ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet30c02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PEX10_ARATH (Q9SYU4) Peroxisome assembly protein 10 (Peroxin-10)... 30 1.5

>PEX10_ARATH (Q9SYU4) Peroxisome assembly protein 10 (Peroxin-10) (AthPEX10)|
           (Pex10p) (PER8)
          Length = 381

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 308 PGRGGDSGGID-VELALQPEPMQRLEKDDEF 219
           PG  G  GGI    LA QPE M+  EKDD++
Sbjct: 14  PGSSGFHGGIRRFPLAAQPEIMRAAEKDDQY 44


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,635,995
Number of Sequences: 219361
Number of extensions: 628400
Number of successful extensions: 1210
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 80,573,946
effective HSP length: 84
effective length of database: 62,147,622
effective search space used: 1491542928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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