ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet29b02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanase (EC... 819 0.0
2emb|X56260.1|HVGLUEND Barley DNA for (1,3;1,4)-beta-glucanase.(E... 791 0.0
3emb|X56775.1|HVGLB1 H.vulgare Glb 1 gene for 1-3,1-4-beta-D-gluc... 775 0.0
4emb|Z22873.1|TABETGLUA T.aestivum beta glucanase mRNA, complete CDS 349 4e-93
5emb|Z22874.1|TABETGLUB T.aestivum (1,3;1,4) beta glucanase mRNA,... 329 4e-87
6gb|AY768944.1| Oryza sativa (japonica cultivar-group) endo-1,3;1... 72 2e-09
7gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
8emb|X58877.1|OSGNS1 Oryza sativa gns1 gene for beta-glucanase 72 2e-09
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
10gb|AF323610.1|AF323610 Oryza sativa glucanase (GLU) mRNA, comple... 72 2e-09
11dbj|AK121825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
12dbj|AK060867.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
13emb|Z15131.1|ASBGLUCAN A.sativa mRNA for beta glucanase 70 6e-09
14ref|XM_475161.1| Oryza sativa (japonica cultivar-group), predic... 68 2e-08
15gb|AY109289.1| Zea mays PCO135820 mRNA sequence 68 2e-08
16gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-gluc... 60 6e-06
17gb|AF241159.1| Trypanosoma cruzi clone FGz 73 kinetoplast minici... 46 0.090
18emb|AL355303.16| Human DNA sequence from clone RP11-445P17 on ch... 44 0.35
19gb|AC127354.4| Mus musculus BAC clone RP23-91C8 from chromosome ... 42 1.4
20gb|AC022675.7| Mus musculus chromosome 1, clone RP23-59N15, comp... 42 1.4
21gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
22gb|AC132955.3| Mus musculus BAC clone RP24-266J20 from chromosom... 42 1.4
23dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
24dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
25gb|AF433637.1| Oryza sativa clone OsMu10-1 transposon Mu-like re... 42 1.4
26gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
27gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
28emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.4
29emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on ch... 42 1.4
30gb|AC164981.2| Mus musculus BAC clone RP23-121F5 from chromosome... 40 5.5
31gb|AC132446.3| Mus musculus BAC clone RP23-175K4 from chromosome... 40 5.5
32gb|AC068006.10| Mus musculus chromosome 7, clone RP23-6I17, comp... 40 5.5
33gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.5
34gb|AC113476.20| Mus musculus chromosome 17, clone RP23-304J1, co... 40 5.5
35gb|AC108477.5| Homo sapiens BAC clone RP11-499F19 from 4, comple... 40 5.5
36emb|CR383660.9| Zebrafish DNA sequence from clone DKEY-1H22 in l... 40 5.5
37emb|AL096803.8|HSBG304P7 Human DNA sequence from clone GS1-304P7... 40 5.5
38emb|AL645527.20| Mouse DNA sequence from clone RP23-26L6 on chro... 40 5.5
39emb|AL008970.3|PFMAL3P4 Plasmodium falciparum MAL3P4 40 5.5
40emb|AJ276505.2|MMU276505 Mus musculus genomic fragment, 281000 b... 40 5.5
41emb|BX511155.25| Zebrafish DNA sequence from clone DKEY-56D18 in... 40 5.5
42emb|BX548054.19| Zebrafish DNA sequence from clone CH211-237N4 i... 40 5.5
43gb|AC068892.7| Homo sapiens chromosome 10 clone RP11-116D21, com... 40 5.5
44gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 geno... 40 5.5
45dbj|AK086225.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 40 5.5
46dbj|AK086224.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 40 5.5
47gb|AC158635.6| Mus musculus 10 BAC RP23-396A23 (Roswell Park Can... 40 5.5
48dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
49dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
50gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic ... 40 5.5
51gb|AC084659.1|CBRG46N07 Caenorhabditis briggsae cosmid G46N07, c... 40 5.5
52ref|XM_573224.1| PREDICTED: Rattus norvegicus similar to Lethal ... 40 5.5
53gb|AY009938.2| Hordeum vulgare subsp. vulgare MLA1-2 (Mla1-2) ge... 40 5.5
54emb|BX005258.11| Zebrafish DNA sequence from clone DKEY-77I24 in... 40 5.5
55gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
56gb|AC153605.2| Mus musculus 6 BAC RP23-346H23 (Roswell Park Canc... 40 5.5
57dbj|D86600.2| Loligo bleekeri mRNA for voltage-dependent calcium... 40 5.5 
>emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanase (EC 3.2.1.73)
          Length = 6260

 Score =  819 bits (413), Expect = 0.0
 Identities = 413/413 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    ataggaatattcggtcttcgccgatatatttcatactttattattttggacaaatttcgt 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5850 ataggaatattcggtcttcgccgatatatttcatactttattattttggacaaatttcgt 5791

                                                                        
Query: 61   caagttttgacgaaattttgaaccctacaatatagttcctaggtacgcacacatgcgtgt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5790 caagttttgacgaaattttgaaccctacaatatagttcctaggtacgcacacatgcgtgt 5731

                                                                        
Query: 121  acgtatcaagtgcatgatcaatcgaggaagggggagcgtttgcatatgcttcccttccat 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5730 acgtatcaagtgcatgatcaatcgaggaagggggagcgtttgcatatgcttcccttccat 5671

                                                                        
Query: 181  cgaaaatcatacgtactggtacactagtatagcaagccactactactcgcgtacgcatct 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5670 cgaaaatcatacgtactggtacactagtatagcaagccactactactcgcgtacgcatct 5611

                                                                        
Query: 241  gagctgcctcagcggtcgcatcccaagttcccaacccaagccctgtacaatacataatgt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5610 gagctgcctcagcggtcgcatcccaagttcccaacccaagccctgtacaatacataatgt 5551

                                                                        
Query: 301  gcgcatacgtacggcgtacacgctcttatacgcgcgcgcgtacgtacggacatacgggca 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5550 gcgcatacgtacggcgtacacgctcttatacgcgcgcgcgtacgtacggacatacgggca 5491

                                                                 
Query: 361  ctaggtagctgctacctcatcagaagctgatggggtagacgtgctgcatgttg 413
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5490 ctaggtagctgctacctcatcagaagctgatggggtagacgtgctgcatgttg 5438
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>emb|X56260.1|HVGLUEND Barley DNA for (1,3;1,4)-beta-glucanase.(EC number 3.2.1.73)
          Length = 4643

 Score =  791 bits (399), Expect = 0.0
 Identities = 410/413 (99%), Gaps = 3/413 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    ataggaatattcggtcttcgccgatatatttcatactttattattttggacaaatttcgt 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4440 ataggaatattcggtcttcgccgatatatttcatactttattattttggacaaatttcgt 4381

                                                                        
Query: 61   caagttttgacgaaattttgaaccctacaatatagttcctaggtacgcacacatgcgtgt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4380 caagttttgacgaaattttgaaccctacaatatagttcctaggtacgcacacatgcgtgt 4321

                                                                        
Query: 121  acgtatcaagtgcatgatcaatcgaggaagggggagcgtttgcatatgcttcccttccat 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4320 acgtatcaagtgcatgatcaatcgaggaagggggagcgtttgcatatgcttcccttccat 4261

                                                                        
Query: 181  cgaaaatcatacgtactggtacactagtatagcaagccactactactcgcgtacgcatct 240
            ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 4260 cgaaaatcatacgtactggtacactagtatagcaagcc---actactcgcgtacgcatct 4204

                                                                        
Query: 241  gagctgcctcagcggtcgcatcccaagttcccaacccaagccctgtacaatacataatgt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4203 gagctgcctcagcggtcgcatcccaagttcccaacccaagccctgtacaatacataatgt 4144

                                                                        
Query: 301  gcgcatacgtacggcgtacacgctcttatacgcgcgcgcgtacgtacggacatacgggca 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4143 gcgcatacgtacggcgtacacgctcttatacgcgcgcgcgtacgtacggacatacgggca 4084

                                                                 
Query: 361  ctaggtagctgctacctcatcagaagctgatggggtagacgtgctgcatgttg 413
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4083 ctaggtagctgctacctcatcagaagctgatggggtagacgtgctgcatgttg 4031
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>emb|X56775.1|HVGLB1 H.vulgare Glb 1 gene for 1-3,1-4-beta-D-glucanase
          Length = 4849

 Score =  775 bits (391), Expect = 0.0
 Identities = 409/413 (99%), Gaps = 4/413 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    ataggaatattcggtcttcgccgatatatttcatactttattattttggacaaatttcgt 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4839 ataggaatattcggtcttcgccgatatatttcatactttattattttggacaaatttcgt 4780

                                                                        
Query: 61   caagttttgacgaaattttgaaccctacaatatagttcctaggtacgcacacatgcgtgt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4779 caagttttgacgaaattttgaaccctacaatatagttcctaggtacgcacacatgcgtgt 4720

                                                                        
Query: 121  acgtatcaagtgcatgatcaatcgaggaagggggagcgtttgcatatgcttcccttccat 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4719 acgtatcaagtgcatgatcaatcgaggaagggggagcgtttgcatatgcttcccttccat 4660

                                                                        
Query: 181  cgaaaatcatacgtactggtacactagtatagcaagccactactactcgcgtacgcatct 240
            ||||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||
Sbjct: 4659 cgaaaatcatacgtactggtacactagtatagcaagcc---actactcgcgtacg-atct 4604

                                                                        
Query: 241  gagctgcctcagcggtcgcatcccaagttcccaacccaagccctgtacaatacataatgt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4603 gagctgcctcagcggtcgcatcccaagttcccaacccaagccctgtacaatacataatgt 4544

                                                                        
Query: 301  gcgcatacgtacggcgtacacgctcttatacgcgcgcgcgtacgtacggacatacgggca 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4543 gcgcatacgtacggcgtacacgctcttatacgcgcgcgcgtacgtacggacatacgggca 4484

                                                                 
Query: 361  ctaggtagctgctacctcatcagaagctgatggggtagacgtgctgcatgttg 413
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4483 ctaggtagctgctacctcatcagaagctgatggggtagacgtgctgcatgttg 4431
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>emb|Z22873.1|TABETGLUA T.aestivum beta glucanase mRNA, complete CDS
          Length = 1434

 Score =  349 bits (176), Expect = 4e-93
 Identities = 367/427 (85%), Gaps = 34/427 (7%)
 Strand = Plus / Minus

                                                                        
Query: 1    ataggaata-ttcggtcttcgccgatatatttcatactttattattttggacaaatttcg 59
            ||||||||| |||||||| |||||||||||||||||     |||||||||||||||||||
Sbjct: 1414 ataggaatacttcggtct-cgccgatatatttcata-----ttattttggacaaatttcg 1361

                                                                        
Query: 60   tcaagttttgacgaaattttgaaccctacaatatagttcctaggtacgcacacatgcgtg 119
            |||||||||||||||||||||||||||||||||||||| |||  |||||||||||| |||
Sbjct: 1360 tcaagttttgacgaaattttgaaccctacaatatagtt-ctacttacgcacacatgtgtg 1302

                                                                        
Query: 120  tacgtatcaagtgcatgatcaatcgaggaagggggagcgtttgcatatgcttcccttcca 179
            | |||||||| |||||||| |||||| |||||| |||||||| ||| |||  ||||||||
Sbjct: 1301 tgcgtatcaaatgcatgatgaatcgacgaagggagagcgtttacatctgccccccttcca 1242

                                                                        
Query: 180  tcgaaaatcatacgtactggtacactagtatagcaagccactactactcgcgtacgcatc 239
            ||| |||||||||  |    ||||||| |||||||| ||||||||| |||||||||| ||
Sbjct: 1241 tcgtaaatcatacaca----tacactactatagcaaaccactacta-tcgcgtacgcgtc 1187

                                                                        
Query: 240  tgagctgcctcagcggtcgcatcccaagttcccaacccaagccctgtacaatacataatg 299
            ||||||||||||||||||||| |        |||||||||||||||||||||||||||||
Sbjct: 1186 tgagctgcctcagcggtcgcacc--------ccaacccaagccctgtacaatacataatg 1135

                                                                        
Query: 300  tgcgcatacgtacggcgtacacgctcttatacg------cgcgcgcgtacgtacggacat 353
            ||| |||||||||||| ||||||||||||||||      |||||||||||| ||||||||
Sbjct: 1134 tgcacatacgtacggcatacacgctcttatacgcgtgtacgcgcgcgtacggacggacat 1075

                                                                        
Query: 354  acgggcactaggta-------gctgctacctcatcagaagctgatggggtagacgtgctg 406
            |||| |||||| ||       || |||| |||||||||||||||||||||||||||||||
Sbjct: 1074 acggacactagctacgcatacgcagctagctcatcagaagctgatggggtagacgtgctg 1015

                   
Query: 407  catgttg 413
            |||||||
Sbjct: 1014 catgttg 1008
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>emb|Z22874.1|TABETGLUB T.aestivum (1,3;1,4) beta glucanase mRNA, complete CDS
          Length = 1426

 Score =  329 bits (166), Expect = 4e-87
 Identities = 349/409 (85%), Gaps = 32/409 (7%)
 Strand = Plus / Minus

                                                                        
Query: 18   tcgccgatatatttcatactttattattttggacaaatttcgtcaagttttgacgaaatt 77
            ||||||||||||||||||     |||||||||||||||| |||||| |||||||||||||
Sbjct: 1411 tcgccgatatatttcata-----ttattttggacaaattccgtcaaattttgacgaaatt 1357

                                                                        
Query: 78   ttgaaccctacaatatagttcctaggtacgcacacatgcgtgtacgtatcaagtgcatga 137
            ||||||||||||||||||||| ||  |||||||||||| ||||||||||||| || ||||
Sbjct: 1356 ttgaaccctacaatatagttc-tacttacgcacacatgtgtgtacgtatcaaatgtatga 1298

                                                                        
Query: 138  tcaatcgaggaagggggagcgtttgcatatgcttcccttccatcgaaaatcatacgtact 197
            | |||||| |||||| |||||||| ||| |||||||||||||||| |||||||||  |  
Sbjct: 1297 tgaatcgacgaagggagagcgtttacatctgcttcccttccatcgtaaatcatacaca-- 1240

                                                                        
Query: 198  ggtacactagtatagcaagccactactactcgcgtacgcatctgagctgcctcagcggtc 257
              ||||||| || ||||| ||||||||| | |||||||||||||||||||||||||||||
Sbjct: 1239 --tacactactacagcaaaccactacta-tagcgtacgcatctgagctgcctcagcggtc 1183

                                                                        
Query: 258  gcatcccaagttcccaacccaagccctgtacaatacataatgtgcgcatacgtacggcgt 317
            ||| |        ||||||||| |||||||||||||||||||||| ||||||||| || |
Sbjct: 1182 gcacc--------ccaacccaaaccctgtacaatacataatgtgcacatacgtaccgcat 1131

                                                                        
Query: 318  acacgctcttatacg------cgcgcgcgtacgtacggacatacgggcactaggta---- 367
            |||||||||||||||      ||||||||||||||||||||||||| |||||| ||    
Sbjct: 1130 acacgctcttatacgcgtgtacgcgcgcgtacgtacggacatacggacactagctacgca 1071

                                                             
Query: 368  ---gctgctacctcatcagaagctgatggggtagacgtgctgcatgttg 413
               || |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1070 tacgcagctagctcatcagaagctgatggggtagacgtgctgcatgttg 1022
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>gb|AY768944.1| Oryza sativa (japonica cultivar-group) endo-1,3;1,4-beta-glucanase
            mRNA, complete cds
          Length = 1579

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                                
Query: 378  catcagaagctgatggggtagacgtgctgcatgttg 413
            ||||||||||||||||||||||||||||||||||||
Sbjct: 1118 catcagaagctgatggggtagacgtgctgcatgttg 1083
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>gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_E12,
             complete sequence
          Length = 121293

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                                 
Query: 378   catcagaagctgatggggtagacgtgctgcatgttg 413
             ||||||||||||||||||||||||||||||||||||
Sbjct: 93193 catcagaagctgatggggtagacgtgctgcatgttg 93228
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>emb|X58877.1|OSGNS1 Oryza sativa gns1 gene for beta-glucanase
          Length = 6614

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                                
Query: 378  catcagaagctgatggggtagacgtgctgcatgttg 413
            ||||||||||||||||||||||||||||||||||||
Sbjct: 5440 catcagaagctgatggggtagacgtgctgcatgttg 5405
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                                    
Query: 378      catcagaagctgatggggtagacgtgctgcatgttg 413
                ||||||||||||||||||||||||||||||||||||
Sbjct: 17962444 catcagaagctgatggggtagacgtgctgcatgttg 17962479
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>gb|AF323610.1|AF323610 Oryza sativa glucanase (GLU) mRNA, complete cds
          Length = 1573

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                                
Query: 378  catcagaagctgatggggtagacgtgctgcatgttg 413
            ||||||||||||||||||||||||||||||||||||
Sbjct: 1104 catcagaagctgatggggtagacgtgctgcatgttg 1069
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>dbj|AK121825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099G01, full
            insert sequence
          Length = 1606

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                                
Query: 378  catcagaagctgatggggtagacgtgctgcatgttg 413
            ||||||||||||||||||||||||||||||||||||
Sbjct: 1138 catcagaagctgatggggtagacgtgctgcatgttg 1103
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>dbj|AK060867.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H03, full
            insert sequence
          Length = 1565

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                                
Query: 378  catcagaagctgatggggtagacgtgctgcatgttg 413
            ||||||||||||||||||||||||||||||||||||
Sbjct: 1134 catcagaagctgatggggtagacgtgctgcatgttg 1099
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>emb|Z15131.1|ASBGLUCAN A.sativa mRNA for beta glucanase
          Length = 1448

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 379  atcagaagctgatggggtagacgtgctgcatgttg 413
            |||||||||||||||||||||||||||||||||||
Sbjct: 1033 atcagaagctgatggggtagacgtgctgcatgttg 999



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 39/42 (92%), Gaps = 1/42 (2%)
 Strand = Plus / Minus

                                                      
Query: 292  acataatgtgcgcatacgtacggcgtacacgctcttatacgc 333
            ||||||||||| ||||||||| |||||||||| |||||||||
Sbjct: 1139 acataatgtgcacatacgtac-gcgtacacgcccttatacgc 1099
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>ref|XM_475161.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1005

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 34/34 (100%)
 Strand = Plus / Minus

                                              
Query: 380  tcagaagctgatggggtagacgtgctgcatgttg 413
            ||||||||||||||||||||||||||||||||||
Sbjct: 1005 tcagaagctgatggggtagacgtgctgcatgttg 972
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>gb|AY109289.1| Zea mays PCO135820 mRNA sequence
          Length = 976

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 34/34 (100%)
 Strand = Plus / Minus

                                             
Query: 380 tcagaagctgatggggtagacgtgctgcatgttg 413
           ||||||||||||||||||||||||||||||||||
Sbjct: 482 tcagaagctgatggggtagacgtgctgcatgttg 449
to top
>gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-glucanohydrolase (Glb 2)
            gene, intron 1
          Length = 5159

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 380  tcagaagctgatggggtagacgtgctgcatgttg 413
            ||||||| ||||||||||||||||||||||||||
Sbjct: 4992 tcagaagttgatggggtagacgtgctgcatgttg 4959
to top
>gb|AF241159.1| Trypanosoma cruzi clone FGz 73 kinetoplast minicircle DNA, partial
           sequence
          Length = 322

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 61  caagttttgacgaaattttgaacccta 87
           |||||||| ||||||||||||||||||
Sbjct: 263 caagttttcacgaaattttgaacccta 237
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>emb|AL355303.16| Human DNA sequence from clone RP11-445P17 on chromosome 10 Contains the
             5' end of the gene for a novel protein similar to
             aldo-keto reductase, the AKR1C4 gene for aldo-keto
             reductase family 1 member C4, a novel gene, an aldo-keto
             reductase pseudogene, a ribosomal protein L26 (RPL26)
             pseudogene, an ADP-ribosylation factor-like 4 (ARL4)
             pseudogene,. a novel gene and a CpG island, complete
             sequence
          Length = 145692

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 26    atatttcatactttattatttt 47
             ||||||||||||||||||||||
Sbjct: 71075 atatttcatactttattatttt 71054
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>gb|AC127354.4| Mus musculus BAC clone RP23-91C8 from chromosome 6, complete sequence
          Length = 197318

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 74     aattttgaaccctacaatata 94
              |||||||||||||||||||||
Sbjct: 195991 aattttgaaccctacaatata 196011
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>gb|AC022675.7| Mus musculus chromosome 1, clone RP23-59N15, complete sequence
          Length = 181063

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 288   caatacataatgtgcgcatac 308
             |||||||||||||||||||||
Sbjct: 45217 caatacataatgtgcgcatac 45237
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>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0007B15 map S10318, complete sequence
          Length = 125243

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 259   catcccaagttcccaacccaa 279
             |||||||||||||||||||||
Sbjct: 25470 catcccaagttcccaacccaa 25490
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>gb|AC132955.3| Mus musculus BAC clone RP24-266J20 from chromosome 6, complete sequence
          Length = 174507

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 74     aattttgaaccctacaatata 94
              |||||||||||||||||||||
Sbjct: 159500 aattttgaaccctacaatata 159480
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 27       tatttcatactttattatttt 47
                |||||||||||||||||||||
Sbjct: 25532465 tatttcatactttattatttt 25532485
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 259     catcccaagttcccaacccaa 279
               |||||||||||||||||||||
Sbjct: 3431515 catcccaagttcccaacccaa 3431535
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>gb|AF433637.1| Oryza sativa clone OsMu10-1 transposon Mu-like repeat region
          Length = 1143

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 259 catcccaagttcccaacccaa 279
           |||||||||||||||||||||
Sbjct: 825 catcccaagttcccaacccaa 805
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 259     catcccaagttcccaacccaa 279
               |||||||||||||||||||||
Sbjct: 3440219 catcccaagttcccaacccaa 3440239
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 27       tatttcatactttattatttt 47
                |||||||||||||||||||||
Sbjct: 25460641 tatttcatactttattatttt 25460661
to top
>emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa0070E09 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 144084

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 27     tatttcatactttattatttt 47
              |||||||||||||||||||||
Sbjct: 101847 tatttcatactttattatttt 101867
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>emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on chromosome 1, complete
              sequence
          Length = 182054

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 288    caatacataatgtgcgcatac 308
              |||||||||||||||||||||
Sbjct: 176184 caatacataatgtgcgcatac 176164
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>gb|AC164981.2| Mus musculus BAC clone RP23-121F5 from chromosome 17, complete sequence
          Length = 243701

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     tatatttcatactttattat 44
              ||||||||||||||||||||
Sbjct: 236227 tatatttcatactttattat 236246
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>gb|AC132446.3| Mus musculus BAC clone RP23-175K4 from chromosome 12, complete sequence
          Length = 190088

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    actttattattttggacaaa 54
             ||||||||||||||||||||
Sbjct: 57061 actttattattttggacaaa 57042
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>gb|AC068006.10| Mus musculus chromosome 7, clone RP23-6I17, complete sequence
          Length = 203141

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 263   ccaagttcccaacccaagcc 282
             ||||||||||||||||||||
Sbjct: 97502 ccaagttcccaacccaagcc 97521
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 261      tcccaagttcccaacccaag 280
                ||||||||||||||||||||
Sbjct: 34127748 tcccaagttcccaacccaag 34127729
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>gb|AC113476.20| Mus musculus chromosome 17, clone RP23-304J1, complete sequence
          Length = 227026

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     tatatttcatactttattat 44
              ||||||||||||||||||||
Sbjct: 170499 tatatttcatactttattat 170480
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>gb|AC108477.5| Homo sapiens BAC clone RP11-499F19 from 4, complete sequence
          Length = 164194

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    accctacaatatagttccta 101
             ||||||||||||||||||||
Sbjct: 94347 accctacaatatagttccta 94366
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>emb|CR383660.9| Zebrafish DNA sequence from clone DKEY-1H22 in linkage group 14,
             complete sequence
          Length = 139631

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    tttcatactttattattttg 48
             ||||||||||||||||||||
Sbjct: 38431 tttcatactttattattttg 38450
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>emb|AL096803.8|HSBG304P7 Human DNA sequence from clone GS1-304P7 on chromosome 1q25.1-31.1
              Contains a zinc-finger protein pseudogene and a novel
              pseudogene, complete sequence
          Length = 129723

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    tcccaagttcccaacccaag 280
              ||||||||||||||||||||
Sbjct: 114305 tcccaagttcccaacccaag 114324
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>emb|AL645527.20| Mouse DNA sequence from clone RP23-26L6 on chromosome 11 Contains the
              Vamp2 gene for vesicle-associated membrane 2, the Per1 gene
              for period homolog 1 (Drosophila), the Hes7 gene for hairy
              and enhancer of split 7 (Drosophila), the Aloxe3 gene for
              arachidonate lipoxygenase 3, the Alox12b gene for
              arachidonate 12-lipoxygenase 12R type, the Alox15b gene for
              arachidonate 15-lipoxygenase second type, the Gucy2e gene
              for guanylate cyclase 2e, a novel gene, the gene for
              LYST-interacting protein LIP8 (Lip8-pending), the gene for
              the likely ortholog of H. sapiens trafficking protein
              particle complex 1 (TRAPPC1)), the Kcnab3 gene for
              potassium voltage-gated channel shaker-related subfamily
              beta member 3, a novel gene, the 3' end of the Chd3 gene
              for chromodomain helicase DNA binding protein 3 and six CpG
              islands, complete sequence
          Length = 261224

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     aaccctacaatatagttcct 100
              ||||||||||||||||||||
Sbjct: 121051 aaccctacaatatagttcct 121070
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>emb|AL008970.3|PFMAL3P4 Plasmodium falciparum MAL3P4
          Length = 113880

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 27   tatttcatactttattattt 46
            ||||||||||||||||||||
Sbjct: 2518 tatttcatactttattattt 2537
to top
>emb|AJ276505.2|MMU276505 Mus musculus genomic fragment, 281000 bp, chromosome 7
          Length = 281000

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    ccaagttcccaacccaagcc 282
              ||||||||||||||||||||
Sbjct: 125367 ccaagttcccaacccaagcc 125348
to top
>emb|BX511155.25| Zebrafish DNA sequence from clone DKEY-56D18 in linkage group 19,
              complete sequence
          Length = 205235

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     atttcatactttattatttt 47
              ||||||||||||||||||||
Sbjct: 190045 atttcatactttattatttt 190026
to top
>emb|BX548054.19| Zebrafish DNA sequence from clone CH211-237N4 in linkage group 14,
             complete sequence
          Length = 128658

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    tttcatactttattattttg 48
             ||||||||||||||||||||
Sbjct: 79505 tttcatactttattattttg 79486
to top
>gb|AC068892.7| Homo sapiens chromosome 10 clone RP11-116D21, complete sequence
          Length = 161178

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 40    attattttggacaaatttcgtcaa 63
             ||||||||||||||||||| ||||
Sbjct: 22782 attattttggacaaatttcctcaa 22805
to top
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete
             sequence
          Length = 141307

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 259   catcccaagttcccaaccca 278
             ||||||||||||||||||||
Sbjct: 31976 catcccaagttcccaaccca 31957
to top
>dbj|AK086225.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:D930014O14 product:unclassifiable, full
           insert sequence
          Length = 2796

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 26  atatttcatactttattatt 45
           ||||||||||||||||||||
Sbjct: 596 atatttcatactttattatt 577
to top
>dbj|AK086224.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:D930014O13 product:unclassifiable, full
           insert sequence
          Length = 2795

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 26  atatttcatactttattatt 45
           ||||||||||||||||||||
Sbjct: 596 atatttcatactttattatt 577
to top
>gb|AC158635.6| Mus musculus 10 BAC RP23-396A23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 183931

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    ctttattattttggacaaat 55
             ||||||||||||||||||||
Sbjct: 86054 ctttattattttggacaaat 86035
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 259      catcccaagttcccaaccca 278
                ||||||||||||||||||||
Sbjct: 21717293 catcccaagttcccaaccca 21717274
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 261      tcccaagttcccaacccaag 280
                ||||||||||||||||||||
Sbjct: 34218220 tcccaagttcccaacccaag 34218201
to top
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete
             sequence
          Length = 163828

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   tcccaagttcccaacccaag 280
             ||||||||||||||||||||
Sbjct: 91560 tcccaagttcccaacccaag 91541
to top
>gb|AC084659.1|CBRG46N07 Caenorhabditis briggsae cosmid G46N07, complete sequence
          Length = 13350

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 25   tatatttcatactttattattttg 48
            ||||||||||||||| ||||||||
Sbjct: 990  tatatttcatactttgttattttg 1013
to top
>ref|XM_573224.1| PREDICTED: Rattus norvegicus similar to Lethal giant larvae homolog
           2 (LOC360661), mRNA
          Length = 8565

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 242 agctgcctcagcggtcgcat 261
           ||||||||||||||||||||
Sbjct: 773 agctgcctcagcggtcgcat 792
to top
>gb|AY009938.2| Hordeum vulgare subsp. vulgare MLA1-2 (Mla1-2) gene, partial cds; and
            MLA1 (Mla1) gene, complete cds
          Length = 18958

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 24   atatatttcatactttatta 43
            ||||||||||||||||||||
Sbjct: 6352 atatatttcatactttatta 6371
to top
>emb|BX005258.11| Zebrafish DNA sequence from clone DKEY-77I24 in linkage group 17,
              complete sequence
          Length = 193078

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 74     aattttgaaccctacaatatagtt 97
              |||||||||||||||||| |||||
Sbjct: 114656 aattttgaaccctacaatgtagtt 114679
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 259      catcccaagttcccaaccca 278
                ||||||||||||||||||||
Sbjct: 21728956 catcccaagttcccaaccca 21728937
to top
>gb|AC153605.2| Mus musculus 6 BAC RP23-346H23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 229744

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     atatttcatactttattatt 45
              ||||||||||||||||||||
Sbjct: 129452 atatttcatactttattatt 129471
to top
>dbj|D86600.2| Loligo bleekeri mRNA for voltage-dependent calcium channel, complete
            cds
          Length = 7113

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 30   ttcatactttattattttgg 49
            ||||||||||||||||||||
Sbjct: 2386 ttcatactttattattttgg 2405


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,750,660
Number of Sequences: 3902068
Number of extensions: 2750660
Number of successful extensions: 46918
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46644
Number of HSP's gapped (non-prelim): 267
length of query: 413
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 391
effective length of database: 17,147,199,772
effective search space: 6704555110852
effective search space used: 6704555110852
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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