| Clone Name | rbaet29f07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AM039896.1| Hordeum vulgare mRNA for putative AdoMet synthase 4 (sam4 gene) Length = 1546 Score = 664 bits (335), Expect = 0.0 Identities = 360/370 (97%), Gaps = 1/370 (0%) Strand = Plus / Minus Query: 6 ggaacgaaaagaaatcgcatacatgctgaacagagttgttccaatacagatgattaccaa 65 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1546 ggaacgaaaagaaatcgcatacatgctgaacagagttgttccaatacagatgattaccaa 1487 Query: 66 agagtggagagctatatttcttggatagtttcaatcttgtcgtcaccattaccatgactt 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1486 agagtggagagctatatttcttggatagtttcaatcttgtcgtcaccattaccatgactt 1427 Query: 126 gagcagataagaacacaagtagcacacccacgatacatgcacctctaaacacactgnnnn 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1426 gagcagataagaacacaagtagcacacccacgatacatgcacctctaaacacactgaaaa 1367 Query: 186 nnnnngacttgcaccgttgcagcactggagcaatgaatagagatattacttgctgcgaca 245 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1366 aaaaagacttgcaccgttgcagcactggagcaatgaatagagatattacttgctgcgaca 1307 Query: 246 ggtaaaactaattttattcagaggcttcgctaagtgtttgctcaggcagaaggcttctcc 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1306 ggtaaaactaattttattcagaggcttcgctaagtgtttgctcaggcagaaggcttctcc 1247 Query: 306 cacttgaggggcttcacaacctcccagggtgaagtccgcgccatccctgccgaagtgccc 365 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1246 cacttgaggggcttcacaacctccca-ggtgaagtccgcgccatccctgccgaagtgccc 1188 Query: 366 gtatgccgcc 375 |||||||||| Sbjct: 1187 gtatgccgcc 1178
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 93.7 bits (47), Expect = 4e-16 Identities = 78/87 (89%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 289 aggcagaaggcttctcccacttgaggggcttcacaacctcccagggtgaagtccgcgcca 348 |||||||||||||||||||||||||||||||||| |||||||| ||||||||| | | | Sbjct: 124145 aggcagaaggcttctcccacttgaggggcttcaccacctccca-ggtgaagtctgggtcg 124087 Query: 349 tccctgccgaagtgcccgtatgccgcc 375 ||||| |||||||| ||||| |||||| Sbjct: 124086 tcccttccgaagtgaccgtaagccgcc 124060
>emb|Z26867.1|OSSAMS1 O.sativa (pRSAM-1) gene for S-adenosyl methionine synthetase Length = 2183 Score = 93.7 bits (47), Expect = 4e-16 Identities = 78/87 (89%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 289 aggcagaaggcttctcccacttgaggggcttcacaacctcccagggtgaagtccgcgcca 348 |||||||||||||||||||||||||||||||||| |||||||| ||||||||| | | | Sbjct: 1976 aggcagaaggcttctcccacttgaggggcttcaccacctccca-ggtgaagtctgggtcg 1918 Query: 349 tccctgccgaagtgcccgtatgccgcc 375 ||||| |||||||| ||||| |||||| Sbjct: 1917 tcccttccgaagtgaccgtaagccgcc 1891
>emb|AJ296743.1|OSA296743 Oryza sativa mRNA for S-adenosylmethionine synthetase (SAMS gene) Length = 1594 Score = 93.7 bits (47), Expect = 4e-16 Identities = 78/87 (89%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 289 aggcagaaggcttctcccacttgaggggcttcacaacctcccagggtgaagtccgcgcca 348 |||||||||||||||||||||||||||||||||| |||||||| ||||||||| | | | Sbjct: 1296 aggcagaaggcttctcccacttgaggggcttcaccacctccca-ggtgaagtctgggtcg 1238 Query: 349 tccctgccgaagtgcccgtatgccgcc 375 ||||| |||||||| ||||| |||||| Sbjct: 1237 tcccttccgaagtgaccgtaagccgcc 1211
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 93.7 bits (47), Expect = 4e-16 Identities = 78/87 (89%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 289 aggcagaaggcttctcccacttgaggggcttcacaacctcccagggtgaagtccgcgcca 348 |||||||||||||||||||||||||||||||||| |||||||| ||||||||| | | | Sbjct: 2031268 aggcagaaggcttctcccacttgaggggcttcaccacctccca-ggtgaagtctgggtcg 2031210 Query: 349 tccctgccgaagtgcccgtatgccgcc 375 ||||| |||||||| ||||| |||||| Sbjct: 2031209 tcccttccgaagtgaccgtaagccgcc 2031183
>dbj|AK104875.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D12, full insert sequence Length = 1487 Score = 93.7 bits (47), Expect = 4e-16 Identities = 78/87 (89%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 289 aggcagaaggcttctcccacttgaggggcttcacaacctcccagggtgaagtccgcgcca 348 |||||||||||||||||||||||||||||||||| |||||||| ||||||||| | | | Sbjct: 1204 aggcagaaggcttctcccacttgaggggcttcaccacctccca-ggtgaagtctgggtcg 1146 Query: 349 tccctgccgaagtgcccgtatgccgcc 375 ||||| |||||||| ||||| |||||| Sbjct: 1145 tcccttccgaagtgaccgtaagccgcc 1119
>dbj|AK103157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121A17, full insert sequence Length = 1586 Score = 93.7 bits (47), Expect = 4e-16 Identities = 78/87 (89%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 289 aggcagaaggcttctcccacttgaggggcttcacaacctcccagggtgaagtccgcgcca 348 |||||||||||||||||||||||||||||||||| |||||||| ||||||||| | | | Sbjct: 1307 aggcagaaggcttctcccacttgaggggcttcaccacctccca-ggtgaagtctgggtcg 1249 Query: 349 tccctgccgaagtgcccgtatgccgcc 375 ||||| |||||||| ||||| |||||| Sbjct: 1248 tcccttccgaagtgaccgtaagccgcc 1222
>dbj|AK072051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111H09, full insert sequence Length = 1555 Score = 89.7 bits (45), Expect = 6e-15 Identities = 76/85 (89%), Gaps = 1/85 (1%) Strand = Plus / Minus Query: 291 gcagaaggcttctcccacttgaggggcttcacaacctcccagggtgaagtccgcgccatc 350 |||||||||||||||||||||||||||||||| |||||||| ||||||||| | | | || Sbjct: 1305 gcagaaggcttctcccacttgaggggcttcaccacctccca-ggtgaagtctgggtcgtc 1247 Query: 351 cctgccgaagtgcccgtatgccgcc 375 ||| |||||||| ||||| |||||| Sbjct: 1246 ccttccgaagtgaccgtaagccgcc 1222
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 85.7 bits (43), Expect = 9e-14 Identities = 86/99 (86%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 277 aagtgtttgctcaggcagaaggcttctcccacttgaggggcttcacaacctcccagggtg 336 ||||||||| | | |||||||||| ||||||||||||||| ||||| |||||||| |||| Sbjct: 10655857 aagtgtttgtttatgcagaaggctcctcccacttgaggggtttcaccacctccca-ggtg 10655915 Query: 337 aagtccgcgccatccctgccgaagtgcccgtatgccgcc 375 ||||| | | | ||||| |||||||||||||| |||||| Sbjct: 10655916 aagtcagggtcctccctcccgaagtgcccgtaagccgcc 10655954
>dbj|AP002482.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0706B05 Length = 187835 Score = 85.7 bits (43), Expect = 9e-14 Identities = 86/99 (86%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 277 aagtgtttgctcaggcagaaggcttctcccacttgaggggcttcacaacctcccagggtg 336 ||||||||| | | |||||||||| ||||||||||||||| ||||| |||||||| |||| Sbjct: 150480 aagtgtttgtttatgcagaaggctcctcccacttgaggggtttcaccacctccca-ggtg 150538 Query: 337 aagtccgcgccatccctgccgaagtgcccgtatgccgcc 375 ||||| | | | ||||| |||||||||||||| |||||| Sbjct: 150539 aagtcagggtcctccctcccgaagtgcccgtaagccgcc 150577
>ref|NM_183624.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1191 Score = 81.8 bits (41), Expect = 1e-12 Identities = 75/85 (88%), Gaps = 1/85 (1%) Strand = Plus / Minus Query: 291 gcagaaggcttctcccacttgaggggcttcacaacctcccagggtgaagtccgcgccatc 350 |||||||||| ||||||||||||||| ||||| |||||||| ||||||||| | | | || Sbjct: 1187 gcagaaggctcctcccacttgaggggtttcaccacctccca-ggtgaagtcagggtcctc 1129 Query: 351 cctgccgaagtgcccgtatgccgcc 375 ||| |||||||||||||| |||||| Sbjct: 1128 cctcccgaagtgcccgtaagccgcc 1104
>dbj|AB221009.1| Beta vulgaris BvSAMS1 mRNA for S-adenosyl-L-methionine synthetase, complete cds Length = 1720 Score = 79.8 bits (40), Expect = 6e-12 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 297 ggcttctcccacttgaggggcttcacaacctcccagggtgaagtccgcgccatccctgcc 356 ||||| ||||||||||||||||||||||||||||| |||||||| | | ||||||| || Sbjct: 1309 ggcttgtcccacttgaggggcttcacaacctccca-tgtgaagtctgggtcatccctacc 1251 Query: 357 gaagtgcccgta 368 |||||||||||| Sbjct: 1250 gaagtgcccgta 1239
>gb|AY039010.1| Elaeis oleifera S-adenosyl methionine synthetase (SAMS1) mRNA, partial cds Length = 545 Score = 73.8 bits (37), Expect = 4e-10 Identities = 62/69 (89%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 300 ttctcccacttgaggggcttcacaacctcccagggtgaagtccgcgccatccctgccgaa 359 ||||||| ||||||||||||||| |||||||| ||||||||| | | ||||||||||||| Sbjct: 232 ttctcccccttgaggggcttcaccacctccca-ggtgaagtcggtgtcatccctgccgaa 174 Query: 360 gtgcccgta 368 |||||||| Sbjct: 173 atgcccgta 165
>gb|AF346305.1|AF346305 Elaeagnus umbellata S-adenosyl-L-methionine synthetase (SAMS1) mRNA, complete cds Length = 1572 Score = 63.9 bits (32), Expect = 3e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 296 aggcttctcccacttgaggggcttcacaacctccca 331 ||||||||||||||||||||||||||||| |||||| Sbjct: 1255 aggcttctcccacttgaggggcttcacaatctccca 1220
>dbj|AB183564.1| Atriplex nummularia AnSAMS4 mRNA for S-adenosyl-L-methionine synthase 4, complete cds Length = 1674 Score = 63.9 bits (32), Expect = 3e-07 Identities = 63/72 (87%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 297 ggcttctcccacttgaggggcttcacaacctcccagggtgaagtccgcgccatccctgcc 356 ||||||||||||||||||||||||||| |||||| |||||||| ||| | ||||| || Sbjct: 1303 ggcttctcccacttgaggggcttcacagtctccca-tgtgaagtctgcgtcgtccctacc 1245 Query: 357 gaagtgcccgta 368 |||||| ||||| Sbjct: 1244 gaagtgaccgta 1233
>dbj|AB183562.1| Atriplex nummularia AnSAMS2 mRNA for S-adenosyl-L-methionine synthase 2, complete cds Length = 1683 Score = 63.9 bits (32), Expect = 3e-07 Identities = 63/72 (87%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 297 ggcttctcccacttgaggggcttcacaacctcccagggtgaagtccgcgccatccctgcc 356 ||||||||||||||||||||||||||| |||||| |||||||| ||| | ||||| || Sbjct: 1301 ggcttctcccacttgaggggcttcacagtctccca-tgtgaagtctgcgtcgtccctacc 1243 Query: 357 gaagtgcccgta 368 |||||| ||||| Sbjct: 1242 gaagtgaccgta 1231
>dbj|AP004964.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT20J05, TM0143a, complete sequence Length = 7894 Score = 63.9 bits (32), Expect = 3e-07 Identities = 66/76 (86%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 296 aggcttctcccacttgaggggcttcacaacctcccagggtgaagtccgcgccatccctgc 355 |||||||||||||||||| ||||||||||| ||||| ||||||||| | | ||||||| | Sbjct: 1458 aggcttctcccacttgagtggcttcacaacttccca-ggtgaagtctgggtcatcccttc 1400 Query: 356 cgaagtgcccgtatgc 371 | ||||| || ||||| Sbjct: 1399 caaagtgtccatatgc 1384
>gb|BT016479.1| Zea mays clone Contig312 mRNA sequence Length = 1352 Score = 61.9 bits (31), Expect = 1e-06 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 297 ggcttctcccacttgaggggcttcacaacctcccagggtgaagtccgcgccatccctgcc 356 ||||||||| ||||||||||||||| |||||||| ||||||||| | | | ||||| || Sbjct: 1012 ggcttctccgccttgaggggcttcaccacctccca-ggtgaagtcggggtcgtccctccc 954 Query: 357 gaagtgcccgtatgccgcc 375 ||||||||||| |||||| Sbjct: 953 aaagtgcccgtaggccgcc 935
>gb|U79767.1|MCU79767 Mesembryanthemum crystallinum methionine adenosyltransferase mRNA, complete cds Length = 1628 Score = 60.0 bits (30), Expect = 5e-06 Identities = 58/66 (87%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 297 ggcttctcccacttgaggggcttcacaacctcccagggtgaagtccgcgccatccctgcc 356 ||||||||||| |||||||||||||| |||||||| |||||||| ||| | ||||| || Sbjct: 1237 ggcttctcccatttgaggggcttcaccacctccca-tgtgaagtctgcgtcgtccctacc 1179 Query: 357 gaagtg 362 |||||| Sbjct: 1178 gaagtg 1173
>gb|AF346306.1|AF346306 Elaeagnus umbellata S-adenosyl-L-methionine synthetase (SAMS2) mRNA, complete cds Length = 1627 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 296 aggcttctcccacttgaggggcttcacaacctccca 331 |||||||||||| |||||||||||||||| |||||| Sbjct: 1282 aggcttctcccatttgaggggcttcacaatctccca 1247
>dbj|AB221010.1| Beta vulgaris BvSAMS2 mRNA for S-adenosyl-L-methionine synthetase, complete cds Length = 1570 Score = 56.0 bits (28), Expect = 8e-05 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 300 ttctcccacttgaggggcttcacaacctcccagggtgaagtccgcgccatccctgccgaa 359 ||||||||||| |||||||| || |||||||| ||||||||| | | |||| || || || Sbjct: 1231 ttctcccacttcaggggcttgacgacctccca-ggtgaagtctgggtcatctcttccaaa 1173 Query: 360 gtgcccgtatgc 371 |||||||||||| Sbjct: 1172 gtgcccgtatgc 1161
>dbj|AB183565.1| Atriplex nummularia AnSAMS5 mRNA for S-adenosyl-L-methionine synthase 5, complete cds Length = 1684 Score = 56.0 bits (28), Expect = 8e-05 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 297 ggcttctcccacttgaggggcttcacaacctcccagggtgaagtccgcgccatccctgcc 356 ||||||||||||||||||||||| ||| |||||| |||||||| ||| | ||||| || Sbjct: 1303 ggcttctcccacttgaggggcttgacagtctccca-tgtgaagtctgcgtcgtccctacc 1245 Query: 357 gaagtgcccgta 368 |||||| ||||| Sbjct: 1244 gaagtgaccgta 1233
>dbj|AB183563.1| Atriplex nummularia AnSAMS3 mRNA for S-adenosyl-L-methionine synthase 3, complete cds Length = 1678 Score = 56.0 bits (28), Expect = 8e-05 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 297 ggcttctcccacttgaggggcttcacaacctcccagggtgaagtccgcgccatccctgcc 356 ||||||||||||||||||||||| ||| |||||| |||||||| ||| | ||||| || Sbjct: 1303 ggcttctcccacttgaggggcttgacagtctccca-tgtgaagtctgcgtcgtccctacc 1245 Query: 357 gaagtgcccgta 368 |||||| ||||| Sbjct: 1244 gaagtgaccgta 1233
>gb|AF420238.1|AF420238 Dendrobium crumenatum S-adenosyl-L-methionine synthetase (Sams) mRNA, complete cds Length = 1566 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 303 tcccacttgaggggcttcacaacctcccagg 333 |||||||||||||||||||| |||||||||| Sbjct: 1245 tcccacttgaggggcttcaccacctcccagg 1215
>gb|AY583461.1| Daucus carota S-adenosyl-L-methionine synthetase 1 (SAMS1) mRNA, complete cds Length = 1497 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 297 ggcttctcccacttgaggggcttcacaacctccca 331 ||||| |||||||||||||||||||| |||||||| Sbjct: 1332 ggcttttcccacttgaggggcttcaccacctccca 1298
>emb|AM039895.1| Hordeum vulgare mRNA for putative AdoMet synthase 3 (sam3 gene) Length = 1447 Score = 52.0 bits (26), Expect = 0.001 Identities = 54/62 (87%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 307 acttgaggggcttcacaacctcccagggtgaagtccgcgccatccctgccgaagtgcccg 366 |||||||||||||||| |||||||| ||||||||| || |||| | ||||||||| ||| Sbjct: 1248 acttgaggggcttcaccacctccca-ggtgaagtcagcatcatcgcggccgaagtgaccg 1190 Query: 367 ta 368 || Sbjct: 1189 ta 1188
>gb|M73430.1|POPSAMPDPT Populus x generosa tissue-type leaf S-adenosyl methionine synthetase mRNA, complete cds Length = 1437 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 303 tcccacttgaggggcttcacaacctccca 331 |||||||||||||||||||| |||||||| Sbjct: 1228 tcccacttgaggggcttcaccacctccca 1200
>gb|AY583462.1| Daucus carota S-adenosyl-L-methionine synthetase 2 (SAMS2) mRNA, complete cds Length = 1207 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Minus Query: 297 ggcttctcccacttgaggggcttcacaacctcccagg 333 ||||| ||||||||||||||||| || |||||||||| Sbjct: 1177 ggcttttcccacttgaggggcttgactacctcccagg 1141
>gb|AC144563.15| Medicago truncatula clone mth2-5c24, complete sequence Length = 111376 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Plus Query: 296 aggcttctcccacttgaggggcttcacaacctccca 331 |||||||||||||||||| || |||||||| ||||| Sbjct: 94504 aggcttctcccacttgagtggtttcacaacttccca 94539
>dbj|AB183561.1| Atriplex nummularia AnSAMS1 mRNA for S-adenosyl-L-methionine synthase 1, complete cds Length = 1668 Score = 48.1 bits (24), Expect = 0.020 Identities = 61/72 (84%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 297 ggcttctcccacttgaggggcttcacaacctcccagggtgaagtccgcgccatccctgcc 356 ||||||||||||||||||||||| ||| |||||| |||||||| ||| | ||||| || Sbjct: 1302 ggcttctcccacttgaggggcttgacagtctccca-tgtgaagtctgcgtcgtccctacc 1244 Query: 357 gaagtgcccgta 368 ||| || ||||| Sbjct: 1243 gaaatgaccgta 1232
>dbj|AB112480.2| Atriplex nummularia AnSAMS mRNA for S-adenosyl-L-methionine synthase, complete cds Length = 1667 Score = 48.1 bits (24), Expect = 0.020 Identities = 61/72 (84%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 297 ggcttctcccacttgaggggcttcacaacctcccagggtgaagtccgcgccatccctgcc 356 ||||||||||||||||||||||| ||| |||||| |||||||| ||| | ||||| || Sbjct: 1302 ggcttctcccacttgaggggcttgacagtctccca-tgtgaagtctgcgtcgtccctacc 1244 Query: 357 gaagtgcccgta 368 ||| || ||||| Sbjct: 1243 gaaatgaccgta 1232
>ref|NM_116415.2| Arabidopsis thaliana ATP binding / methionine adenosyltransferase AT4G01850 mRNA, complete cds Length = 1479 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Minus Query: 303 tcccacttgaggggcttcacaacctcccagg 333 ||||||||||| |||||||| |||||||||| Sbjct: 1262 tcccacttgagtggcttcacgacctcccagg 1232
>gb|DQ235185.1| Solanum tuberosum clone 164B03 S-adenosyl methionine synthase-like mRNA, complete cds Length = 1492 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 297 ggcttctcccacttgaggggcttcacaacctccca 331 ||||| ||||||||||||||||| ||||| ||||| Sbjct: 1288 ggcttttcccacttgaggggcttgacaacttccca 1254
>gb|DQ235184.1| Solanum tuberosum clone 164A02 S-adenosyl methionine synthase-like mRNA, complete cds Length = 1534 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 297 ggcttctcccacttgaggggcttcacaacctccca 331 ||||| ||||||||||||||||| ||||| ||||| Sbjct: 1296 ggcttttcccacttgaggggcttgacaacttccca 1262
>gb|AC007138.1| Arabidopsis thaliana BAC T7B11 from chromosome IV near 10 cM, complete sequence Length = 120185 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Plus Query: 303 tcccacttgaggggcttcacaacctcccagg 333 ||||||||||| |||||||| |||||||||| Sbjct: 39830 tcccacttgagtggcttcacgacctcccagg 39860
>gb|BT012699.1| Lycopersicon esculentum clone 113572R, mRNA sequence Length = 1526 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 297 ggcttctcccacttgaggggcttcacaacctccca 331 ||||| ||||||||||||||||| ||||| ||||| Sbjct: 1308 ggcttttcccacttgaggggcttgacaacttccca 1274
>gb|AY496094.1| Capsicum annuum S-adenosyl-L-methionine synthetase mRNA, complete cds Length = 668 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 297 ggcttctcccacttgaggggcttcacaacctccca 331 ||||| ||||||||||||||||| ||||| ||||| Sbjct: 472 ggcttttcccacttgaggggcttgacaacttccca 438
>gb|BT000575.1| Arabidopsis thaliana S-adenosylmethionine synthase 2 (At4g01850/T7B11_11) mRNA, complete cds Length = 1182 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Minus Query: 303 tcccacttgaggggcttcacaacctcccagg 333 ||||||||||| |||||||| |||||||||| Sbjct: 1166 tcccacttgagtggcttcacgacctcccagg 1136
>emb|Z24741.1|LESALMSGA L.esculentum S-adenosyl-L-methionine synthetase mRNA, complete CDS Length = 1479 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 297 ggcttctcccacttgaggggcttcacaacctccca 331 ||||| ||||||||||||||||| ||||| ||||| Sbjct: 1291 ggcttttcccacttgaggggcttgacaacttccca 1257
>emb|X80362.1|BJMSAMS B.juncea msams mRNA Length = 1474 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Minus Query: 303 tcccacttgaggggcttcacaacctcccagg 333 ||||||||||| |||||||| |||||||||| Sbjct: 1265 tcccacttgagtggcttcacgacctcccagg 1235
>emb|AL161493.2|ATCHRIV5 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 5 Length = 198220 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Plus Query: 303 tcccacttgaggggcttcacaacctcccagg 333 ||||||||||| |||||||| |||||||||| Sbjct: 25183 tcccacttgagtggcttcacgacctcccagg 25213
>gb|AY094454.1| Arabidopsis thaliana AT4g01850/T7B11_11 mRNA, complete cds Length = 1387 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Minus Query: 303 tcccacttgaggggcttcacaacctcccagg 333 ||||||||||| |||||||| |||||||||| Sbjct: 1257 tcccacttgagtggcttcacgacctcccagg 1227
>gb|AY072327.1| Arabidopsis thaliana S-adenosylmethionine synthase 2 (At4g01850; T7B11.11) mRNA, complete cds Length = 1438 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Minus Query: 303 tcccacttgaggggcttcacaacctcccagg 333 ||||||||||| |||||||| |||||||||| Sbjct: 1257 tcccacttgagtggcttcacgacctcccagg 1227
>gb|AF379015.1|AF379015 Brassica juncea clone MSAMS5 S-adenosylmethionine synthetase (MSAMS) mRNA, complete cds Length = 1429 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Minus Query: 303 tcccacttgaggggcttcacaacctcccagg 333 ||||||||||| |||||||| |||||||||| Sbjct: 1262 tcccacttgagtggcttcacgacctcccagg 1232
>gb|AF321001.1|AF321001 Suaeda maritima subsp. salsa S-adenosylmethionine sythetase 2 mRNA, complete cds Length = 1531 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 299 cttctcccacttgaggggcttcacaacctcccagg 333 ||||||||||||||||||||| ||| |||||||| Sbjct: 1278 cttctcccacttgaggggcttgacagtctcccagg 1244
>gb|AY089126.1| Arabidopsis thaliana clone 36518 mRNA, complete sequence Length = 1395 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Minus Query: 303 tcccacttgaggggcttcacaacctcccagg 333 ||||||||||| |||||||| |||||||||| Sbjct: 1260 tcccacttgagtggcttcacgacctcccagg 1230
>gb|U17241.1|ACU17241 Actinidia chinensis S-adenosylmethionine synthetase mRNA, partial cds Length = 1272 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 297 ggcttctcccacttgaggggcttcacaacctccca 331 ||||||||||| || ||||||||||| |||||||| Sbjct: 1074 ggcttctcccatttaaggggcttcaccacctccca 1040
>gb|AF271220.1| Brassica juncea S-adenosylmethionine synthetase gene, complete cds Length = 4459 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 307 acttgaggggcttcacaacctcccagg 333 ||||||| ||||||||||||||||||| Sbjct: 3436 acttgagtggcttcacaacctcccagg 3410
>gb|AF379013.1| Brassica juncea clone MSAMS3 S-adenosylmethionine synthetase (MSAMS) mRNA, complete cds Length = 1459 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Minus Query: 303 tcccacttgaggggcttcacaacctcccagg 333 ||||||||||| |||||||| |||||||||| Sbjct: 1274 tcccacttgagtggcttcacgacctcccagg 1244
>gb|AY567973.1| Brassica rapa subsp. pekinensis cultivar Seoul S-adenosyl-L-methionine synthetase (SAMS) mRNA, complete cds Length = 1182 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Minus Query: 303 tcccacttgaggggcttcacaacctcccagg 333 ||||||||||| |||||||| |||||||||| Sbjct: 1166 tcccacttgagtggcttcacgacctcccagg 1136
>emb|AM039894.1| Hordeum vulgare mRNA for putative AdoMet synthase 2 (sam2 gene) Length = 1297 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 307 acttgaggggcttcacaacctcccagg 333 |||||||||||||||| |||||||||| Sbjct: 1242 acttgaggggcttcaccacctcccagg 1216
>emb|AM039893.1| Hordeum vulgare sam1 gene for putative AdoMet synthase 1 Length = 1515 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 307 acttgaggggcttcacaacctcccagg 333 |||||||||||||||| |||||||||| Sbjct: 1246 acttgaggggcttcaccacctcccagg 1220
>gb|M33217.1|ATHSAM2 A.thaliana S-adenosylmethionine synthetase 2 (sam-2) gene, complete cds Length = 2401 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Minus Query: 303 tcccacttgaggggcttcacaacctcccagg 333 ||||||||||| |||||||| |||||||||| Sbjct: 1912 tcccacttgagtggcttcacgacctcccagg 1882
>dbj|D63835.1|BLYSAS Barley mRNA for S-adenosylmethionine synthetase, complete cds Length = 1353 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 307 acttgaggggcttcacaacctcccagg 333 |||||||||||||||| |||||||||| Sbjct: 1219 acttgaggggcttcaccacctcccagg 1193
>gb|AF531479.1| Carica papaya S-adenosylmethionine synthase (SAMS) mRNA, complete cds Length = 1886 Score = 44.1 bits (22), Expect = 0.32 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 296 aggcttctcccacttgaggggcttcacaacctcccagg 333 ||||||||||||||||| ||||||||| || ||||||| Sbjct: 1605 aggcttctcccacttga-gggcttcacgacttcccagg 1569
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 138 acacaagtagcacacccacgat 159 |||||||||||||||||||||| Sbjct: 1833608 acacaagtagcacacccacgat 1833587
>gb|AC114666.31| Mus musculus chromosome 5, clone RP24-175N6, complete sequence Length = 193158 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcagataagaacacaagtagc 148 ||||||||||||||||||||| Sbjct: 78388 gcagataagaacacaagtagc 78368
>gb|AY635050.1| Solanum brevidens S-adenosyl methionine synthase mRNA, complete cds Length = 1523 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 303 tcccacttgaggggcttcacaacctccca 331 ||||||||||||||||| ||||| ||||| Sbjct: 1274 tcccacttgaggggcttgacaacttccca 1246
>gb|AC027670.6| Homo sapiens chromosome 10 clone RP11-176H12, complete sequence Length = 191805 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 tatttcttggatagtttcaat 100 ||||||||||||||||||||| Sbjct: 99042 tatttcttggatagtttcaat 99022
>gb|AF356086.1| Cricetulus griseus fatty acid synthase mRNA, partial cds Length = 1201 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 cacttgaggggcttcacaacc 326 ||||||||||||||||||||| Sbjct: 206 cacttgaggggcttcacaacc 186
>gb|AY236337.1| Salvia miltiorrhiza S-adenosylmethionine synthetase mRNA, partial cds Length = 567 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 303 tcccacttgaggggcttcacaacctccca 331 ||||| ||||||||||| ||||||||||| Sbjct: 551 tcccatttgaggggcttgacaacctccca 523
>gb|AC102503.8| Mus musculus chromosome 16, clone RP24-383M8, complete sequence Length = 220467 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 tgacttgagcagataagaac 139 |||||||||||||||||||| Sbjct: 68885 tgacttgagcagataagaac 68904
>emb|X53323.1|ATSAMIGEN A.thaliana DNA for S-adenosylmethionine synthetase gene sam-1 Length = 2559 Score = 40.1 bits (20), Expect = 5.0 Identities = 60/72 (83%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 303 tcccacttgaggggcttcacaacctcccagggtgaagtccgcgccatccctgccgaagtg 362 ||||||||||| ||||| || || ||||| ||||||||| | | | ||||| |||||||| Sbjct: 1914 tcccacttgagtggcttgacgacttccca-ggtgaagtcagggtcgtcccttccgaagtg 1856 Query: 363 cccgtatgccgc 374 ||||| ||||| Sbjct: 1855 tccgtaagccgc 1844
>emb|AL355608.11| Human DNA sequence from clone RP11-567J2 on chromosome 9 Contains part of the ASTN2 gene for astrotactin 2 (KIAA0634) and a novel gene similar to ribosomal protein L10 (RPL10), complete sequence Length = 132590 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 aggcttctcccacttgaggg 315 |||||||||||||||||||| Sbjct: 49346 aggcttctcccacttgaggg 49327
>emb|Z71271.1|CRSAMS1 C.roseus mRNA for S-adenosyl-L-methionine synthetase 1 Length = 1534 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 300 ttctcccacttgaggggcttcacaacctccca 331 |||||||| ||||||||||| || |||||||| Sbjct: 1228 ttctcccatttgaggggcttaactacctccca 1197
>emb|AJ277206.1|CSI277206 Camellia sinensis gene for s-adenosylmethinonine synthetase Length = 1776 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcccacttgaggggcttcac 322 |||||||||||||||||||| Sbjct: 1279 tcccacttgaggggcttcac 1260
>gb|AC156617.8| Mus musculus chromosome 7, clone RP23-311N3, complete sequence Length = 203647 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 agagtggagagctatatttcttgg 89 |||| ||||||||||||||||||| Sbjct: 181014 agagaggagagctatatttcttgg 181037
>emb|CR385085.9| Zebrafish DNA sequence from clone CH211-195A16, complete sequence Length = 211060 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 atttcttggatagtttcaat 100 |||||||||||||||||||| Sbjct: 144538 atttcttggatagtttcaat 144557
>gb|AC096888.2| Homo sapiens chromosome 3 clone RP11-14D22, complete sequence Length = 176421 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 gtaaaactaattttattcag 266 |||||||||||||||||||| Sbjct: 148816 gtaaaactaattttattcag 148797
>dbj|AK046209.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230352L09 product:unclassifiable, full insert sequence Length = 1393 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 tgacttgagcagataagaac 139 |||||||||||||||||||| Sbjct: 898 tgacttgagcagataagaac 917
>emb|BX005463.5| Zebrafish DNA sequence from clone CH211-177H19 in linkage group 6, complete sequence Length = 163804 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 atttcttggatagtttcaat 100 |||||||||||||||||||| Sbjct: 60226 atttcttggatagtttcaat 60207
>emb|BX511192.4| Zebrafish DNA sequence from clone DKEYP-89C11 in linkage group 4, complete sequence Length = 154256 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 gttgcagcactggagcaatg 220 |||||||||||||||||||| Sbjct: 8757 gttgcagcactggagcaatg 8776
>emb|BX005107.4| Zebrafish DNA sequence from clone CH211-204F4 in linkage group 4, complete sequence Length = 187251 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 gttgcagcactggagcaatg 220 |||||||||||||||||||| Sbjct: 52898 gttgcagcactggagcaatg 52879
>gb|M62757.1|PUMSMS2A Parsley S-adenosylmethionine synthetase (SMS-2) mRNA, 3' end Length = 585 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 300 ttctcccacttgaggggcttcacaacctccca 331 |||||||| ||||| ||||||||||| ||||| Sbjct: 431 ttctcccatttgagaggcttcacaacttccca 400
>gb|M55077.1|ATHSAM A.thaliana S-adenosylmethionine synthetase gene, complete cds Length = 2559 Score = 40.1 bits (20), Expect = 5.0 Identities = 60/72 (83%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 303 tcccacttgaggggcttcacaacctcccagggtgaagtccgcgccatccctgccgaagtg 362 ||||||||||| ||||| || || ||||| ||||||||| | | | ||||| |||||||| Sbjct: 1914 tcccacttgagtggcttgacgacttccca-ggtgaagtcagggtcgtcccttccgaagtg 1856 Query: 363 cccgtatgccgc 374 ||||| ||||| Sbjct: 1855 tccgtaagccgc 1844
>dbj|AB041534.1| Camellia sinensis SAM mRNA for s-adenosylmethionine synthetase, complete cds Length = 1303 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcccacttgaggggcttcac 322 |||||||||||||||||||| Sbjct: 1174 tcccacttgaggggcttcac 1155 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,788,252 Number of Sequences: 3902068 Number of extensions: 2788252 Number of successful extensions: 49903 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 49773 Number of HSP's gapped (non-prelim): 124 length of query: 375 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 353 effective length of database: 17,147,199,772 effective search space: 6052961519516 effective search space used: 6052961519516 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)