| Clone Name | rbaet29h01 |
|---|---|
| Clone Library Name | barley_pub |
>SPT6H_CAEEL (P34703) Suppressor of Ty 6 homolog (Abnormal embryogenesis protein| 5) Length = 1521 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Frame = -3 Query: 286 IAPAIDAEYVEVTHTYIYMN-KCSHIIFMWDIYRERQRERGRSIYVEPVLHGRP 128 + P I + TH Y + N C + RE++RE GRS YV + +P Sbjct: 1384 VQPMIQISHEITTHKYFFPNGTCEETEAVEQFVREKKRELGRSPYVFSASYRQP 1437
>NLT43_HORVU (Q42842) Nonspecific lipid-transfer protein 4.3 precursor (LTP 4.3)| Length = 115 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/14 (92%), Positives = 13/14 (92%) Frame = -1 Query: 348 PYAISASVDCFKIR 307 PYAISASVDC KIR Sbjct: 102 PYAISASVDCSKIR 115
>NLT42_HORVU (Q43875) Nonspecific lipid-transfer protein 4.2 precursor (LTP 4.2)| (Low-temperature-responsive protein 4.9) Length = 115 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/14 (92%), Positives = 13/14 (92%) Frame = -1 Query: 348 PYAISASVDCFKIR 307 PYAISASVDC KIR Sbjct: 102 PYAISASVDCSKIR 115
>NLT41_HORVU (Q43767) Nonspecific lipid-transfer protein 4.1 precursor (LTP 4.1)| (CW21) (CW-21) Length = 115 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/14 (92%), Positives = 13/14 (92%) Frame = -1 Query: 348 PYAISASVDCFKIR 307 PYAISASVDC KIR Sbjct: 102 PYAISASVDCSKIR 115
>ATP7A_CRIGR (P49015) Copper-transporting ATPase 1 (EC 3.6.3.4) (Copper pump 1)| (Fragment) Length = 1476 Score = 28.9 bits (63), Expect = 3.3 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -1 Query: 249 HIHTYI*INALILSSCGIYIERDREREDGVSMLSQFCMAG 130 H YI ++ + +SC IER+ RE+G+ + MAG Sbjct: 477 HSKCYIQVSGMTCASCVANIERNLRREEGIYSVLVALMAG 516
>SYI_YERPS (Q66ES4) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 938 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -3 Query: 199 DIYRERQRERGRSIYVEPVLHGRPYCSIH 113 D+ E RE+G ++VE +LH P C H Sbjct: 381 DVVVELLREKGALLHVEKLLHSYPCCWRH 409
>SYI_YERPE (Q8ZIM0) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 938 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -3 Query: 199 DIYRERQRERGRSIYVEPVLHGRPYCSIH 113 D+ E RE+G ++VE +LH P C H Sbjct: 381 DVVVELLREKGALLHVEKLLHSYPCCWRH 409
>ATP7A_RAT (P70705) Copper-transporting ATPase 1 (EC 3.6.3.4) (Copper pump 1)| (Menkes disease-associated protein homolog) Length = 1492 Score = 27.3 bits (59), Expect = 9.5 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = -1 Query: 237 YI*INALILSSCGIYIERDREREDGVSMLSQFCMAG 130 YI ++ + +SC IER+ RE+G+ + MAG Sbjct: 483 YIQVSGMTCASCVANIERNLRREEGIYSVLVALMAG 518
>KPPR_SPIOL (P09559) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19)| (Phosphopentokinase) (PRKase) (PRK) Length = 402 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = -3 Query: 280 PAIDAEYVEVTHTYIYMNKCSHIIFMWDIYRERQRERGRSI 158 P DA E+ IY++ + + F W I R+ +ERG S+ Sbjct: 180 PMYDARVRELLDFSIYLDISNEVKFAWKIQRD-MKERGHSL 219
>ATP7A_HUMAN (Q04656) Copper-transporting ATPase 1 (EC 3.6.3.4) (Copper pump 1)| (Menkes disease-associated protein) Length = 1500 Score = 27.3 bits (59), Expect = 9.5 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = -1 Query: 237 YI*INALILSSCGIYIERDREREDGVSMLSQFCMAG 130 YI + + +SC IER+ RE+G+ + MAG Sbjct: 491 YIQVTGMTCASCVANIERNLRREEGIYSILVALMAG 526
>GPMI_METMA (Q8PYF8) 2,3-bisphosphoglycerate-independent phosphoglycerate| mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (iPGM) Length = 521 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = +2 Query: 215 MRAFIHIYVCMCDLNVLSVDCWGYRQQVVDQRILKQSTEAL 337 MR +H+ L ++ +D WGYR++ IL ST L Sbjct: 1 MRISLHMTQARRPLMLMILDGWGYREEKEGNAILAASTPHL 41 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,039,783 Number of Sequences: 219361 Number of extensions: 1009630 Number of successful extensions: 2259 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2228 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2258 length of database: 80,573,946 effective HSP length: 91 effective length of database: 60,612,095 effective search space used: 1454690280 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)