>gb|AC159288.4| Mus musculus BAC clone RP23-300L21 from chromosome 7, complete sequence
          Length = 201500

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     ggccaacacaacacaagaag 81
              ||||||||||||||||||||
Sbjct: 133838 ggccaacacaacacaagaag 133819

>gb|AC055772.16| Mus musculus chromosome 12, clone RP23-291K4, complete sequence
          Length = 168350

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 12     cttttttattcttcacaagttacc 35
              ||||||||||||||| ||||||||
Sbjct: 138560 cttttttattcttcataagttacc 138537

>gb|U29535.3| Caenorhabditis elegans cosmid C25H3, complete sequence
          Length = 42009

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 65   caacacaacacaagaagaaa 84
            ||||||||||||||||||||
Sbjct: 5606 caacacaacacaagaagaaa 5625

>gb|AC146745.20| Medicago truncatula clone mth2-53p19, complete sequence
          Length = 121952

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     caacacaacacaagaagaaa 84
              ||||||||||||||||||||
Sbjct: 109892 caacacaacacaagaagaaa 109911

>gb|AC149637.11| Medicago truncatula clone mth2-181h2, complete sequence
          Length = 116616

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    caacacaacacaagaagaaa 84
             ||||||||||||||||||||
Sbjct: 31394 caacacaacacaagaagaaa 31413

>dbj|AK140771.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130014B10 product:zinc finger, FYVE
            domain containing 1, full insert sequence
          Length = 4356

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 12   cttttttattcttcacaagttacc 35
            ||||||||||||||| ||||||||
Sbjct: 2065 cttttttattcttcataagttacc 2042

>gb|AC021393.10| Homo sapiens chromosome 8, clone RP11-27P7, complete sequence
          Length = 150858

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   aaggctatctctcgcatctg 139
             ||||||||||||||||||||
Sbjct: 76746 aaggctatctctcgcatctg 76765

>emb|AL671919.9| Mouse DNA sequence from clone RP23-400A17 on chromosome X, complete
             sequence
          Length = 180436

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    ttttttattcttcacaagtt 32
             ||||||||||||||||||||
Sbjct: 78297 ttttttattcttcacaagtt 78316

>ref|NM_001031379.1| Gallus gallus small glutamine-rich tetratricopeptide repeat
            (TPR)-containing, alpha (SGTA), mRNA
          Length = 2422

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 16   tttattcttcacaagttac 34
            |||||||||||||||||||
Sbjct: 2392 tttattcttcacaagttac 2374

>gb|AC140927.2| Mus musculus BAC clone RP23-409D19 from chromosome 5, complete sequence
          Length = 209257

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 14    tttttattcttcacaagtt 32
             |||||||||||||||||||
Sbjct: 98500 tttttattcttcacaagtt 98482

>gb|AC146600.4| Mus musculus BAC clone RP23-386G7 from chromosome 17, complete sequence
          Length = 198403

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 14    tttttattcttcacaagtt 32
             |||||||||||||||||||
Sbjct: 78609 tttttattcttcacaagtt 78627

>gb|AC122377.4| Mus musculus BAC clone RP23-473B13 from chromosome 17, complete sequence
          Length = 174143

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 14     tttttattcttcacaagtt 32
              |||||||||||||||||||
Sbjct: 162719 tttttattcttcacaagtt 162701

>ref|XM_810181.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508857.100) partial mRNA
          Length = 2580

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 3    tctgcctcgcttttttattcttc 25
            |||||||| ||||||||||||||
Sbjct: 1255 tctgcctcccttttttattcttc 1233

>ref|XM_647408.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (116.t00017)
            partial mRNA
          Length = 2661

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 67   acacaacacaagaagaaag 85
            |||||||||||||||||||
Sbjct: 2216 acacaacacaagaagaaag 2234

>emb|AJ721018.1| Gallus gallus mRNA for hypothetical protein, clone 32j5
          Length = 2422

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 16   tttattcttcacaagttac 34
            |||||||||||||||||||
Sbjct: 2392 tttattcttcacaagttac 2374

>gb|AC025207.5| Homo sapiens chromosome 8, clone RP11-193J8, complete sequence
          Length = 157375

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 80   agaaagcgacgggaagaca 98
            |||||||||||||||||||
Sbjct: 1113 agaaagcgacgggaagaca 1095

>emb|BX571850.7| Zebrafish DNA sequence from clone DKEY-259L18 in linkage group 23,
             complete sequence
          Length = 236136

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    ggccaacacaacacaagaagaaa 84
             |||||| ||||||||||||||||
Sbjct: 88996 ggccaagacaacacaagaagaaa 89018

>gb|AC155936.7| Mus musculus 10 BAC RP24-397C20 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 177791

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 59     tttggccaacacaacacaa 77
              |||||||||||||||||||
Sbjct: 124278 tttggccaacacaacacaa 124260

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 67       acacaacacaagaagaaag 85
                |||||||||||||||||||
Sbjct: 20032246 acacaacacaagaagaaag 20032264

>dbj|AP004810.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1068H08
          Length = 152794

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 67    acacaacacaagaagaaag 85
             |||||||||||||||||||
Sbjct: 20520 acacaacacaagaagaaag 20538

>dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1018E06
          Length = 178499

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 67     acacaacacaagaagaaag 85
              |||||||||||||||||||
Sbjct: 170586 acacaacacaagaagaaag 170604

>gb|AC154822.2| Mus musculus BAC clone RP24-537L18 from 13, complete sequence
          Length = 167628

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 60    ttggccaacacaacacaag 78
             |||||||||||||||||||
Sbjct: 10038 ttggccaacacaacacaag 10020

>emb|AL929035.14| Mouse DNA sequence from clone RP23-234F15 on chromosome 2, complete
             sequence
          Length = 171936

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 68    cacaacacaagaagaaagc 86
             |||||||||||||||||||
Sbjct: 10352 cacaacacaagaagaaagc 10334

>dbj|AP003548.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1448A5
          Length = 178420

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 80   agaaagcgacgggaagaca 98
            |||||||||||||||||||
Sbjct: 2735 agaaagcgacgggaagaca 2717

>dbj|AP003465.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1043D8
          Length = 230879

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 80     agaaagcgacgggaagaca 98
              |||||||||||||||||||
Sbjct: 225738 agaaagcgacgggaagaca 225720


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,094,252
Number of Sequences: 3902068
Number of extensions: 1094252
Number of successful extensions: 82414
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82360
Number of HSP's gapped (non-prelim): 54
length of query: 143
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 122
effective length of database: 17,151,101,840
effective search space: 2092434424480
effective search space used: 2092434424480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)