Clone Information

BLAST Search Result

Clone Name	rbaet30a04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	MYCT_RAT (Q921A2) Proton myo-inositol cotransporter (H(+)-myo-in...	37	0.011
2	MYCT_HUMAN (Q96QE2) Proton myo-inositol cotransporter (H(+)-myo-...	37	0.011
3	QUTD_EMENI (P15325) Quinate permease (Quinate transporter)	30	1.1
4	GTR6_HUMAN (Q9UGQ3) Solute carrier family 2, facilitated glucose...	30	1.1
5	UL79_HCMVA (P16752) Protein UL79	30	1.1
6	ZAN_MOUSE (O88799) Zonadhesin precursor	30	1.4
7	GTR3_SHEEP (P47843) Solute carrier family 2, facilitated glucose...	30	1.4
8	GTR3_BOVIN (P58352) Solute carrier family 2, facilitated glucose...	30	1.4
9	ENGA_SYNPX (Q7U8G2) GTP-binding protein engA	30	1.4
10	FOXGA_HUMAN (P55316) Forkhead box protein G1A (Forkhead-related ...	29	2.4
11	GTR3_RABIT (Q9XSC2) Solute carrier family 2, facilitated glucose...	29	3.1
12	XYLE_ECOLI (P0AGF4) D-xylose-proton symporter (D-xylose transpor...	29	3.1
13	XYLE_ECO57 (P0AGF5) D-xylose-proton symporter (D-xylose transpor...	29	3.1
14	QAY_NEUCR (P11636) Quinate permease (Quinate transporter)	29	3.1
15	ZAN_PIG (Q28983) Zonadhesin precursor	28	4.0
16	ISPD_SYNY3 (P74323) 2-C-methyl-D-erythritol 4-phosphate cytidyly...	28	4.0
17	CWC25_CRYNE (Q5KIP8) Pre-mRNA-splicing factor CWC25	28	4.0
18	HXT16_YEAST (P47185) Hexose transporter HXT16	28	4.0
19	GTR10_HUMAN (O95528) Solute carrier family 2, facilitated glucos...	28	4.0
20	GASR_BOVIN (P79266) Gastrin/cholecystokinin type B receptor (CCK...	28	4.0
21	GASR_CANFA (P30552) Gastrin/cholecystokinin type B receptor (CCK...	28	5.3
22	GASR_HUMAN (P32239) Gastrin/cholecystokinin type B receptor (CCK...	28	5.3
23	FOXGB_HUMAN (P55315) Forkhead box protein G1B (Forkhead-related ...	28	5.3
24	VGLB_EHV1 (P18050) Glycoprotein B precursor (Glycoprotein 14)	28	5.3
25	FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead...	28	5.3
26	HMX_STRPU (Q26656) Homeobox protein Hmx (SpHmx) (H6-like) (Fragm...	28	5.3
27	FOXL2_HUMAN (P58012) Forkhead box protein L2	28	5.3
28	GTR14_HUMAN (Q8TDB8) Solute carrier family 2, facilitated glucos...	28	6.9
29	GASR_MOUSE (P56481) Gastrin/cholecystokinin type B receptor (CCK...	28	6.9
30	GTR3_CANFA (P47842) Solute carrier family 2, facilitated glucose...	28	6.9
31	GASR_RAT (P30553) Gastrin/cholecystokinin type B receptor (CCK-B...	28	6.9
32	GASR_RABIT (P46627) Gastrin/cholecystokinin type B receptor (CCK...	28	6.9
33	GASR_PRANA (P30796) Gastrin/cholecystokinin type B receptor (CCK...	28	6.9
34	GTR3_PONPY (Q5R608) Solute carrier family 2, facilitated glucose...	28	6.9
35	GTR3_HUMAN (P11169) Solute carrier family 2, facilitated glucose...	28	6.9
36	ASH1_YEAST (P34233) Daughter cells HO repressor protein ASH1	28	6.9
37	UCRH_RAT (Q5M9I5) Ubiquinol-cytochrome c reductase complex 11 kD...	27	9.0
38	UCRH_MOUSE (P99028) Ubiquinol-cytochrome c reductase complex 11 ...	27	9.0
39	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	27	9.0

>MYCT_RAT (Q921A2) Proton myo-inositol cotransporter (H(+)-myo-inositol|
           cotransporter) (Hmit)
          Length = 618

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
 Frame = -3

Query: 394 YASIAAAGWVFMFCFLPETRGEGLEDTEKLFG------GTGDAVE 278
           YA  AA G +F++  LPET+G+ LE+ E LF       GT D+ E
Sbjct: 549 YAGFAAVGLLFVYGCLPETKGKKLEEIESLFDHRLCTCGTADSDE 593

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>MYCT_HUMAN (Q96QE2) Proton myo-inositol cotransporter (H(+)-myo-inositol|
           cotransporter) (Hmit)
          Length = 629

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
 Frame = -3

Query: 394 YASIAAAGWVFMFCFLPETRGEGLEDTEKLFG------GTGDAVE 278
           YA  AA G +F++  LPET+G+ LE+ E LF       GT D+ E
Sbjct: 560 YAGFAAVGLLFIYGCLPETKGKKLEEIESLFDNRLCTCGTSDSDE 604

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>QUTD_EMENI (P15325) Quinate permease (Quinate transporter)|
          Length = 533

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 394 YASIAAAGWVFMFCFLPETRGEGLEDTEKLF 302
           +AS+     VF+F  +PET+G  LE  E LF
Sbjct: 460 FASLMILSIVFVFFLIPETKGVPLESMETLF 490

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>GTR6_HUMAN (Q9UGQ3) Solute carrier family 2, facilitated glucose transporter|
           member 6 (Glucose transporter type 6) (Glucose
           transporter type 9)
          Length = 507

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 394 YASIAAAGWVFMFCFLPETRGEGLEDTEKLF 302
           +A+I     VF  C +PET+G  LE  E  F
Sbjct: 468 FAAICLVSLVFTGCCVPETKGRSLEQIESFF 498

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>UL79_HCMVA (P16752) Protein UL79|
          Length = 295

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 244 AWTWHAHAHLPSPRHRQYHRRASPCPPDLRPSS 342
           A T   H H P P+ +Q+H    P PP   P+S
Sbjct: 240 AGTLSRHPHRPHPQQQQHHHPGPPHPPLSHPAS 272

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>ZAN_MOUSE (O88799) Zonadhesin precursor|
          Length = 5376

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +1

Query: 190  RPLTVYHIQC*LTTE*STAWTWHAHAHLPSPRHRQYHRRASPCP 321
            R L+ Y I C       T W  H H  +  P +  Y R  +PCP
Sbjct: 5121 RVLSGYAIICQEAGANMTGWRDHTHCAMTCPANTVYQRCMTPCP 5164

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>GTR3_SHEEP (P47843) Solute carrier family 2, facilitated glucose transporter|
           member 3 (Glucose transporter type 3, brain)
          Length = 494

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = -3

Query: 370 WVFMFCFLPETRGEGLEDTEKLFGG---TGDAVEK 275
           WVF F  +PETRG   E+  + F G   TG   EK
Sbjct: 443 WVFTFFKVPETRGRTFEEITRAFEGQVQTGTRGEK 477

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>GTR3_BOVIN (P58352) Solute carrier family 2, facilitated glucose transporter|
           member 3 (Glucose transporter type 3, brain)
          Length = 494

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = -3

Query: 370 WVFMFCFLPETRGEGLEDTEKLFGG---TGDAVEK 275
           WVF F  +PETRG   E+  + F G   TG   EK
Sbjct: 443 WVFTFFKVPETRGRTFEEITRAFEGQTQTGTRGEK 477

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>ENGA_SYNPX (Q7U8G2) GTP-binding protein engA|
          Length = 455

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +2

Query: 248 GLGMPMLIFLLHGIASTTEELLRVLQTFAPRLRQEAEHEHP 370
           GLG P  I  +HG+   T +LL  + TF P   QE + E P
Sbjct: 139 GLGEPHPISAIHGVG--TGDLLDQVLTFLPPKDQEGDEEEP 177

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>FOXGA_HUMAN (P55316) Forkhead box protein G1A (Forkhead-related protein FKHL2)|
           (Transcription factor BF-2) (Brain factor 2) (BF2)
           (HFK2)
          Length = 469

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = +1

Query: 256 HAHAHLPSPRHRQYHRRASPCPPDLRPSSPAGSRT*TPTRRQLCWRR 396
           H ++H P   H  +H    P PP  +P  P   +   P  R+   RR
Sbjct: 39  HHNSHHPQHHHHHHHHHHHPPPPAPQPPPPPQQQQPPPPPRRGARRR 85

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>GTR3_RABIT (Q9XSC2) Solute carrier family 2, facilitated glucose transporter|
           member 3 (Glucose transporter type 3, brain) (Fragment)
          Length = 400

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 394 YASIAAAGWVFMFCFLPETRGEGLEDTEKLFGGTGDAVEK 275
           +A    A ++F F  +PETRG   ED  + F G      K
Sbjct: 340 FAVFLVAFFIFTFFKVPETRGRTFEDITRAFEGQAAEANK 379

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>XYLE_ECOLI (P0AGF4) D-xylose-proton symporter (D-xylose transporter)|
          Length = 491

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -3

Query: 394 YASIAAAGWVFMFCFLPETRGEGLEDTEKLF 302
           Y  +     +FM+ F+PET+G+ LE+ E L+
Sbjct: 448 YGCMGVLAALFMWKFVPETKGKTLEELEALW 478

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>XYLE_ECO57 (P0AGF5) D-xylose-proton symporter (D-xylose transporter)|
          Length = 491

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -3

Query: 394 YASIAAAGWVFMFCFLPETRGEGLEDTEKLF 302
           Y  +     +FM+ F+PET+G+ LE+ E L+
Sbjct: 448 YGCMGVLAALFMWKFVPETKGKTLEELEALW 478

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>QAY_NEUCR (P11636) Quinate permease (Quinate transporter)|
          Length = 537

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 394 YASIAAAGWVFMFCFLPETRGEGLEDTEKLF 302
           +AS+     VF++ FLPET+   LE  ++LF
Sbjct: 464 FASLMLLSIVFIYFFLPETKSIPLEAMDRLF 494

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>ZAN_PIG (Q28983) Zonadhesin precursor|
          Length = 2476

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +1

Query: 196  LTVYHIQC*LTTE*STAWTWHAHAHLPSPRHRQYHRRASPCP 321
            L+ Y I C  +      W  H H  LP P +  Y    +PCP
Sbjct: 2230 LSGYAIICQESGPTLAGWRDHTHCALPCPANTVYQSCMTPCP 2271

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>ISPD_SYNY3 (P74323) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|
           (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol
           synthase) (MEP cytidylyltransferase) (MCT)
          Length = 230

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = -2

Query: 365 VHVLLPAGDEGRRSG-GHGEALRWYWRCRGEGR*AWACQVHAVDYSVVSQHCMWYTVSGR 189
           +H+L+PA   G+R G GH + L       G+   +W  Q      ++ SQ   W  + G+
Sbjct: 1   MHLLIPAAGSGKRMGSGHNKLL---LNVLGQPLLSWTVQA-----ALASQSIEWIGIMGQ 52

Query: 188 P 186
           P
Sbjct: 53  P 53

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>CWC25_CRYNE (Q5KIP8) Pre-mRNA-splicing factor CWC25|
          Length = 434

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 271 LPSPRHRQYHRRASPCPPDLRPSSPAGS 354
           +P PRH  Y+       PD+RPSSP  S
Sbjct: 318 IPPPRHLSYNHST----PDVRPSSPPSS 341

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>HXT16_YEAST (P47185) Hexose transporter HXT16|
          Length = 567

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -3

Query: 394 YASIAAAGWVFMFCFLPETRGEGLEDTEKLF 302
           +     A ++++F FLPET G  LE+T+ L+
Sbjct: 494 FVGCLVAMFLYVFFFLPETIGLSLEETQLLY 524

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>GTR10_HUMAN (O95528) Solute carrier family 2, facilitated glucose transporter|
           member 10 (Glucose transporter type 10)
          Length = 541

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -3

Query: 394 YASIAAAGWVFMFCFLPETRGEGLEDTEKLF 302
           Y   A  G  F++ F+PET+G+ L + ++ F
Sbjct: 482 YGLTAVLGLGFIYLFVPETKGQSLAEIDQQF 512

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>GASR_BOVIN (P79266) Gastrin/cholecystokinin type B receptor (CCK-B receptor)|
           (CCK-BR) (Cholecystokinin-2 receptor) (CCK2-R)
          Length = 454

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 357 SASCRRRGAKVWRTRRSSSVVLAMPWRRKMSMGMPSP 247
           SA CR   A+VW+TR  ++ V+   W     + +P P
Sbjct: 154 SAICRPLQARVWQTRSHAARVIVATWMLSGLLMVPYP 190

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>GASR_CANFA (P30552) Gastrin/cholecystokinin type B receptor (CCK-B receptor)|
           (CCK-BR) (Cholecystokinin-2 receptor) (CCK2-R)
          Length = 453

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 357 SASCRRRGAKVWRTRRSSSVVLAMPWRRKMSMGMPSP 247
           SA CR   A+VW+TR  ++ V+   W     + +P P
Sbjct: 154 SAICRPLQARVWQTRSHAARVIIATWMLSGLLMVPYP 190

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>GASR_HUMAN (P32239) Gastrin/cholecystokinin type B receptor (CCK-B receptor)|
           (CCK-BR) (Cholecystokinin-2 receptor) (CCK2-R)
          Length = 447

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 357 SASCRRRGAKVWRTRRSSSVVLAMPWRRKMSMGMPSP 247
           SA CR   A+VW+TR  ++ V+   W     + +P P
Sbjct: 154 SAICRPLQARVWQTRSHAARVIVATWLLSGLLMVPYP 190

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>FOXGB_HUMAN (P55315) Forkhead box protein G1B (Forkhead-related protein FKHL1)|
           (Transcription factor BF-1) (Brain factor 1) (BF1)
           (HFK1)
          Length = 477

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +1

Query: 256 HAHAHLPSPRHRQYHRRASPCPPDLRPSSPAGSRT*TP 369
           H ++H P   H  +H    P PP  +P  P  ++   P
Sbjct: 39  HHNSHHPQHHHHHHHHHHHPPPPAPQPPPPRAAQQQQP 76

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>VGLB_EHV1 (P18050) Glycoprotein B precursor (Glycoprotein 14)|
          Length = 980

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -1

Query: 360 CSASCRRRGAKVWRTRR-SSSVVLAMPWRRKMS 265
           C  S + RGA+ W+T   ++S V  MPWR   S
Sbjct: 259 CRPSLQLRGARAWQTTNDTTSYVGWMPWRHYTS 291

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>FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead factor)|
           (P-Frk)
          Length = 375

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 256 HAHAHLPSPRHRQYHRRASPCPPDLRPSSPA 348
           H HA    P    +H  A+P P  L P+SPA
Sbjct: 297 HLHAAAAPPPAPPHHGAAAPPPGQLSPASPA 327

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>HMX_STRPU (Q26656) Homeobox protein Hmx (SpHmx) (H6-like) (Fragment)|
          Length = 405

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = +1

Query: 274 PSPRHRQYHRRASPCPPDLRPSSPAGSRT*TPTR 375
           PSPRH     R SP  P   P+ P  S    P R
Sbjct: 15  PSPRHETSKMRLSPDRPSHHPARPPASLASQPLR 48

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>FOXL2_HUMAN (P58012) Forkhead box protein L2|
          Length = 376

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 256 HAHAHLPSPRHRQYHRRASPCPPDLRPSSPA 348
           H HA    P    +H  A+P P  L P+SPA
Sbjct: 298 HLHAAAAPPPAPPHHGAAAPPPGQLSPASPA 328

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>GTR14_HUMAN (Q8TDB8) Solute carrier family 2, facilitated glucose transporter|
           member 14 (Glucose transporter type 14)
          Length = 520

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 364 FMFCFLPETRGEGLEDTEKLFGGTGDAVEKEDEHG 260
           F F  +PETRG   ED  + F G     ++  + G
Sbjct: 469 FTFFKVPETRGRTFEDITRAFEGQAHGADRSGKDG 503

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>GASR_MOUSE (P56481) Gastrin/cholecystokinin type B receptor (CCK-B receptor)|
           (CCK-BR) (Cholecystokinin-2 receptor) (CCK2-R)
          Length = 453

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 357 SASCRRRGAKVWRTRRSSSVVLAMPWRRKMSMGMPSP 247
           SA CR   A+VW+TR  ++ V+   W     + +P P
Sbjct: 154 SAICRPLQARVWQTRSHAARVILATWLLSGLLMVPYP 190

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>GTR3_CANFA (P47842) Solute carrier family 2, facilitated glucose transporter|
           member 3 (Glucose transporter type 3, brain)
          Length = 495

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 367 VFMFCFLPETRGEGLEDTEKLFGGTGDAVEKEDE 266
           VF F  +PETRG   E+  + F G G    + ++
Sbjct: 444 VFTFFKVPETRGRTFEEITRAFEGQGQDANRAEK 477

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>GASR_RAT (P30553) Gastrin/cholecystokinin type B receptor (CCK-B receptor)|
           (CCK-BR) (Cholecystokinin-2 receptor) (CCK2-R)
          Length = 452

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 357 SASCRRRGAKVWRTRRSSSVVLAMPWRRKMSMGMPSP 247
           SA CR   A+VW+TR  ++ V+   W     + +P P
Sbjct: 154 SAICRPLQARVWQTRSHAARVILATWLLSGLLMVPYP 190

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>GASR_RABIT (P46627) Gastrin/cholecystokinin type B receptor (CCK-B receptor)|
           (CCK-BR) (Cholecystokinin-2 receptor) (CCK2-R)
          Length = 452

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 357 SASCRRRGAKVWRTRRSSSVVLAMPWRRKMSMGMPSP 247
           SA CR   A+VW+TR  ++ V+   W     + +P P
Sbjct: 152 SAICRPLQARVWQTRSHAARVILATWLLSGLLMVPYP 188

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>GASR_PRANA (P30796) Gastrin/cholecystokinin type B receptor (CCK-B receptor)|
           (CCK-BR) (Cholecystokinin-2 receptor) (CCK2-R)
          Length = 450

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 357 SASCRRRGAKVWRTRRSSSVVLAMPWRRKMSMGMPSP 247
           SA CR   A+VW+TR  ++ V+   W     + +P P
Sbjct: 154 SAICRPLQARVWQTRSHAARVILATWLLSGLLMVPYP 190

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>GTR3_PONPY (Q5R608) Solute carrier family 2, facilitated glucose transporter|
           member 3 (Glucose transporter type 3, brain)
          Length = 496

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 364 FMFCFLPETRGEGLEDTEKLFGGTGDAVEKEDEHG 260
           F F  +PETRG   ED  + F G     ++  + G
Sbjct: 445 FTFFKVPETRGRTFEDITRAFEGQAHGADRSGKDG 479

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>GTR3_HUMAN (P11169) Solute carrier family 2, facilitated glucose transporter|
           member 3 (Glucose transporter type 3, brain)
          Length = 496

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 364 FMFCFLPETRGEGLEDTEKLFGGTGDAVEKEDEHG 260
           F F  +PETRG   ED  + F G     ++  + G
Sbjct: 445 FTFFKVPETRGRTFEDITRAFEGQAHGADRSGKDG 479

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>ASH1_YEAST (P34233) Daughter cells HO repressor protein ASH1|
          Length = 588

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = +1

Query: 265 AHLPSPRHRQYHRRASPCPPDLRPSSPAGSRT*TPTRR 378
           A+ PSPR   YHR A   PP     S   S T   +RR
Sbjct: 448 AYTPSPRSPNYHRFALDSPPQSPRRSSNSSITKKGSRR 485

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>UCRH_RAT (Q5M9I5) Ubiquinol-cytochrome c reductase complex 11 kDa protein,|
           mitochondrial precursor (EC 1.10.2.2) (Mitochondrial
           hinge protein) (Cytochrome C1, nonheme 11 kDa protein)
           (Complex III subunit VIII)
          Length = 89

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -3

Query: 328 GLEDTEKLFGGTGDAVEKEDE 266
           GLED  K+  G+GD  E+E+E
Sbjct: 2   GLEDERKMLTGSGDPKEEEEE 22

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>UCRH_MOUSE (P99028) Ubiquinol-cytochrome c reductase complex 11 kDa protein,|
           mitochondrial precursor (EC 1.10.2.2) (Mitochondrial
           hinge protein) (Cytochrome C1, nonheme 11 kDa protein)
           (Complex III subunit VIII)
          Length = 89

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -3

Query: 328 GLEDTEKLFGGTGDAVEKEDE 266
           GLED  K+  G+GD  E+E+E
Sbjct: 2   GLEDERKMLTGSGDPKEEEEE 22

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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 256 HAHAHLPSPRHRQYHRRASPCPPDLRPSSPAGSRT*TPT 372
           H+H+  PSP  R+  +  SP      PS P   R  +P+
Sbjct: 518 HSHSRSPSPSPRKRQKEPSPRRRRRSPSPPPARRRRSPS 556


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,846,127
Number of Sequences: 219361
Number of extensions: 1221667
Number of successful extensions: 4114
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 3877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4105
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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