ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet29f12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_506943.1| PREDICTED Oryza sativa (japonica cultivar-group... 115 1e-22
2ref|XM_467513.1| Oryza sativa (japonica cultivar-group), mRNA 115 1e-22
3ref|XM_506944.1| PREDICTED Oryza sativa (japonica cultivar-group... 115 1e-22
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
5dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
6dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
7dbj|AK105989.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 1e-22
8dbj|AK101967.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 1e-22
9ref|NM_192718.1| Oryza sativa (japonica cultivar-group), predic... 84 4e-13
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
11dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
12ref|XM_550548.1| Oryza sativa (japonica cultivar-group), mRNA 56 9e-05
13dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
14dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
15dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
16dbj|AK104685.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 9e-05
17dbj|AK066409.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 9e-05
18dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.088
19dbj|AK058425.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.088
20ref|XM_749710.1| Aspergillus fumigatus Af293 cell wall protein (... 44 0.35
21gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 42 1.4
22gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 1.4
23gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.4
24emb|AL672023.7| Mouse DNA sequence from clone RP23-339O19 on chr... 42 1.4
25ref|NM_185090.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.4
26gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
27ref|XM_370399.1| Magnaporthe grisea 70-15 chromosome II hypothet... 40 5.4
28gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.4
29gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 5.4
30emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 5.4
31gb|AC147407.10| Medicago truncatula clone mth2-159b14, complete ... 40 5.4
32ref|XM_787467.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.4
33emb|AL355305.9| Human DNA sequence from clone RP11-487F23 on chr... 40 5.4
34gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genom... 40 5.4
35dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 5.4
36gb|AE011718.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 5.4
37gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 5.4
38dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
39dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
40dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.4
41gb|AE004807.1| Pseudomonas aeruginosa PAO1, section 368 of 529 o... 40 5.4
42gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genom... 40 5.4
43dbj|AK107563.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
44gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 5.4
45emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 5.4
46emb|CT030168.3| M.truncatula DNA sequence from clone MTH2-16A18 ... 40 5.4 
>ref|XM_506943.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_D06.19
           mRNA
          Length = 1716

 Score =  115 bits (58), Expect = 1e-22
 Identities = 139/166 (83%)
 Strand = Plus / Plus

                                                                       
Query: 220 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 279
           |||||||| || ||||| |  |||| |||||||||||| ||||||||||||||| | |||
Sbjct: 325 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 384

                                                                       
Query: 280 tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 339
           |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | |||||||
Sbjct: 385 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 444

                                                         
Query: 340 tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatgg 385
           |||| | |   |||||||  ||||||||  |||||||| |||||||
Sbjct: 445 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatgg 490



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 70  cttacctcgcaactagaaacaagaagacaaccacatgagagcagccta 117
           ||||||||||||| | ||||||| |||| |||||||||||||| ||||
Sbjct: 162 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 209
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>ref|XM_467513.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1716

 Score =  115 bits (58), Expect = 1e-22
 Identities = 139/166 (83%)
 Strand = Plus / Minus

                                                                        
Query: 220  acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 279
            |||||||| || ||||| |  |||| |||||||||||| ||||||||||||||| | |||
Sbjct: 1392 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 1333

                                                                        
Query: 280  tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 339
            |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | |||||||
Sbjct: 1332 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 1273

                                                          
Query: 340  tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatgg 385
            |||| | |   |||||||  ||||||||  |||||||| |||||||
Sbjct: 1272 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatgg 1227



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 70   cttacctcgcaactagaaacaagaagacaaccacatgagagcagccta 117
            ||||||||||||| | ||||||| |||| |||||||||||||| ||||
Sbjct: 1555 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 1508
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>ref|XM_506944.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_D06.19 mRNA
          Length = 1737

 Score =  115 bits (58), Expect = 1e-22
 Identities = 139/166 (83%)
 Strand = Plus / Minus

                                                                        
Query: 220  acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 279
            |||||||| || ||||| |  |||| |||||||||||| ||||||||||||||| | |||
Sbjct: 1398 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 1339

                                                                        
Query: 280  tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 339
            |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | |||||||
Sbjct: 1338 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 1279

                                                          
Query: 340  tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatgg 385
            |||| | |   |||||||  ||||||||  |||||||| |||||||
Sbjct: 1278 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatgg 1233



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 70   cttacctcgcaactagaaacaagaagacaaccacatgagagcagccta 117
            ||||||||||||| | ||||||| |||| |||||||||||||| ||||
Sbjct: 1561 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 1514
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  115 bits (58), Expect = 1e-22
 Identities = 139/166 (83%)
 Strand = Plus / Plus

                                                                            
Query: 220      acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 279
                |||||||| || ||||| |  |||| |||||||||||| ||||||||||||||| | |||
Sbjct: 29911320 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 29911379

                                                                            
Query: 280      tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 339
                |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | |||||||
Sbjct: 29911380 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 29911439

                                                              
Query: 340      tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatgg 385
                |||| | |   |||||||  ||||||||  |||||||| |||||||
Sbjct: 29911440 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatgg 29911485



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                                
Query: 70       cttacctcgcaactagaaacaagaagacaaccacatgagagcagccta 117
                ||||||||||||| | ||||||| |||| |||||||||||||| ||||
Sbjct: 29911157 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 29911204
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>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0654B04
          Length = 156907

 Score =  115 bits (58), Expect = 1e-22
 Identities = 139/166 (83%)
 Strand = Plus / Plus

                                                                         
Query: 220   acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 279
             |||||||| || ||||| |  |||| |||||||||||| ||||||||||||||| | |||
Sbjct: 11596 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 11655

                                                                         
Query: 280   tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 339
             |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | |||||||
Sbjct: 11656 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 11715

                                                           
Query: 340   tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatgg 385
             |||| | |   |||||||  ||||||||  |||||||| |||||||
Sbjct: 11716 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatgg 11761



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 70    cttacctcgcaactagaaacaagaagacaaccacatgagagcagccta 117
             ||||||||||||| | ||||||| |||| |||||||||||||| ||||
Sbjct: 11433 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 11480
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>dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_D06
          Length = 112768

 Score =  115 bits (58), Expect = 1e-22
 Identities = 139/166 (83%)
 Strand = Plus / Plus

                                                                         
Query: 220   acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 279
             |||||||| || ||||| |  |||| |||||||||||| ||||||||||||||| | |||
Sbjct: 68285 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 68344

                                                                         
Query: 280   tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 339
             |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | |||||||
Sbjct: 68345 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 68404

                                                           
Query: 340   tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatgg 385
             |||| | |   |||||||  ||||||||  |||||||| |||||||
Sbjct: 68405 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatgg 68450



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 70    cttacctcgcaactagaaacaagaagacaaccacatgagagcagccta 117
             ||||||||||||| | ||||||| |||| |||||||||||||| ||||
Sbjct: 68122 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 68169
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>dbj|AK105989.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G11, full
            insert sequence
          Length = 1716

 Score =  115 bits (58), Expect = 1e-22
 Identities = 139/166 (83%)
 Strand = Plus / Minus

                                                                        
Query: 220  acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 279
            |||||||| || ||||| |  |||| |||||||||||| ||||||||||||||| | |||
Sbjct: 1392 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 1333

                                                                        
Query: 280  tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 339
            |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | |||||||
Sbjct: 1332 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 1273

                                                          
Query: 340  tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatgg 385
            |||| | |   |||||||  ||||||||  |||||||| |||||||
Sbjct: 1272 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatgg 1227



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 70   cttacctcgcaactagaaacaagaagacaaccacatgagagcagccta 117
            ||||||||||||| | ||||||| |||| |||||||||||||| ||||
Sbjct: 1555 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 1508
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>dbj|AK101967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076I21, full
            insert sequence
          Length = 1736

 Score =  115 bits (58), Expect = 1e-22
 Identities = 139/166 (83%)
 Strand = Plus / Minus

                                                                        
Query: 220  acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 279
            |||||||| || ||||| |  |||| |||||||||||| ||||||||||||||| | |||
Sbjct: 1397 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 1338

                                                                        
Query: 280  tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 339
            |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | |||||||
Sbjct: 1337 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 1278

                                                          
Query: 340  tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatgg 385
            |||| | |   |||||||  ||||||||  |||||||| |||||||
Sbjct: 1277 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatgg 1232



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 70   cttacctcgcaactagaaacaagaagacaaccacatgagagcagccta 117
            ||||||||||||| | ||||||| |||| |||||||||||||| ||||
Sbjct: 1560 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 1513
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>ref|NM_192718.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1413

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 132/162 (81%)
 Strand = Plus / Minus

                                                                        
Query: 246  ctgctgcacgttgccgatgatgccggtgcttccgtcgtcgccggtgtccgtgaacgcgag 305
            ||||||||||||||||||| |||||  |     |||||||| ||||  || |||||||||
Sbjct: 1347 ctgctgcacgttgccgatggtgccgaaggccttgtcgtcgcgggtgggcgcgaacgcgag 1288

                                                                        
Query: 306  gcagctgccgaatatgatcccgttggcgtcgaggtcgacgaccttgccgccgtcgaacac 365
            ||||| |||| | | ||| ||||  |||||||||||||||||   ||||||| |||||||
Sbjct: 1287 gcagccgccggacacgatgccgtgcgcgtcgaggtcgacgacggcgccgccggcgaacac 1228

                                                      
Query: 366  caaagcgacggtgggtatggtgacgttgtcctggccgctgaa 407
            ||  |||||||| |||||| |||| |||||| ||||| ||||
Sbjct: 1227 cagcgcgacggtcggtatgctgaccttgtccaggccggtgaa 1186
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 132/162 (81%)
 Strand = Plus / Minus

                                                                            
Query: 246      ctgctgcacgttgccgatgatgccggtgcttccgtcgtcgccggtgtccgtgaacgcgag 305
                ||||||||||||||||||| |||||  |     |||||||| ||||  || |||||||||
Sbjct: 24015986 ctgctgcacgttgccgatggtgccgaaggccttgtcgtcgcgggtgggcgcgaacgcgag 24015927

                                                                            
Query: 306      gcagctgccgaatatgatcccgttggcgtcgaggtcgacgaccttgccgccgtcgaacac 365
                ||||| |||| | | ||| ||||  |||||||||||||||||   ||||||| |||||||
Sbjct: 24015926 gcagccgccggacacgatgccgtgcgcgtcgaggtcgacgacggcgccgccggcgaacac 24015867

                                                          
Query: 366      caaagcgacggtgggtatggtgacgttgtcctggccgctgaa 407
                ||  |||||||| |||||| |||| |||||| ||||| ||||
Sbjct: 24015866 cagcgcgacggtcggtatgctgaccttgtccaggccggtgaa 24015825
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>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0090K04
          Length = 152556

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 132/162 (81%)
 Strand = Plus / Minus

                                                                          
Query: 246    ctgctgcacgttgccgatgatgccggtgcttccgtcgtcgccggtgtccgtgaacgcgag 305
              ||||||||||||||||||| |||||  |     |||||||| ||||  || |||||||||
Sbjct: 130508 ctgctgcacgttgccgatggtgccgaaggccttgtcgtcgcgggtgggcgcgaacgcgag 130449

                                                                          
Query: 306    gcagctgccgaatatgatcccgttggcgtcgaggtcgacgaccttgccgccgtcgaacac 365
              ||||| |||| | | ||| ||||  |||||||||||||||||   ||||||| |||||||
Sbjct: 130448 gcagccgccggacacgatgccgtgcgcgtcgaggtcgacgacggcgccgccggcgaacac 130389

                                                        
Query: 366    caaagcgacggtgggtatggtgacgttgtcctggccgctgaa 407
              ||  |||||||| |||||| |||| |||||| ||||| ||||
Sbjct: 130388 cagcgcgacggtcggtatgctgaccttgtccaggccggtgaa 130347
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>ref|XM_550548.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1886

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 220  acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccgg 271
            |||||||| | |||||| || ||| ||||||||||||||||||||| |||||
Sbjct: 1519 acgtcgtacaccacctccagcgtcttctgctgcacgttgccgatgaagccgg 1468
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                   
Query: 220     acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccgg 271
               |||||||| | |||||| || ||| ||||||||||||||||||||| |||||
Sbjct: 1062931 acgtcgtacaccacctccagcgtcttctgctgcacgttgccgatgaagccgg 1062982



 Score = 46.1 bits (23), Expect = 0.088
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                  
Query: 220     acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccg 270
               |||||||||||||||||  | |||  |||||||||||| ||||||| ||||
Sbjct: 1154089 acgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccg 1154039



 Score = 46.1 bits (23), Expect = 0.088
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                  
Query: 220     acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccg 270
               |||||||||||||||||  | |||  |||||||||||| ||||||| ||||
Sbjct: 1137543 acgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccg 1137493
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>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0660D08
          Length = 146915

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 220   acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccgg 271
             |||||||| | |||||| || ||| ||||||||||||||||||||| |||||
Sbjct: 39154 acgtcgtacaccacctccagcgtcttctgctgcacgttgccgatgaagccgg 39205



 Score = 46.1 bits (23), Expect = 0.088
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                 
Query: 220    acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccg 270
              |||||||||||||||||  | |||  |||||||||||| ||||||| ||||
Sbjct: 130312 acgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccg 130262



 Score = 46.1 bits (23), Expect = 0.088
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                 
Query: 220    acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccg 270
              |||||||||||||||||  | |||  |||||||||||| ||||||| ||||
Sbjct: 113766 acgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccg 113716
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>dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0062J13
          Length = 152837

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                  
Query: 220    acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccgg 271
              |||||||| | |||||| || ||| ||||||||||||||||||||| |||||
Sbjct: 125804 acgtcgtacaccacctccagcgtcttctgctgcacgttgccgatgaagccgg 125855
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>dbj|AK104685.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C01, full
            insert sequence
          Length = 1886

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 220  acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccgg 271
            |||||||| | |||||| || ||| ||||||||||||||||||||| |||||
Sbjct: 1519 acgtcgtacaccacctccagcgtcttctgctgcacgttgccgatgaagccgg 1468
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>dbj|AK066409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067G18, full
            insert sequence
          Length = 1900

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 220  acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccgg 271
            |||||||| | |||||| || ||| ||||||||||||||||||||| |||||
Sbjct: 1511 acgtcgtacaccacctccagcgtcttctgctgcacgttgccgatgaagccgg 1460
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>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0542E10
          Length = 146196

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 220  acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccg 270
            |||||||||||||||||  | |||  |||||||||||| ||||||| ||||
Sbjct: 6042 acgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccg 5992
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>dbj|AK058425.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-E01, full
            insert sequence
          Length = 1389

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 220  acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccg 270
            |||||||||||||||||  | |||  |||||||||||| ||||||| ||||
Sbjct: 1302 acgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccg 1252
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>ref|XM_749710.1| Aspergillus fumigatus Af293 cell wall protein (Afu3g08110) partial
           mRNA
          Length = 1848

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 266 tgccggtgcttccgtcgtcgcc 287
           ||||||||||||||||||||||
Sbjct: 813 tgccggtgcttccgtcgtcgcc 834
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>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 331    gcgtcgaggtcgacgaccttgccgc 355
              ||||||||||||||||||| |||||
Sbjct: 473436 gcgtcgaggtcgacgacctcgccgc 473460
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 338     ggtcgacgaccttgccgccgt 358
               |||||||||||||||||||||
Sbjct: 1854323 ggtcgacgaccttgccgccgt 1854303
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 324     cccgttggcgtcgaggtcgacgacc 348
               |||||||||||||| ||||||||||
Sbjct: 4424790 cccgttggcgtcgatgtcgacgacc 4424814
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>emb|AL672023.7| Mouse DNA sequence from clone RP23-339O19 on chromosome X, complete
             sequence
          Length = 160615

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 109   agcagcctagctagccaccct 129
             |||||||||||||||||||||
Sbjct: 84463 agcagcctagctagccaccct 84443
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>ref|NM_185090.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 691

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ttggcgtcgaggtcgacgac 347
           ||||||||||||||||||||
Sbjct: 359 ttggcgtcgaggtcgacgac 340
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>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12,
              complete sequence
          Length = 157069

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     tatattatggaactgaggaa 40
              ||||||||||||||||||||
Sbjct: 112119 tatattatggaactgaggaa 112138
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>ref|XM_370399.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein
            (MG06896.4) partial mRNA
          Length = 4419

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 247  tgctgcacgttgccgatgat 266
            ||||||||||||||||||||
Sbjct: 1637 tgctgcacgttgccgatgat 1618
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 328      ttggcgtcgaggtcgacgac 347
                ||||||||||||||||||||
Sbjct: 34587795 ttggcgtcgaggtcgacgac 34587814
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 254     cgttgccgatgatgccggtg 273
               ||||||||||||||||||||
Sbjct: 1714102 cgttgccgatgatgccggtg 1714083
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 344     cgaccttgccgccgtcgaacacca 367
               |||||||||||||||||| |||||
Sbjct: 2144233 cgaccttgccgccgtcgaccacca 2144256



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 267     gccggtgcttccgtcgtcgccggt 290
               ||||||||| ||||||||||||||
Sbjct: 1035581 gccggtgctgccgtcgtcgccggt 1035604
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>gb|AC147407.10| Medicago truncatula clone mth2-159b14, complete sequence
          Length = 115857

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   agcctagctagccacccttc 131
             ||||||||||||||||||||
Sbjct: 85366 agcctagctagccacccttc 85347
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>ref|XM_787467.1| PREDICTED: Strongylocentrotus purpuratus similar to telomeric repeat
            binding factor a (LOC587756), mRNA
          Length = 1482

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 47   tgattttggcccacttggtg 66
            ||||||||||||||||||||
Sbjct: 1063 tgattttggcccacttggtg 1044
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>emb|AL355305.9| Human DNA sequence from clone RP11-487F23 on chromosome 6 Contains the 5'
              end of the gene for p53 regulated PA26 nuclear protein
              (PA26-T1), a novel gene and part of a novel gene, complete
              sequence
          Length = 185257

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 52     ttggcccacttggtgtcccttacc 75
              ||||||||||||||| ||||||||
Sbjct: 177619 ttggcccacttggtggcccttacc 177596
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>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete
             sequence
          Length = 164236

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 328   ttggcgtcgaggtcgacgac 347
             ||||||||||||||||||||
Sbjct: 45512 ttggcgtcgaggtcgacgac 45531
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 267     gccggtgcttccgtcgtcgccggt 290
               ||||||||| ||||||||||||||
Sbjct: 3994431 gccggtgctgccgtcgtcgccggt 3994408
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>gb|AE011718.1| Xanthomonas axonopodis pv. citri str. 306,  section 96 of 469 of the
             complete genome
          Length = 12328

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 267   gccggtgcttccgtcgtcgccggt 290
             ||||||||| ||||||||||||||
Sbjct: 11490 gccggtgctgccgtcgtcgccggt 11513
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 254    cgttgccgatgatgccggtg 273
              ||||||||||||||||||||
Sbjct: 741089 cgttgccgatgatgccggtg 741108
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 21       tatattatggaactgaggaa 40
                ||||||||||||||||||||
Sbjct: 19511407 tatattatggaactgaggaa 19511426
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 328      ttggcgtcgaggtcgacgac 347
                ||||||||||||||||||||
Sbjct: 34677867 ttggcgtcgaggtcgacgac 34677886
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 319     atgatcccgttggcgtcgag 338
               ||||||||||||||||||||
Sbjct: 8108308 atgatcccgttggcgtcgag 8108289
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>gb|AE004807.1| Pseudomonas aeruginosa PAO1, section 368 of 529 of the complete
            genome
          Length = 10698

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 340  tcgacgaccttgccgccgtcgaacacca 367
            |||||| ||||||||||||||| |||||
Sbjct: 9245 tcgacgcccttgccgccgtcgagcacca 9218
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>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete
             sequence
          Length = 129302

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 328   ttggcgtcgaggtcgacgac 347
             ||||||||||||||||||||
Sbjct: 55538 ttggcgtcgaggtcgacgac 55519
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>dbj|AK107563.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-C02, full
           insert sequence
          Length = 827

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ttggcgtcgaggtcgacgac 347
           ||||||||||||||||||||
Sbjct: 369 ttggcgtcgaggtcgacgac 350
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 267     gccggtgcttccgtcgtcgccggt 290
               ||||||||| ||||||||||||||
Sbjct: 3996724 gccggtgctgccgtcgtcgccggt 3996701
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 254     cgttgccgatgatgccggtg 273
               ||||||||||||||||||||
Sbjct: 2118804 cgttgccgatgatgccggtg 2118823
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>emb|CT030168.3| M.truncatula DNA sequence from clone MTH2-16A18 on chromosome 3, complete
              sequence
          Length = 125291

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    agcctagctagccacccttc 131
              ||||||||||||||||||||
Sbjct: 109803 agcctagctagccacccttc 109822


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,712,291
Number of Sequences: 3902068
Number of extensions: 2712291
Number of successful extensions: 49542
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48758
Number of HSP's gapped (non-prelim): 784
length of query: 407
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 385
effective length of database: 17,147,199,772
effective search space: 6601671912220
effective search space used: 6601671912220
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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