| Clone Name | rbaet27a08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_466744.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1574 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1339 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1298
>ref|XM_466743.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1371 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1136 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1095
>ref|XM_507509.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1586 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1351 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1310
>ref|XM_507508.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1631 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1352 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1311
>ref|XM_507507.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>ref|XM_507506.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>ref|XM_507505.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>ref|XM_507504.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>ref|XM_507503.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>ref|XM_507502.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>ref|XM_507501.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>ref|XM_507500.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>ref|XM_507499.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>ref|XM_507498.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1592 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>ref|XM_507497.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1624 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>ref|XM_506867.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1590 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1358 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1317
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 24393555 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 24393514
>dbj|AP004097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1792_D02 Length = 141649 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 21761 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 21720
>dbj|AK105020.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-A05, full insert sequence Length = 1329 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1094 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1053
>dbj|AK119668.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-H04, full insert sequence Length = 1631 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1352 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1311
>dbj|AK106124.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F02, full insert sequence Length = 1586 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1351 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1310
>dbj|AK106204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-F12, full insert sequence Length = 1589 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>dbj|AK104569.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G04, full insert sequence Length = 1589 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>dbj|AK104563.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D08, full insert sequence Length = 1589 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>dbj|AK104662.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-E08, full insert sequence Length = 1589 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>dbj|AK104643.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G04, full insert sequence Length = 975 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 740 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 699
>dbj|AK104632.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-C05, full insert sequence Length = 1624 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>dbj|AK104607.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B08, full insert sequence Length = 1016 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 757 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 716
>dbj|AK104455.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A09, full insert sequence Length = 1589 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>dbj|AK104383.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-C11, full insert sequence Length = 1589 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>dbj|AK104310.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H06, full insert sequence Length = 1589 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>dbj|AK104307.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-E07, full insert sequence Length = 1589 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>dbj|AK104284.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-A03, full insert sequence Length = 1574 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1339 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1298
>dbj|AK103939.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G07, full insert sequence Length = 1589 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1313
>dbj|AK064829.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F09, full insert sequence Length = 1591 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1359 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1318
>dbj|AK061687.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B02, full insert sequence Length = 1323 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1088 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1047
>dbj|AK060972.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D12, full insert sequence Length = 1371 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 1136 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 1095
>dbj|AK059998.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G05, full insert sequence Length = 1043 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 766 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagt 725
>gb|AY110727.1| Zea mays CL18204_1 mRNA sequence Length = 1134 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||||||||| || |||||||||||||||||| |||||| Sbjct: 727 ctcactcatgcagtgtagcgtacgtcacatagctgaagtagt 768
>gb|AY107303.1| Zea mays PCO142509 mRNA sequence Length = 946 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagta 240 |||| ||||||||||| ||||||||||| ||||||||||| Sbjct: 699 ctcagtcatgcagagtagcgtacgtcacgtagctggagta 660
>dbj|AK109334.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B09, full insert sequence Length = 1589 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 201 ctcactcatgcagagtggcgtacgtcacatagctggagtagt 242 ||||||| ||||| ||||||||| |||| ||||||||||||| Sbjct: 1354 ctcactcgtgcagggtggcgtacatcacgtagctggagtagt 1313
>ref|NM_028719.1| Mus musculus copine IV (Cpne4), mRNA Length = 3670 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aaacatgcaaaatacagtcca 23 ||||||||||||||||||||| Sbjct: 2440 aaacatgcaaaatacagtcca 2420
>ref|XM_615230.2| PREDICTED: Bos taurus similar to copine IV, transcript variant 1 (LOC535211), mRNA Length = 1158 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aaacatgcaaaatacagtcca 23 ||||||||||||||||||||| Sbjct: 1144 aaacatgcaaaatacagtcca 1124
>ref|XM_872946.1| PREDICTED: Bos taurus similar to copine IV, transcript variant 2 (LOC535211), mRNA Length = 1212 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aaacatgcaaaatacagtcca 23 ||||||||||||||||||||| Sbjct: 1198 aaacatgcaaaatacagtcca 1178
>gb|BC014396.1| Homo sapiens copine IV, mRNA (cDNA clone MGC:15604 IMAGE:3162811), complete cds Length = 2587 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aaacatgcaaaatacagtcca 23 ||||||||||||||||||||| Sbjct: 2564 aaacatgcaaaatacagtcca 2544
>ref|NM_130808.1| Homo sapiens copine IV (CPNE4), mRNA Length = 2587 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aaacatgcaaaatacagtcca 23 ||||||||||||||||||||| Sbjct: 2564 aaacatgcaaaatacagtcca 2544
>ref|XM_542781.2| PREDICTED: Canis familiaris similar to copine IV (LOC485661), mRNA Length = 2244 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aaacatgcaaaatacagtcca 23 ||||||||||||||||||||| Sbjct: 2226 aaacatgcaaaatacagtcca 2206
>gb|AC117688.10| Mus musculus chromosome 9, clone RP23-444I6, complete sequence Length = 227272 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 aaacatgcaaaatacagtcca 23 ||||||||||||||||||||| Sbjct: 53132 aaacatgcaaaatacagtcca 53152
>gb|BC028613.1| Homo sapiens copine IV, mRNA (cDNA clone IMAGE:4814409), complete cds Length = 2316 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aaacatgcaaaatacagtcca 23 ||||||||||||||||||||| Sbjct: 1131 aaacatgcaaaatacagtcca 1111
>gb|AY040819.1| Galleria mellonella trypsin-like protein mRNA, complete cds Length = 993 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 caagagcaaataccgacgacg 167 ||||||||||||||||||||| Sbjct: 700 caagagcaaataccgacgacg 680
>dbj|AK128117.1| Homo sapiens cDNA FLJ46238 fis, clone TESTI4017382, moderately similar to Copine VII Length = 4277 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aaacatgcaaaatacagtcca 23 ||||||||||||||||||||| Sbjct: 4256 aaacatgcaaaatacagtcca 4236
>emb|CR617237.1| full-length cDNA clone CS0DF015YF17 of Fetal brain of Homo sapiens (human) Length = 1958 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aaacatgcaaaatacagtcca 23 ||||||||||||||||||||| Sbjct: 1955 aaacatgcaaaatacagtcca 1935
>dbj|AK056175.1| Homo sapiens cDNA FLJ31613 fis, clone NT2RI2002958, moderately similar to Homo sapiens mRNA for copine VI protein Length = 2478 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aaacatgcaaaatacagtcca 23 ||||||||||||||||||||| Sbjct: 2478 aaacatgcaaaatacagtcca 2458
>emb|CR593567.1| full-length cDNA clone CS0DF012YO10 of Fetal brain of Homo sapiens (human) Length = 2432 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aaacatgcaaaatacagtcca 23 ||||||||||||||||||||| Sbjct: 1257 aaacatgcaaaatacagtcca 1237
>gb|AC096747.3| Homo sapiens BAC clone RP11-396I22 from 4, complete sequence Length = 206789 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 acaaggaaaacaaaaagcaat 125 ||||||||||||||||||||| Sbjct: 170719 acaaggaaaacaaaaagcaat 170739
>dbj|AK014396.1| Mus musculus adult male brain cDNA, RIKEN full-length enriched library, clone:3632411M23 product:weakly similar to COPINE VII [Homo sapiens], full insert sequence Length = 3409 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aaacatgcaaaatacagtcca 23 ||||||||||||||||||||| Sbjct: 2196 aaacatgcaaaatacagtcca 2176
>gb|AC107027.9| Homo sapiens 3 BAC RP11-517B11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171562 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aaacatgcaaaatacagtcca 23 ||||||||||||||||||||| Sbjct: 48375 aaacatgcaaaatacagtcca 48355
>gb|BC063081.1| Mus musculus copine IV, mRNA (cDNA clone MGC:69723 IMAGE:6417611), complete cds Length = 3670 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aaacatgcaaaatacagtcca 23 ||||||||||||||||||||| Sbjct: 2440 aaacatgcaaaatacagtcca 2420
>gb|BC043087.1| Mus musculus copine IV, mRNA (cDNA clone MGC:58003 IMAGE:6417611), complete cds Length = 3670 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aaacatgcaaaatacagtcca 23 ||||||||||||||||||||| Sbjct: 2440 aaacatgcaaaatacagtcca 2420
>emb|AL807247.10| Mouse DNA sequence from clone RP23-178D3 on chromosome 4, complete sequence Length = 184686 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 aggaaaacaaaaagcaatcac 128 ||||||||||||||||||||| Sbjct: 62011 aggaaaacaaaaagcaatcac 62031
>gb|AC124427.5| Mus musculus BAC clone RP24-232N5 from chromosome 8, complete sequence Length = 205525 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 tgggcatgtcattcccactg 187 |||||||||||||||||||| Sbjct: 155571 tgggcatgtcattcccactg 155590
>gb|AC146687.1| Mus musculus BAC clone RP24-487N17 from chromosome Y, complete sequence Length = 162474 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 95786 atgcaaaatacagttcaaatttaa 95763 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 36870 atgcaaaatacagttcaaatttaa 36847
>gb|AC147625.3| Mus musculus BAC clone RP24-348P17 from chromosome Y, complete sequence Length = 176911 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 44855 atgcaaaatacagttcaaatttaa 44878
>gb|AC147105.2| Mus musculus BAC clone RP24-66E5 from chromosome Y, complete sequence Length = 223344 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 132632 atgcaaaatacagttcaaatttaa 132655 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 70332 atgcaaaatacagttcaaatttaa 70355
>gb|AC145742.3| Mus musculus BAC clone RP24-225F21 from chromosome Y, complete sequence Length = 183572 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 180546 atgcaaaatacagttcaaatttaa 180569
>gb|AC127680.3| Mus musculus BAC clone RP24-159F1 from chromosome X, complete sequence Length = 199848 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 171311 atgcaaaatacagtccaactttaa 171334
>gb|AC146597.3| Mus musculus BAC clone RP24-230I13 from chromosome Y, complete sequence Length = 181426 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 81076 atgcaaaatacagttcaaatttaa 81099 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 18531 atgcaaaatacagttcaaatttaa 18554
>gb|AC175673.2| Mus musculus BAC clone RP24-26I10 from chromosome y, complete sequence Length = 203739 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 158278 atgcaaaatacagttcaaatttaa 158301
>gb|AC183662.2| Mus musculus BAC clone RP24-452J21 from chromosome y, complete sequence Length = 157980 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 85454 atgcaaaatacagttcaaatttaa 85431 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 23332 atgcaaaatacagttcaaatttaa 23309
>gb|AY663415.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA03715 MHC class II antigen (HLA-DQB1) gene, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*0103 allele, and MHC class II antigen (HLA-DRB1) gene, complete cds Length = 100761 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 gtagcagcacaatacgtaca 72 |||||||||||||||||||| Sbjct: 94429 gtagcagcacaatacgtaca 94448
>gb|AY663413.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA14663 MHC class II antigen (HLA-DQB1) gene, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*010201 allele, and MHC class II antigen (HLA-DRB1) gene, complete cds Length = 117527 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 gtagcagcacaatacgtaca 72 |||||||||||||||||||| Sbjct: 111189 gtagcagcacaatacgtaca 111208
>gb|AY663412.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA00576 MHC class II antigen (HLA-DQB1) gene, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*0505 allele, and MHC class II antigen (HLA-DRB1) gene, HLA-DRB1-DRB1*110101 allele, complete cds Length = 108785 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 gtagcagcacaatacgtaca 72 |||||||||||||||||||| Sbjct: 84315 gtagcagcacaatacgtaca 84334
>gb|AY663408.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA04535 MHC class II antigen (HLA-DQB1) gene, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*010401 allele, and MHC class II antigen (HLA-DRB1) gene, HLA-DRB1-DRB1*140501 allele, complete cds Length = 100515 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 gtagcagcacaatacgtaca 72 |||||||||||||||||||| Sbjct: 89359 gtagcagcacaatacgtaca 89378
>gb|AY663405.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA10540 MHC class II antigen (HLA-DQB1) gene, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*010401 allele, and MHC class II antigen (HLA-DRB1) gene, complete cds Length = 116082 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 gtagcagcacaatacgtaca 72 |||||||||||||||||||| Sbjct: 91683 gtagcagcacaatacgtaca 91702
>gb|AY663402.1| Gorilla gorilla voucher Coriell Cell Repository DNA sample NG05251 MHC class II antigen (HLA-DRB1) gene, complete cds Length = 54488 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 gtagcagcacaatacgtaca 72 |||||||||||||||||||| Sbjct: 50733 gtagcagcacaatacgtaca 50752
>gb|AY663397.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA01960 MHC class II antigen (HLA-DQB1), MHC class II antigen (HLA-DQA1), and MHC class II antigen (HLA-DRB1) genes, complete cds Length = 94591 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 gtagcagcacaatacgtaca 72 |||||||||||||||||||| Sbjct: 84520 gtagcagcacaatacgtaca 84539
>gb|AY663394.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA14661 MHC class II antigen (HLA-DQB1) gene, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*0505 allele, and MHC class II antigen (HLA-DRB1) gene, HLA-DRB1-DRB1*110401 allele, complete cds Length = 127159 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 gtagcagcacaatacgtaca 72 |||||||||||||||||||| Sbjct: 103780 gtagcagcacaatacgtaca 103799
>gb|AC182456.2| Mus musculus BAC clone RP24-65H21 from chromosome y, complete sequence Length = 194102 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 78287 atgcaaaatacagttcaaatttaa 78310 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 16035 atgcaaaatacagttcaaatttaa 16058
>gb|AC140382.3| Mus musculus BAC clone RP24-86A10 from chromosome Y, complete sequence Length = 193056 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 138467 atgcaaaatacagttcaaatttaa 138490 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 79554 atgcaaaatacagttcaaatttaa 79577
>gb|AC147709.1| Mus musculus BAC clone RP24-97E15 from chromosome Y, complete sequence Length = 197983 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 143146 atgcaaaatacagttcaaatttaa 143169 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 84217 atgcaaaatacagttcaaatttaa 84240
>gb|AC143328.4| Mus musculus BAC clone RP24-119E16 from chromosome Y, complete sequence Length = 163625 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 134757 atgcaaaatacagttcaaatttaa 134780
>gb|AC144646.3| Mus musculus BAC clone RP24-388P5 from chromosome Y, complete sequence Length = 151248 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 34825 atgcaaaatacagttcaaatttaa 34848
>emb|CR956627.17| Mouse DNA sequence from clone RP24-402N1 on chromosome X, complete sequence Length = 155119 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 31461 atgcaaaatacagtccaactttaa 31438
>emb|CR974459.7| Mouse DNA sequence from clone RP23-179P23 on chromosome X, complete sequence Length = 226435 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 137029 atgcaaaatacagtccaactttaa 137006 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 16838 atgcaaaatacagtccaactttaa 16815
>gb|AC127580.3| Mus musculus BAC clone RP23-447P16 from chromosome 12, complete sequence Length = 175727 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 acagccacacgtacaaggaaaaca 116 |||||||||| ||||||||||||| Sbjct: 142182 acagccacacatacaaggaaaaca 142159
>gb|AC127688.7| Mus musculus BAC clone RP24-200F13 from chromosome X, complete sequence Length = 162832 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 42958 atgcaaaatacagtccaactttaa 42981
>gb|AC122023.3| Mus musculus BAC clone RP24-372O13 from 12, complete sequence Length = 179947 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 acagccacacgtacaaggaaaaca 116 |||||||||| ||||||||||||| Sbjct: 2749 acagccacacatacaaggaaaaca 2726
>gb|AC151532.3| Mus musculus BAC clone RP24-279A12 from chromosome y, complete sequence Length = 158231 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 98967 atgcaaaatacagttcaaatttaa 98944 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 36925 atgcaaaatacagttcaaatttaa 36902
>gb|AC121236.18| Medicago truncatula clone mth2-12m19, complete sequence Length = 124839 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 caaatacaagagcaaatacc 160 |||||||||||||||||||| Sbjct: 95110 caaatacaagagcaaatacc 95091
>gb|AC151964.12| Medicago truncatula clone mth2-47g17, complete sequence Length = 117929 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 caaatacaagagcaaatacc 160 |||||||||||||||||||| Sbjct: 58176 caaatacaagagcaaatacc 58157
>gb|AC175492.4| Mus musculus BAC clone RP24-76P21 from chromosome y, complete sequence Length = 203854 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 159474 atgcaaaatacagttcaaatttaa 159497 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 89173 atgcaaaatacagttcaaatttaa 89196
>gb|AC175493.3| Mus musculus BAC clone RP24-70B12 from chromosome y, complete sequence Length = 206261 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 140467 atgcaaaatacagttcaaatttaa 140444
>emb|AL356534.12| Human DNA sequence from clone RP11-629P13 on chromosome 6, complete sequence Length = 175757 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 gaaaacaaaaagcaatcacgtgta 133 |||||||||||||||||| ||||| Sbjct: 48854 gaaaacaaaaagcaatcaagtgta 48831
>emb|AL132873.9|HSJ592G19 Human DNA sequence from clone RP4-592G19 on chromosome 20 Contains STSs and GSSs, complete sequence Length = 13413 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aacatgcaaaatacagtcca 23 |||||||||||||||||||| Sbjct: 12519 aacatgcaaaatacagtcca 12538
>emb|CR628363.12| Mouse DNA sequence from clone RP23-329B21 on chromosome X, complete sequence Length = 196122 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 139895 atgcaaaatacagtccaactttaa 139872 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 22104 atgcaaaatacagtccaactttaa 22081
>emb|BX005206.15| Mouse DNA sequence from clone RP23-384P3 on chromosome X, complete sequence Length = 202812 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 186965 atgcaaaatacagtccaactttaa 186942 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 66768 atgcaaaatacagtccaactttaa 66745
>emb|CR556702.10| Mouse DNA sequence from clone RP24-370F24 on chromosome X, complete sequence Length = 148966 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 72315 atgcaaaatacagtccaactttaa 72292
>emb|BX571788.8| Mouse DNA sequence from clone RP23-30M5 on chromosome X, complete sequence Length = 233695 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 117862 atgcaaaatacagtccaactttaa 117839
>emb|BX649235.2| Mouse DNA sequence from clone RP24-85D2 on chromosome X, complete sequence Length = 133621 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 96019 atgcaaaatacagtccaactttaa 96042 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 4342 atgcaaaatacagtccaactttaa 4365
>emb|BX679668.12| Mouse DNA sequence from clone RP23-83P7 on chromosome X, complete sequence Length = 121586 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 101461 atgcaaaatacagtccaactttaa 101484
>emb|CR381683.9| Mouse DNA sequence from clone RP24-559I10 on chromosome X, complete sequence Length = 150276 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 116169 atgcaaaatacagtccaactttaa 116192
>emb|BX088531.8| Mouse DNA sequence from clone RP23-106J7 on chromosome X, complete sequence Length = 208905 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 87404 atgcaaaatacagtccaactttaa 87427
>gb|AC182453.2| Mus musculus BAC clone RP24-220F23 from chromosome y, complete sequence Length = 138354 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 93347 atgcaaaatacagttcaaatttaa 93370
>gb|AC163279.6| Mus musculus BAC clone RP24-112D16 from chromosome y, complete sequence Length = 198421 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 94587 atgcaaaatacagttcaaatttaa 94564 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 32544 atgcaaaatacagttcaaatttaa 32521
>gb|AC175393.3| Mus musculus BAC clone RP24-37L23 from chromosome y, complete sequence Length = 177185 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 165607 atgcaaaatacagttcaaatttaa 165630 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 103806 atgcaaaatacagttcaaatttaa 103829
>gb|AC175663.3| Mus musculus BAC clone RP24-430F7 from chromosome y, complete sequence Length = 144867 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 106906 atgcaaaatacagttcaaatttaa 106883 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 44744 atgcaaaatacagttcaaatttaa 44721
>emb|BX005197.11| Mouse DNA sequence from clone RP23-216H19 on chromosome X, complete sequence Length = 179460 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 8570 atgcaaaatacagtccaactttaa 8593
>emb|BX571804.4| Mouse DNA sequence from clone RP23-133K13 on chromosome X, complete sequence Length = 101631 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 18250 atgcaaaatacagtccaactttaa 18273
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 cacacgtacaaggaaaacaaaaag 121 |||||||| ||||||||||||||| Sbjct: 11848256 cacacgtaaaaggaaaacaaaaag 11848233
>emb|AJ627213.1| Gallus gallus primary C-C chemokine receptor cluster Length = 210954 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 caaggaaaacaaaaagcaat 125 |||||||||||||||||||| Sbjct: 108734 caaggaaaacaaaaagcaat 108715
>gb|AC127261.3| Mus musculus BAC clone RP24-316F4 from chromosome unknown, complete sequence Length = 168193 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 150306 atgcaaaatacagttcaaatttaa 150283
>emb|BX842674.4| Mouse DNA sequence from clone RP24-212K8 on chromosome X, complete sequence Length = 50448 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 34948 atgcaaaatacagtccaactttaa 34925
>gb|AC129774.4| Mus musculus BAC clone RP24-167G16 from chromosome y, complete sequence Length = 168396 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 102668 atgcaaaatacagttcaaatttaa 102645 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 40566 atgcaaaatacagttcaaatttaa 40543
>dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1012D10 Length = 168267 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 cacacgtacaaggaaaacaaaaag 121 |||||||| ||||||||||||||| Sbjct: 60541 cacacgtaaaaggaaaacaaaaag 60518
>emb|BX005468.9| Mouse DNA sequence from clone RP23-142E21 on chromosome X, complete sequence Length = 217179 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 108203 atgcaaaatacagtccaactttaa 108226 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 12004 atgcaaaatacagtccaactttaa 12027
>emb|BX119993.9| Mouse DNA sequence from clone RP23-13I18 on chromosome X, complete sequence Length = 234697 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 107860 atgcaaaatacagtccaactttaa 107837
>gb|AC131186.5| Mus musculus BAC clone RP24-150P7 from Y, complete sequence Length = 150330 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 22642 atgcaaaatacagttcaaatttaa 22619
>gb|AC147630.4| Mus musculus BAC clone RP24-530L22 from Y, complete sequence Length = 180127 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 76126 atgcaaaatacagttcaaatttaa 76149 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||| ||||||||| Sbjct: 14326 atgcaaaatacagttcaaatttaa 14349
>emb|CR974488.16| Mouse DNA sequence from clone RP23-124J3 on chromosome X, complete sequence Length = 86599 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 16986 atgcaaaatacagtccaactttaa 16963
>emb|CR974480.18| Mouse DNA sequence from clone RP23-239B4 on chromosome X, complete sequence Length = 103306 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 atgcaaaatacagtccaaatttaa 30 |||||||||||||||||| ||||| Sbjct: 18980 atgcaaaatacagtccaactttaa 18957 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,563,971 Number of Sequences: 3902068 Number of extensions: 2563971 Number of successful extensions: 59258 Number of sequences better than 10.0: 120 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 58945 Number of HSP's gapped (non-prelim): 313 length of query: 278 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 256 effective length of database: 17,147,199,772 effective search space: 4389683141632 effective search space used: 4389683141632 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)