>gb|AF411228.1|AF411228 Hordeum vulgare ascorbate peroxidase mRNA, complete cds
          Length = 1138

 Score =  196 bits (99), Expect = 2e-47
 Identities = 102/103 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    gcgtaaaaagcaaaacaatgcaacaccccatcgaccgaccgatctaatccaaatccagac 60
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 gcgtcaaaagcaaaacaatgcaacaccccatcgaccgaccgatctaatccaaatccagac 966

                                                       
Query: 61   aaacacatgacatggccactgggccgacgacagattcttattg 103
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965  aaacacatgacatggccactgggccgacgacagattcttattg 923



 Score = 71.9 bits (36), Expect = 7e-10
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                               
Query: 167 attaccgaccctcaggcgccgatcttgaatcagcag 202
           ||||||||||||||||||||||||||||||||||||
Sbjct: 877 attaccgaccctcaggcgccgatcttgaatcagcag 842

>gb|BT009090.1| Triticum aestivum clone wkm2c.pk0002.f7:fis, full insert mRNA
           sequence
          Length = 973

 Score =  117 bits (59), Expect = 1e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                       
Query: 7   aaagcaaaacaatgcaacaccccatcgaccgaccgatctaatccaaatccagacaaacac 66
           |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 802 aaagcaaaacaatgcaacaccccatcgaccgacccatctaatccaagtccagacaaacac 743

                  
Query: 67  atgacat 73
           |||||||
Sbjct: 742 atgacat 736



 Score = 48.1 bits (24), Expect = 0.010
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 167 attaccgaccctcaggcgccgatcttgaatcagcag 202
           |||| ||||| ||||||||||| |||||||||||||
Sbjct: 694 attaacgaccttcaggcgccgagcttgaatcagcag 659

>emb|AL137857.29| Human DNA sequence from clone RP5-1166H10 on chromosome 1p33-35.1
             Contains the MATN1 gene for matrilin 1 cartilage matrix
             protein, a novel gene (FLJ46197, FLJ33163), the 3' end of
             the gene for Lysosomal-associated multispanning membrane
             protein-5 (LAPTM5) and a CpG island, complete sequence
          Length = 152042

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 8     aagcaaaacaatgcaacacccc 29
             ||||||||||||||||||||||
Sbjct: 34235 aagcaaaacaatgcaacacccc 34256

>emb|AL136293.5|CNS01DVX Human chromosome 14 DNA sequence BAC C-2555C10 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 226035

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 49    ccaaatccagacaaacacatg 69
             |||||||||||||||||||||
Sbjct: 48820 ccaaatccagacaaacacatg 48800

>gb|AC109582.2| Homo sapiens chromosome 3 clone RP11-175B22, complete sequence
          Length = 166821

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     taaaaagcaaaacaatgcaa 23
             ||||||||||||||||||||
Sbjct: 57794 taaaaagcaaaacaatgcaa 57813

>gb|AC099667.2| Homo sapiens chromosome 3 clone RP11-894J14, complete sequence
          Length = 203844

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      taaaaagcaaaacaatgcaa 23
              ||||||||||||||||||||
Sbjct: 156046 taaaaagcaaaacaatgcaa 156027

>gb|AC068787.41| Homo sapiens 12 BAC RP11-483I24 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 173320

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 4    taaaaagcaaaacaatgcaa 23
            ||||||||||||||||||||
Sbjct: 6010 taaaaagcaaaacaatgcaa 6029


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,112,904
Number of Sequences: 3902068
Number of extensions: 1112904
Number of successful extensions: 89245
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89230
Number of HSP's gapped (non-prelim): 15
length of query: 202
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 180
effective length of database: 17,147,199,772
effective search space: 3086495958960
effective search space used: 3086495958960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)