc 273 |||||||| |||||||| |||||||| ||||| |||| | |||||||||||||| || || Sbjct: 49 gctcactttccgggaacaaagttggttgcgaaggccctatgcgttgttgttgactggatc 108 Query: 274 ggc 276 ||| Sbjct: 109 ggc 111
>dbj|AB206466.1| Adiantum capillus-veneris AcCab1 gene for chlorophyll a/b-binding protein, complete cds Length = 1500 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 232 gaagttggtggcgaaagcccaggcgttgttg 262 ||||||||||||| ||||||||||||||||| Sbjct: 1379 gaagttggtggcgtaagcccaggcgttgttg 1349
>emb|Z49749.1|PMLHCABBP P.menziesii mRNA for light-harvesting chlorophyll a/b binding protein of photosystem II Length = 772 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttg 262 |||||||||||||||||| |||||||| | |||||||| |||||| Sbjct: 707 tcacttgccgggaacgaaattggtggcataggcccaggcattgttg 662
>emb|AJ309102.1|PPI309102 Pinus pinaster partial mRNA for putative chlorophyll A-B binding protein type I Length = 684 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 221 ttgccgggaacgaagttggtggcgaaagcccaggcgttgttg 262 |||||||||||||| ||||||||| | |||||||| |||||| Sbjct: 586 ttgccgggaacgaaattggtggcgtaggcccaggcattgttg 545
>gb|U51632.1|PPU51632 Pinus palustris type 2 light-harvesting chlorophyll a/b-binding polypeptide (Lhcb2) mRNA, partial cds Length = 873 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 221 ttgccgggaacgaagttggtggcgaaagcccaggcgttgttg 262 |||||||||||||| ||||||||| | |||||||| |||||| Sbjct: 737 ttgccgggaacgaaattggtggcgtaggcccaggcattgttg 696
>gb|U21114.1|STU21114 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-5) gene, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||||| ||||| ||||| ||| ||||||||||||||| |||||||| Sbjct: 791 ccgggaacaaagtttgtggcataagaccaggcgttgttgttaacggggtc 742
>emb|AJ131044.1|CAR131044 Cicer arietinum mRNA for chlorophyll a/b binding protein Length = 983 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||| |||||||| ||||||||||| | ||||| || ||||||||||| ||||| Sbjct: 815 tcactttccgggaacaaagttggtggcataggcccatgcattgttgttgacagggtc 759
>emb|Y13865.1|BVCHLOROP Beta vulgaris mRNA for chlorophyll a/b-binding protein Length = 1036 Score = 50.1 bits (25), Expect = 0.004 Identities = 40/45 (88%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgtt 261 |||||| || ||||||||||||||||| || |||||||| ||||| Sbjct: 873 tcactttccaggaacgaagttggtggcaaaggcccaggcattgtt 829
>emb|X52741.1|NTCAB16 Tabacco Cab16 mRNA for major chlorophyll a/b binding protein Length = 1025 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||| |||||||| ||||| ||||| ||| ||||||||||||||| || ||||| Sbjct: 859 tcactttccgggaacaaagttagtggcataagaccaggcgttgttgttaaccgggtc 803
>gb|U01964.1|GMU01964 Glycine max cv. Dare photosystem II type I chlorophyll a/b-binding protein (lhcb1*7) gene, complete cds Length = 1882 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||| |||||||| ||||| ||||| ||||||| || ||||||||||| ||||| Sbjct: 1552 tcactttccgggaacaaagtttgtggcataagcccaagcattgttgttgactgggtc 1496
>gb|M21398.1|TOBCABB Tobacco chlorophyll a/b-binding protein (Cab-E) gene, complete cds Length = 1815 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||| |||||||| ||||| ||||| ||| ||||||||||||||| || ||||| Sbjct: 1779 tcactttccgggaacaaagttagtggcataagaccaggcgttgttgttaaccgggtc 1723
>gb|AF220527.1|AF220527 Euphorbia esula chlorophyll a/b binding protein precursor, mRNA, complete cds Length = 927 Score = 46.1 bits (23), Expect = 0.058 Identities = 47/55 (85%) Strand = Plus / Minus Query: 219 acttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||| ||||| ||||||||||| || |||||||| || |||||||| || ||||| Sbjct: 805 actttccggggacgaagttggtcgcaaaagcccaagcattgttgttaaccgggtc 751
>emb|X58229.1|NTCAB7 Tobacco CAB7 gene for chlorophyll a/b binding protein Length = 1656 Score = 46.1 bits (23), Expect = 0.058 Identities = 47/55 (85%) Strand = Plus / Minus Query: 219 acttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||| ||||| || ||||| ||||| | ||||||||||||||||| |||||||| Sbjct: 1303 actttccggggacaaagtttgtggcataggcccaggcgttgttgttaacggggtc 1249
>gb|AF133340.1|AF133340 Phalaenopsis sp. 'KCbutterfly' putative chlorophyll a/b-binding protein mRNA, complete cds Length = 1118 Score = 46.1 bits (23), Expect = 0.058 Identities = 41/47 (87%) Strand = Plus / Minus Query: 227 ggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 ||||| ||||||||||| ||||||||||||| ||||| || ||||| Sbjct: 877 ggaacaaagttggtggcataagcccaggcgttattgttcaccgggtc 831
>dbj|AB012640.1| Nicotiana sylvestris Lhcb1*8 gene for light harvesting chlorophyll a/b-binding protein, complete cds Length = 3102 Score = 46.1 bits (23), Expect = 0.058 Identities = 47/55 (85%) Strand = Plus / Minus Query: 219 acttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||| ||||| || ||||| ||||| | ||||||||||||||||| |||||||| Sbjct: 2706 actttccggggacaaagtttgtggcataggcccaggcgttgttgttaacggggtc 2652
>ref|NM_113685.3| Arabidopsis thaliana LHCB2:4; chlorophyll binding AT3G27690 (LHCB2:4) mRNA, complete cds Length = 946 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgtt 261 ||||| ||||||||||||||| ||||||| || ||||| Sbjct: 849 ccggggacgaagttggtggcgtaagcccaagcattgtt 812
>gb|DQ226800.1| Boechera divaricarpa isolate SLW-B-D01 mRNA sequence Length = 510 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgtt 261 ||||| ||||||||||||||| ||||||| || ||||| Sbjct: 402 ccggggacgaagttggtggcgtaagcccaagcattgtt 365
>gb|AY288914.1| Brassica oleracea chlorophyll a/b binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1042 Score = 44.1 bits (22), Expect = 0.23 Identities = 40/46 (86%) Strand = Plus / Minus Query: 219 acttgccgggaacgaagttggtggcgaaagcccaggcgttgttgtt 264 |||| ||||||||||||||||| || || ||||| || |||||||| Sbjct: 874 actttccgggaacgaagttggtagcaaaggcccatgcattgttgtt 829
>gb|BT006298.1| Arabidopsis thaliana At3g27700 mRNA, complete cds Length = 801 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgtt 261 ||||| ||||||||||||||| ||||||| || ||||| Sbjct: 794 ccggggacgaagttggtggcgtaagcccaagcattgtt 757
>gb|AF370557.1|AF370557 Arabidopsis thaliana light harvesting chlorophyll a/b-binding protein (MGF10.9) mRNA, complete cds Length = 917 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgtt 261 ||||| ||||||||||||||| ||||||| || ||||| Sbjct: 843 ccggggacgaagttggtggcgtaagcccaagcattgtt 806
>gb|AY088541.1| Arabidopsis thaliana clone 7700 mRNA, complete sequence Length = 917 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgtt 261 ||||| ||||||||||||||| ||||||| || ||||| Sbjct: 843 ccggggacgaagttggtggcgtaagcccaagcattgtt 806
>gb|AF134125.1| Arabidopsis thaliana Lhcb2 protein (Lhcb2:4) mRNA, complete cds Length = 897 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgtt 261 ||||| ||||||||||||||| ||||||| || ||||| Sbjct: 799 ccggggacgaagttggtggcgtaagcccaagcattgtt 762
>dbj|AB018114.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGF10 Length = 84702 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgtt 261 ||||| ||||||||||||||| ||||||| || ||||| Sbjct: 31775 ccggggacgaagttggtggcgtaagcccaagcattgtt 31738
>gb|AY104614.1| Zea mays PCO084486 mRNA sequence Length = 1214 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 255 cgttgttgttgacggggtcggc 276 |||||||||||||||||||||| Sbjct: 955 cgttgttgttgacggggtcggc 934
>gb|U21112.1|STU21112 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-3 gene, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 44.1 bits (22), Expect = 0.23 Identities = 43/50 (86%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 ||||| || ||||| ||||| ||| ||||||||||||||| |||||||| Sbjct: 791 ccggggacaaagtttgtggcataagaccaggcgttgttgttaacggggtc 742
>emb|AJ318069.1|STU318069 Solanum tuberosum mRNA for ferredoxin-thioredoxin-reductase catalytic subunit B (ftrbpot gene) Length = 701 Score = 44.1 bits (22), Expect = 0.23 Identities = 44/50 (88%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 ||||| || ||||| |||||||||||| || |||||||||| |||||||| Sbjct: 6 ccggggacaaagtttgtggcgaaagccaag-cgttgttgttaacggggtc 54
>gb|M14449.1|TOMCBPG Tomato chlorophyll a/b-binding protein gene Cab-1D, complete cds Length = 351 Score = 44.1 bits (22), Expect = 0.23 Identities = 43/50 (86%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||||| ||||| |||||| | | ||||||||||||||| || ||||| Sbjct: 344 ccgggaacaaagttagtggcgtaggaccaggcgttgttgtttactgggtc 295
>gb|M16058.1|CUSLHCPB Cucumber LHCP mRNA encoding chlorophyll a/b-binding protein, partial cds Length = 748 Score = 44.1 bits (22), Expect = 0.23 Identities = 49/58 (84%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 ||||||| |||||||| ||||| ||||| | ||||| || ||||||||||| ||||| Sbjct: 624 ctcactttccgggaacaaagtttgtggcatatgcccaagcattgttgttgactgggtc 567
>ref|XM_478729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 42.1 bits (21), Expect = 0.91 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 ttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||| | |||||||||||||| |||||||||||| Sbjct: 816 ttggtggcgtagacccaggcgttgttggcgacggggtcggc 776
>ref|XM_507374.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 995 Score = 42.1 bits (21), Expect = 0.91 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 ttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||| | |||||||||||||| |||||||||||| Sbjct: 840 ttggtggcgtagacccaggcgttgttggcgacggggtcggc 800
>ref|XM_507373.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1007 Score = 42.1 bits (21), Expect = 0.91 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 ttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||| | |||||||||||||| |||||||||||| Sbjct: 840 ttggtggcgtagacccaggcgttgttggcgacggggtcggc 800
>ref|XM_507372.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1108 Score = 42.1 bits (21), Expect = 0.91 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 ttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||| | |||||||||||||| |||||||||||| Sbjct: 842 ttggtggcgtagacccaggcgttgttggcgacggggtcggc 802
>ref|XM_507371.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1000 Score = 42.1 bits (21), Expect = 0.91 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 ttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||| | |||||||||||||| |||||||||||| Sbjct: 845 ttggtggcgtagacccaggcgttgttggcgacggggtcggc 805
>ref|XM_507370.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1012 Score = 42.1 bits (21), Expect = 0.91 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 ttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||| | |||||||||||||| |||||||||||| Sbjct: 845 ttggtggcgtagacccaggcgttgttggcgacggggtcggc 805
>ref|XM_507369.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1032 Score = 42.1 bits (21), Expect = 0.91 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 ttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||| | |||||||||||||| |||||||||||| Sbjct: 847 ttggtggcgtagacccaggcgttgttggcgacggggtcggc 807
>ref|XM_506410.2| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1159 Score = 42.1 bits (21), Expect = 0.91 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 ttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||| | |||||||||||||| |||||||||||| Sbjct: 880 ttggtggcgtagacccaggcgttgttggcgacggggtcggc 840
>ref|NM_001032032.1| Drosophila melanogaster held out wings CG10293-RC, transcript variant C (how), mRNA Length = 4030 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 cacatgcaaaatctatcagtc 127 ||||||||||||||||||||| Sbjct: 3603 cacatgcaaaatctatcagtc 3623
>gb|AC007114.8| Homo sapiens chromosome 17, clone RP11-166P13, complete sequence Length = 148781 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 aatctgaaaaataaccagata 48 ||||||||||||||||||||| Sbjct: 112377 aatctgaaaaataaccagata 112397
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 0.91 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 ttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||| | |||||||||||||| |||||||||||| Sbjct: 22434853 ttggtggcgtagacccaggcgttgttggcgacggggtcggc 22434813
>gb|AC008144.5|AC008144 Drosophila melanogaster, chromosome 3R, region 93F-93F, BAC clone BACR04F21, complete sequence Length = 171226 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 cacatgcaaaatctatcagtc 127 ||||||||||||||||||||| Sbjct: 66845 cacatgcaaaatctatcagtc 66825
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 42.1 bits (21), Expect = 0.91 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 ttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||| | |||||||||||||| |||||||||||| Sbjct: 95920 ttggtggcgtagacccaggcgttgttggcgacggggtcggc 95880
>dbj|AK109399.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C08, full insert sequence Length = 1111 Score = 42.1 bits (21), Expect = 0.91 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 ttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||| | |||||||||||||| |||||||||||| Sbjct: 845 ttggtggcgtagacccaggcgttgttggcgacggggtcggc 805
>dbj|AK119545.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G05, full insert sequence Length = 1012 Score = 42.1 bits (21), Expect = 0.91 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 ttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||| | |||||||||||||| |||||||||||| Sbjct: 845 ttggtggcgtagacccaggcgttgttggcgacggggtcggc 805
>dbj|AK119533.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F03, full insert sequence Length = 1000 Score = 42.1 bits (21), Expect = 0.91 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 ttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||| | |||||||||||||| |||||||||||| Sbjct: 845 ttggtggcgtagacccaggcgttgttggcgacggggtcggc 805
>emb|X52742.1|NTCAB50 Tabacco Cab50 mRNA for major chlorophyll a/b binding protein Length = 964 Score = 42.1 bits (21), Expect = 0.91 Identities = 48/57 (84%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||| ||||| || |||||||||||| | | |||||| |||||||| || ||||| Sbjct: 871 tcactttccggggacaaagttggtggcgtaggaccaggcattgttgttaactgggtc 815
>dbj|AK104495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C03, full insert sequence Length = 973 Score = 42.1 bits (21), Expect = 0.91 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 ttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||| | |||||||||||||| |||||||||||| Sbjct: 816 ttggtggcgtagacccaggcgttgttggcgacggggtcggc 776
>dbj|AK104465.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C07, full insert sequence Length = 1012 Score = 42.1 bits (21), Expect = 0.91 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 ttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||| | |||||||||||||| |||||||||||| Sbjct: 845 ttggtggcgtagacccaggcgttgttggcgacggggtcggc 805
>dbj|AK104224.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E11, full insert sequence Length = 995 Score = 42.1 bits (21), Expect = 0.91 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 ttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||| | |||||||||||||| |||||||||||| Sbjct: 840 ttggtggcgtagacccaggcgttgttggcgacggggtcggc 800
>dbj|AK103999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D10, full insert sequence Length = 1007 Score = 42.1 bits (21), Expect = 0.91 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 ttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||| | |||||||||||||| |||||||||||| Sbjct: 840 ttggtggcgtagacccaggcgttgttggcgacggggtcggc 800
>dbj|AK103926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D02, full insert sequence Length = 1000 Score = 42.1 bits (21), Expect = 0.91 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 ttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||| | |||||||||||||| |||||||||||| Sbjct: 845 ttggtggcgtagacccaggcgttgttggcgacggggtcggc 805
>dbj|AK068972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G03, full insert sequence Length = 1107 Score = 42.1 bits (21), Expect = 0.91 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 ttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||| | |||||||||||||| |||||||||||| Sbjct: 841 ttggtggcgtagacccaggcgttgttggcgacggggtcggc 801
>dbj|AK061512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G12, full insert sequence Length = 1032 Score = 42.1 bits (21), Expect = 0.91 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 ttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||||||| | |||||||||||||| |||||||||||| Sbjct: 847 ttggtggcgtagacccaggcgttgttggcgacggggtcggc 807
>gb|AE003737.3| Drosophila melanogaster chromosome 3R, section 75 of 118 of the complete sequence Length = 178251 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 cacatgcaaaatctatcagtc 127 ||||||||||||||||||||| Sbjct: 119539 cacatgcaaaatctatcagtc 119559
>gb|AF005849.1|AF005849 Drosophila melanogaster anon1F4 pseudogene, partial sequence Length = 2329 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 cacatgcaaaatctatcagtc 127 ||||||||||||||||||||| Sbjct: 1902 cacatgcaaaatctatcagtc 1922
>gb|AF003129.1|AF003129 Mesembryanthemum crystallinum chlorophyll a/b-binding protein (CAB3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1011 Score = 42.1 bits (21), Expect = 0.91 Identities = 48/57 (84%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 ||||||||||||| | ||||| || ||||| ||||| || |||||||| || ||||| Sbjct: 860 tcacttgccgggagcaaagtttgtagcgaaggcccaagcattgttgttaactgggtc 804
>gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein gene, complete cds Length = 1191 Score = 42.1 bits (21), Expect = 0.91 Identities = 45/53 (84%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||| |||||||||||||| | ||| |||||||||||||| |||||||| Sbjct: 994 ccgggcacgaagttggtggcaatgagccacgcgttgttgttgacagggtcggc 942
>gb|L07119.1|COTIIABINA Gossypium hirsutum chloroplast photosystem II chlorophyll A/B-binding protein gene, complete cds Length = 1260 Score = 42.1 bits (21), Expect = 0.91 Identities = 48/57 (84%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||| ||||| || ||||||||||| | ||||| || ||||||||||| ||||| Sbjct: 992 tcactttccggggacaaagttggtggcataggcccaagcattgttgttgactgggtc 936
>dbj|AB012638.1| Nicotiana sylvestris Lhcb1*5, Lhcb1*6 genes for light harvesting chlorophyll a/b-binding protein, complete cds Length = 7299 Score = 42.1 bits (21), Expect = 0.91 Identities = 48/57 (84%) Strand = Plus / Plus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtc 273 |||||| |||||||| ||||| ||||| | ||||| ||||||||||| || ||||| Sbjct: 1870 tcactttccgggaacaaagtttgtggcataggcccaagcgttgttgttaactgggtc 1926
>ref|NM_128200.3| Arabidopsis thaliana RCY1; cyclin-dependent protein kinase regulator AT2G26430 (RCY1) mRNA, complete cds Length = 1583 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 8 agaagaaagatgccttgattaatctgaa 35 ||||||| |||||||||||| ||||||| Sbjct: 1318 agaagaatgatgccttgatttatctgaa 1291
>gb|AC093365.10| Mus musculus chromosome 3, clone RP23-60O16, complete sequence Length = 236143 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 agcatccatcagcaatgaag 168 |||||||||||||||||||| Sbjct: 112171 agcatccatcagcaatgaag 112152
>gb|AC163991.3| Mus musculus chromosome 15, clone RP24-119L11, complete sequence Length = 152173 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 catgcagcacagcagcatcc 155 |||||||||||||||||||| Sbjct: 34686 catgcagcacagcagcatcc 34667
>gb|AY150419.1| Arabidopsis thaliana putative cyclin (At2g26430) mRNA, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 8 agaagaaagatgccttgattaatctgaa 35 ||||||| |||||||||||| ||||||| Sbjct: 1200 agaagaatgatgccttgatttatctgaa 1173
>gb|AY091085.1| Arabidopsis thaliana putative cyclin (At2g26430) mRNA, complete cds Length = 1537 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 8 agaagaaagatgccttgattaatctgaa 35 ||||||| |||||||||||| ||||||| Sbjct: 1314 agaagaatgatgccttgatttatctgaa 1287
>emb|CR626890.8| Zebrafish DNA sequence from clone DKEY-83J7 in linkage group 15, complete sequence Length = 211127 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cagcacagcagcatccatca 159 |||||||||||||||||||| Sbjct: 84374 cagcacagcagcatccatca 84393
>emb|BX324206.6| Zebrafish DNA sequence from clone CH211-66O10 in linkage group 15, complete sequence Length = 164638 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cagcacagcagcatccatca 159 |||||||||||||||||||| Sbjct: 139671 cagcacagcagcatccatca 139690
>gb|AF249734.1| Arabidopsis thaliana ania-6a type cyclin (RCY1) mRNA, complete cds Length = 1433 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 8 agaagaaagatgccttgattaatctgaa 35 ||||||| |||||||||||| ||||||| Sbjct: 1213 agaagaatgatgccttgatttatctgaa 1186
>emb|BX324151.11| Zebrafish DNA sequence from clone CH211-62C19 in linkage group 15, complete sequence Length = 182149 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cagcacagcagcatccatca 159 |||||||||||||||||||| Sbjct: 30941 cagcacagcagcatccatca 30960
>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 Length = 2039961 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 tgtacacacaccaactcatc 91 |||||||||||||||||||| Sbjct: 133595 tgtacacacaccaactcatc 133576
>gb|AC002505.3| Arabidopsis thaliana chromosome 2 clone T9J22 map B68, complete sequence Length = 115851 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 8 agaagaaagatgccttgattaatctgaa 35 ||||||| |||||||||||| ||||||| Sbjct: 29149 agaagaatgatgccttgatttatctgaa 29176
>ref|XM_686371.1| PREDICTED: Danio rerio similar to endothelial cell adhesion molecule (LOC563007), mRNA Length = 1350 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cagcacagcagcatccatca 159 |||||||||||||||||||| Sbjct: 223 cagcacagcagcatccatca 204
>gb|AC156618.5| Mus musculus chromosome 3, clone RP24-372J15, complete sequence Length = 171545 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 agacatgcagcacagcagca 152 |||||||||||||||||||| Sbjct: 23011 agacatgcagcacagcagca 22992
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 tgcagcacagcagcatccat 157 |||||||||||||||||||| Sbjct: 18990787 tgcagcacagcagcatccat 18990768
>emb|BX819076.1|CNS0A9W0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB43ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1513 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 8 agaagaaagatgccttgattaatctgaa 35 ||||||| |||||||||||| ||||||| Sbjct: 1313 agaagaatgatgccttgatttatctgaa 1286
>gb|AC114311.3| Homo sapiens chromosome 5 clone RP11-2N5, complete sequence Length = 96123 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ttgattaatctgaaaaataa 41 |||||||||||||||||||| Sbjct: 50377 ttgattaatctgaaaaataa 50396
>gb|AC092915.7| Homo sapiens 3 BAC RP11-585F20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187215 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 tctttttagtgtacacacac 82 |||||||||||||||||||| Sbjct: 75284 tctttttagtgtacacacac 75303
>gb|AY086218.1| Arabidopsis thaliana clone 22595 mRNA, complete sequence Length = 1583 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 8 agaagaaagatgccttgattaatctgaa 35 ||||||| |||||||||||| ||||||| Sbjct: 1318 agaagaatgatgccttgatttatctgaa 1291
>dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0009J19 Length = 156988 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 tgcagcacagcagcatccat 157 |||||||||||||||||||| Sbjct: 83457 tgcagcacagcagcatccat 83438
>gb|AC010582.6|AC010582 Homo sapiens chromosome 14 clone CTD-2547F10, complete sequence Length = 191549 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 gaagaagaaagatgccttga 25 |||||||||||||||||||| Sbjct: 102507 gaagaagaaagatgccttga 102526
>emb|X02356.1|PECAB91R Petunia gene for chlorophyll a/b binding protein cab 91R Length = 1173 Score = 40.1 bits (20), Expect = 3.6 Identities = 50/60 (83%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||| ||||| || ||||| || ||| ||| ||| ||||||||||| || |||||||| Sbjct: 1034 tcactttccggggacaaagttagttgcgtaagaccatgcgttgttgttaactgggtcggc 975
>emb|X56538.1|PSCABIIC P.sativum Cab-8 gene for photosystemm II chlorophyll a/b binding protein Length = 2236 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 216 ctcacttgccgggaacgaagttggtggc 243 ||||||| |||||||| ||||||||||| Sbjct: 2118 ctcactttccgggaacaaagttggtggc 2091
>emb|X81810.1|PALHCB122 P.abies (L.)Karst. Lhcb1*2-2 mRNA for light-harvesting chlorophyll a/b-binding protein Length = 1050 Score = 40.1 bits (20), Expect = 3.6 Identities = 47/56 (83%) Strand = Plus / Minus Query: 221 ttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||| || |||||||| || ||| | ||||||||||||||| | || |||||||| Sbjct: 848 ttgcctgggacgaagttagtagcgtaggcccaggcgttgttggtaaccgggtcggc 793
>emb|X81809.1|PALHCB12 P.abies (L.)Karst. Lhcb1*2-1 mRNA for light-harvesting chlorophyll a/b-binding protein Length = 1062 Score = 40.1 bits (20), Expect = 3.6 Identities = 47/56 (83%) Strand = Plus / Minus Query: 221 ttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 ||||| || |||||||| || ||| | ||||||||||||||| | || |||||||| Sbjct: 845 ttgcctgggacgaagttagtagcgtaggcccaggcgttgttggtaaccgggtcggc 790
>gb|AC102905.9| Mus musculus chromosome 15, clone RP24-303N12, complete sequence Length = 153799 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 catgcagcacagcagcatcc 155 |||||||||||||||||||| Sbjct: 130651 catgcagcacagcagcatcc 130632
>emb|AL772198.14| Zebrafish DNA sequence from clone CH211-194D6 in linkage group 9, complete sequence Length = 211682 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 atgcagcacagcagcatccatcag 160 |||||||||| ||||||||||||| Sbjct: 25016 atgcagcacatcagcatccatcag 25039
>gb|K00975.1|PETCAB10 Petunia major chlorophyll a/b binding protein (Cab) clone pCab10, 3' end and flank Length = 367 Score = 40.1 bits (20), Expect = 3.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgtt 264 |||||| |||||||| ||||| |||||| | | ||| ||||||||||| Sbjct: 231 tcactttccgggaacaaagtttgtggcgtaggaccaagcgttgttgtt 184
>emb|AL136040.5|CNS01DVV Human chromosome 14 DNA sequence BAC C-2506P8 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 199420 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 gaagaagaaagatgccttga 25 |||||||||||||||||||| Sbjct: 97531 gaagaagaaagatgccttga 97512
>gb|AC104874.11| Mus musculus chromosome 3, clone RP23-453I14, complete sequence Length = 182940 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 agacatgcagcacagcagca 152 |||||||||||||||||||| Sbjct: 165644 agacatgcagcacagcagca 165625
>emb|AL935316.7| Zebrafish DNA sequence from clone CH211-239C9 in linkage group 3, complete sequence Length = 174887 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cagcacagcagcatccatca 159 |||||||||||||||||||| Sbjct: 83612 cagcacagcagcatccatca 83631
>gb|AF005850.1|AF005850 Drosophila yakuba anon1F4 pseudogene, partial sequence Length = 1611 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 cacatgcaaaatctatcagt 126 |||||||||||||||||||| Sbjct: 1118 cacatgcaaaatctatcagt 1137
>dbj|AP004488.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT02F05, TM0020, complete sequence Length = 80920 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 atctgaaaaataaccagata 48 |||||||||||||||||||| Sbjct: 66789 atctgaaaaataaccagata 66808
>emb|AL671899.11| Mouse DNA sequence from clone RP23-27B23 on chromosome 3, complete sequence Length = 132775 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 agcatccatcagcaatgaag 168 |||||||||||||||||||| Sbjct: 83804 agcatccatcagcaatgaag 83785
>gb|U20983.1|STU20983 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-2) gene, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 40.1 bits (20), Expect = 3.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 224 ccgggaacgaagttggtggcgaaagcccaggcgttgttgttgac 267 |||||||| ||||| ||||| || ||||| || ||||||||||| Sbjct: 791 ccgggaacaaagtttgtggcaaaggcccatgcattgttgttgac 748
>gb|J01253.1|PEACAB15 Pea major chlorophyll a/b-binding thylakoid protein (polypeptide 15) mRNA, clone pAB96 Length = 822 Score = 40.1 bits (20), Expect = 3.6 Identities = 50/60 (83%) Strand = Plus / Minus Query: 217 tcacttgccgggaacgaagttggtggcgaaagcccaggcgttgttgttgacggggtcggc 276 |||||| |||||||| |||||||| || | | ||| ||||||||||| || |||||||| Sbjct: 688 tcactttccgggaacaaagttggtagcatatgaccatgcgttgttgttcactgggtcggc 629 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,581,678 Number of Sequences: 3902068 Number of extensions: 2581678 Number of successful extensions: 49364 Number of sequences better than 10.0: 249 Number of HSP's better than 10.0 without gapping: 246 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 48949 Number of HSP's gapped (non-prelim): 415 length of query: 276 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 254 effective length of database: 17,147,199,772 effective search space: 4355388742088 effective search space used: 4355388742088 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)