>M2OM_MOUSE (Q9CR62) Mitochondrial 2-oxoglutarate/malate carrier protein (OGCP)|
           (Solute carrier family 25 member 11)
          Length = 313

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
 Frame = +1

Query: 127 KLKRDDGIQGMQKGCIITISLA-----GYYATYSGNSTSWLRTGSISSSFGCHM*AS 282
           ++ R++G+  + +GCI T++ A        A+YS +    L +G  S +  CH  AS
Sbjct: 169 RIAREEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCAS 225

>GUX1_HUMGT (P15828) Exoglucanase 1 precursor (EC 3.2.1.91) (Exoglucanase I)|
           (Exocellobiohydrolase I) (1,4-beta-cellobiohydrolase)
           (Beta-glucancellobiohydrolase)
          Length = 525

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 292 TIDVMLTYDSRRRRRSTPSGATMCYFQNKW 203
           T+   +T DS  R     SG+T CY  NKW
Sbjct: 45  TVQASITLDSNWRWTHQVSGSTNCYTGNKW 74

>M2OM_HUMAN (Q02978) Mitochondrial 2-oxoglutarate/malate carrier protein (OGCP)|
           (Solute carrier family 25 member 11)
          Length = 313

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
 Frame = +1

Query: 127 KLKRDDGIQGMQKGCIITISLA-----GYYATYSGNSTSWLRTGSISSSFGCHM*AS 282
           ++ R++G+  + +GCI T++ A        A+YS +    L +G  S +  CH  AS
Sbjct: 169 RITREEGVLTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCAS 225

>POLG_HCVJA (P26662) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3009

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -2

Query: 197 YPASEIVMMHPFCIPCIPSSLFS 129
           Y A++++M  P C+PC+  S FS
Sbjct: 213 YEAADMIMHTPGCVPCVRESNFS 235

>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive|
           photomorphogenesis protein 1)
          Length = 672

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
 Frame = +2

Query: 14  HVYIHERTTES---CAQMNAY---QHANDNYKVVIIIMGAWNKRN*KGMMEYKECKKDAS 175
           H  + E TT S   C   N Y   Q A+ +Y+ ++ +   W     K +MEY+E +K A 
Sbjct: 408 HCPVVEMTTRSKLSCLSWNKYAKNQIASSDYEGIVTV---WTMTTRKSLMEYEEHEKRAW 464

Query: 176 SL 181
           S+
Sbjct: 465 SV 466

>RPM1_CAEEL (Q17551) Ubiquitin ligase protein rpm-1 (EC 6.3.2.-)|
            (Pam/highwire/rpm-1 protein) (Regulator of presynaptic
            morphology protein 1) (Synapse defective protein 3)
          Length = 3766

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 187  LAGYYATYSGNSTSWLRTGSISSSFGCHM*ASH 285
            L+G+ +T +G    WL TGS+  +  C +  SH
Sbjct: 1963 LSGHTSTSAGFLAKWLPTGSVVDASKCQLSLSH 1995

>GUX1_NEUCR (P38676) Exoglucanase 1 precursor (EC 3.2.1.91)|
           (Exocellobiohydrolase 1) (1,4-beta-cellobiohydrolase)
          Length = 516

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 292 TIDVMLTYDSRRRRRSTPSGATMCYFQNKWHS 197
           T++  +  D+  R     SG+T CY  NKW +
Sbjct: 43  TLNTTMVLDANWRWTHATSGSTKCYTGNKWQA 74

>M2OM_BOVIN (P22292) Mitochondrial 2-oxoglutarate/malate carrier protein (OGCP)|
           (Solute carrier family 25 member 11)
          Length = 313

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
 Frame = +1

Query: 127 KLKRDDGIQGMQKGCIITISLA-----GYYATYSGNSTSWLRTGSISSSFGCHM*AS 282
           ++ +++G+  + +GCI T++ A        A+YS +    L +G  S +  CH  AS
Sbjct: 169 RIVQEEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCAS 225

>CRUM1_HUMAN (P82279) Crumbs homolog 1 precursor|
          Length = 1406

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 142  DGIQGMQKGCIITISLAGYYATYSGN 219
            D I+G+Q GC+ TI + G Y +Y  N
Sbjct: 1088 DNIKGLQ-GCLSTIEIGGIYLSYFEN 1112

>YNES_BACSU (Q45064) UPF0078 membrane protein yneS|
          Length = 193

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -1

Query: 126 LLFHAPMMIITTL*LSFACWYAFICAHDSVVLSCMYT*SYSF 1
           LLF+AP++ IT + + F   Y       S +L+ +YT  YSF
Sbjct: 112 LLFYAPLLFITMVAVFFIFLYLTKFVSLSSMLTGIYTVIYSF 153


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,619,339
Number of Sequences: 219361
Number of extensions: 800302
Number of successful extensions: 1740
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1740
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)