>emb|X57408.1|TAPSB0 Wheat PsbO mRNA for 33kDa oxygen evolving protein of photosystem II
          Length = 1217

 Score = 91.7 bits (46), Expect = 3e-16
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                        
Query: 11   acattcatgggggatcaatatcatgagctggtgagcaagaaatgataacagaagctaaaa 70
            |||||||||||||||||||||||||||  || ||| ||||||  ||||||||||||||||
Sbjct: 1200 acattcatgggggatcaatatcatgagtaggcgaggaagaaacaataacagaagctaaaa 1141

                      
Query: 71   tataaaccga 80
            ||||||||||
Sbjct: 1140 tataaaccga 1131

>emb|CR513786.5| Zebrafish DNA sequence from clone CH211-92F19 in linkage group 14,
             complete sequence
          Length = 97391

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 57    aacagaagctaaaatataaac 77
             |||||||||||||||||||||
Sbjct: 73732 aacagaagctaaaatataaac 73752

>gb|AC026785.4| Homo sapiens chromosome 5 clone CTD-2139B15, complete sequence
          Length = 152010

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 36    agctggtgagcaagaaatgat 56
             |||||||||||||||||||||
Sbjct: 64103 agctggtgagcaagaaatgat 64083

>gb|AC023175.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-69B14, complete
              sequence
          Length = 195667

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     agctggtgagcaagaaatga 55
              ||||||||||||||||||||
Sbjct: 166557 agctggtgagcaagaaatga 166576

>emb|AL353810.9| Human DNA sequence from clone RP11-261H15 on chromosome 9, complete
             sequence
          Length = 111330

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     tgaacatacacattcatggg 21
             ||||||||||||||||||||
Sbjct: 63948 tgaacatacacattcatggg 63967

>emb|CR354557.9| Zebrafish DNA sequence from clone DKEY-34I7 in linkage group 23,
             complete sequence
          Length = 127420

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    aacagaagctaaaatataaa 76
             ||||||||||||||||||||
Sbjct: 79443 aacagaagctaaaatataaa 79462

>gb|AC008045.5|AC008045 Homo sapiens chromosome 14q31 clone CTD-2552H2 containing neurexin III
             gene, partial cds, complete sequence
          Length = 188078

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     gaacatacacattcatgggg 22
             ||||||||||||||||||||
Sbjct: 30584 gaacatacacattcatgggg 30603

>emb|BX001012.6| Zebrafish DNA sequence from clone CH211-11C20 in linkage group 4,
             complete sequence
          Length = 158481

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    aacagaagctaaaatataaa 76
             ||||||||||||||||||||
Sbjct: 41290 aacagaagctaaaatataaa 41271

>gb|AF147744.1|AF147744 Staphylococcus aureus strain C55 lantibiotic structural protein
           alpha, lantibiotic structural protein beta, lantibiotic
           modifying enzyme, and transporter genes, complete cds
          Length = 6276

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 56  taacagaagctaaaatataa 75
           ||||||||||||||||||||
Sbjct: 168 taacagaagctaaaatataa 187

>dbj|AP003088.1| Staphylococcus aureus TY4, ETB plasmid DNA, complete sequence
          Length = 38211

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    taacagaagctaaaatataa 75
             ||||||||||||||||||||
Sbjct: 24370 taacagaagctaaaatataa 24389

>emb|CR457459.9| Zebrafish DNA sequence from clone DKEY-25P11 in linkage group 12,
              complete sequence
          Length = 206901

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 52     atgataacagaagctaaaatata 74
              |||||||||||||||| ||||||
Sbjct: 199185 atgataacagaagctataatata 199163

>ref|XM_388026.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07850.1)
            partial mRNA
          Length = 6270

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 21   gggatcaatatcatgagct 39
            |||||||||||||||||||
Sbjct: 5371 gggatcaatatcatgagct 5389

>gb|AC098587.5| Homo sapiens BAC clone RP11-231C18 from 4, complete sequence
          Length = 132164

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     gtgaacatacacattcatg 19
             |||||||||||||||||||
Sbjct: 31061 gtgaacatacacattcatg 31043

>gb|AC005998.3| Homo sapiens PAC clone RP4-622E21 from 7, complete sequence
          Length = 96556

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 57    aacagaagctaaaatataa 75
             |||||||||||||||||||
Sbjct: 55606 aacagaagctaaaatataa 55588

>gb|AC006008.2| Homo sapiens PAC clone RP5-820A21 from 7, complete sequence
          Length = 57554

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    aacagaagctaaaatataa 75
             |||||||||||||||||||
Sbjct: 21953 aacagaagctaaaatataa 21971

>gb|AF495543.1|AF495543S1 Homo sapiens translation initiation factor 2 (MTIF2) gene, exons 1
            through 5; nuclear genes for mitochondrial products
          Length = 8550

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 47   aagaaatgataacagaagc 65
            |||||||||||||||||||
Sbjct: 3381 aagaaatgataacagaagc 3363

>emb|AL161791.15| Human DNA sequence from clone RP11-82L2 on chromosome 9 Contains the 5'
             end of the SMC2L1 gene for SMC2 structural maintenance of
             chromosomes 2-like 1 (yeast) (CAPE, CAP-E, hCAP-E) and a
             CpG island, complete sequence
          Length = 108821

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 58    acagaagctaaaatataaa 76
             |||||||||||||||||||
Sbjct: 83177 acagaagctaaaatataaa 83195

>emb|BX572093.1| Prochlorococcus marinus MED4 complete genome; segment 4/5
          Length = 348986

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 53    tgataacagaagctaaaat 71
             |||||||||||||||||||
Sbjct: 97927 tgataacagaagctaaaat 97909

>gb|AC026789.5| Homo sapiens chromosome 5 clone CTD-2219P2, complete sequence
          Length = 176072

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 1      gtgaacatacacattcatg 19
              |||||||||||||||||||
Sbjct: 145169 gtgaacatacacattcatg 145187

>gb|AC026727.6| Homo sapiens chromosome 5 clone CTD-2258D6, complete sequence
          Length = 176072

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 1      gtgaacatacacattcatg 19
              |||||||||||||||||||
Sbjct: 145169 gtgaacatacacattcatg 145187

>gb|AC103693.2| Homo sapiens chromosome 18, clone CTD-2522C24, complete sequence
          Length = 193404

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 58     acagaagctaaaatataaa 76
              |||||||||||||||||||
Sbjct: 112342 acagaagctaaaatataaa 112360

>gb|AC008549.6|AC008549 Homo sapiens chromosome 5 clone CTC-505O3, complete sequence
          Length = 205342

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     gtgaacatacacattcatg 19
             |||||||||||||||||||
Sbjct: 90981 gtgaacatacacattcatg 90999

>gb|AC024706.6| Homo sapiens BAC clone RP11-119J20 from 4, complete sequence
          Length = 169557

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 1      gtgaacatacacattcatg 19
              |||||||||||||||||||
Sbjct: 154273 gtgaacatacacattcatg 154291

>gb|AC007131.4| Homo sapiens BAC clone RP11-179A20 from 2, complete sequence
          Length = 160087

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 74    aaaccgatcactctggttt 92
             |||||||||||||||||||
Sbjct: 69178 aaaccgatcactctggttt 69160

>gb|AC138606.1| Homo sapiens BAC clone RP11-702J23 from 4, complete sequence
          Length = 15567

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 48   agaaatgataacagaagct 66
            |||||||||||||||||||
Sbjct: 4088 agaaatgataacagaagct 4070

>gb|AC083798.14| Homo sapiens 3q BAC RP11-299J3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 145605

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 1      gtgaacatacacattcatg 19
              |||||||||||||||||||
Sbjct: 114401 gtgaacatacacattcatg 114419


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,181,053
Number of Sequences: 3902068
Number of extensions: 1181053
Number of successful extensions: 85882
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85831
Number of HSP's gapped (non-prelim): 51
length of query: 98
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 77
effective length of database: 17,151,101,840
effective search space: 1320634841680
effective search space used: 1320634841680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)