>gb|AY108343.1| Zea mays PCO065510 mRNA sequence
          Length = 1496

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 49/49 (100%)
 Strand = Plus / Plus

                                                            
Query: 367 aggcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggct 415
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aggcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggct 417

>ref|XM_470547.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1788

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 369  gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggct 415
            |||| |||||| ||||||||||| |||| |||||||||||| |||||
Sbjct: 1784 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggct 1738

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                              
Query: 369     gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggct 415
               |||| |||||| ||||||||||| |||| |||||||||||| |||||
Sbjct: 4253220 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggct 4253174

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                              
Query: 369     gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggct 415
               |||| |||||| ||||||||||| |||| |||||||||||| |||||
Sbjct: 4253335 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggct 4253289

>dbj|AK119228.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-A08, full
            insert sequence
          Length = 1912

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 369  gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggct 415
            |||| |||||| ||||||||||| |||| |||||||||||| |||||
Sbjct: 1679 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggct 1633

>dbj|AK100798.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121F20, full
           insert sequence
          Length = 662

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 369 gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggct 415
           |||| |||||| ||||||||||| |||| |||||||||||| |||||
Sbjct: 429 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggct 383

>dbj|AK099232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094M20, full
            insert sequence
          Length = 1903

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 369  gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggct 415
            |||| |||||| ||||||||||| |||| |||||||||||| |||||
Sbjct: 1670 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggct 1624

>dbj|AK061335.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-B10, full
            insert sequence
          Length = 1909

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 369  gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggct 415
            |||| |||||| ||||||||||| |||| |||||||||||| |||||
Sbjct: 1679 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggct 1633

>dbj|AK060840.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D04, full
            insert sequence
          Length = 1907

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 369  gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggct 415
            |||| |||||| ||||||||||| |||| |||||||||||| |||||
Sbjct: 1674 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggct 1628

>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0076N15, complete sequence
          Length = 134307

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 369   gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggct 415
             |||| |||||| ||||||||||| |||| |||||||||||| |||||
Sbjct: 81835 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggct 81789

>emb|CT476825.1| S.lycopersicum DNA sequence from clone LE_HBa-198L24 on chromosome 4,
             complete sequence
          Length = 160432

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 20    caacttatataattataaagtct 42
             |||||||||||||||||||||||
Sbjct: 98740 caacttatataattataaagtct 98762

>emb|AL109756.9|HSDJ617C6 Human DNA sequence from clone RP4-617C6 on chromosome 1p13.3-22.1
             Contains a novel gene, complete sequence
          Length = 111491

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 56    aaagtccaaagtaatgaaatt 76
             |||||||||||||||||||||
Sbjct: 92800 aaagtccaaagtaatgaaatt 92820

>emb|AL079334.7|HSJ300O13 Human DNA sequence from clone RP1-300O13 on chromosome Xq22.1-24
            Contains part of the AMMECR1 gene for Alport syndrome
            (mental retardation, midface hypoplasia and
            elliptocytosis, chromosomal region gene 1) (FLJ341111),
            complete sequence
          Length = 63660

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 56   aaagtccaaagtaatgaaatt 76
            |||||||||||||||||||||
Sbjct: 3081 aaagtccaaagtaatgaaatt 3061

>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome
          Length = 1884661

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 187    acaactgctacaacaccagca 207
              |||||||||||||||||||||
Sbjct: 187000 acaactgctacaacaccagca 186980

>emb|CR753890.27| Zebrafish DNA sequence from clone CH211-207D8 in linkage group 9,
              complete sequence
          Length = 201771

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 253    ttacatgcaaatccattagcc 273
              |||||||||||||||||||||
Sbjct: 163393 ttacatgcaaatccattagcc 163373

>emb|AL627344.8| Human DNA sequence from clone RP11-39H24 on chromosome 13, complete
             sequence
          Length = 97057

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   atgattaaaacccttaataa 181
             ||||||||||||||||||||
Sbjct: 26015 atgattaaaacccttaataa 25996

>ref|XM_782830.1| PREDICTED: Strongylocentrotus purpuratus similar to CG4006-PA,
            isoform A (LOC582897), mRNA
          Length = 1077

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 105  tttcacacaagagcgcgcac 124
            ||||||||||||||||||||
Sbjct: 1020 tttcacacaagagcgcgcac 1039

>gb|AC134432.4| Mus musculus BAC clone RP24-389K11 from chromosome 8, complete sequence
          Length = 150334

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   caaatccattagcctgcact 279
             ||||||||||||||||||||
Sbjct: 78811 caaatccattagcctgcact 78830

>gb|AC123908.3| Homo sapiens chromosome 16 clone CTD-2542L18, complete sequence
          Length = 185321

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 398   gcagtccagccaggggctcc 417
             ||||||||||||||||||||
Sbjct: 29847 gcagtccagccaggggctcc 29866

>gb|AC058784.17|AC058784 Homo sapiens chromosome 13 clone RP11-288O16, complete sequence
          Length = 163781

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    atgattaaaacccttaataa 181
              ||||||||||||||||||||
Sbjct: 125752 atgattaaaacccttaataa 125771

>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome
          Length = 1895994

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 194     ctacaacaccagcacaaatt 213
               ||||||||||||||||||||
Sbjct: 1715372 ctacaacaccagcacaaatt 1715353

>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome
          Length = 1892819

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   ctacaacaccagcacaaatt 213
             ||||||||||||||||||||
Sbjct: 79459 ctacaacaccagcacaaatt 79478

>emb|AL806516.4| Mouse DNA sequence from clone RP23-453N20 on chromosome X, complete
             sequence
          Length = 179534

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    aagttgacataagtttcaca 111
             ||||||||||||||||||||
Sbjct: 86401 aagttgacataagtttcaca 86382


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,215,416
Number of Sequences: 3902068
Number of extensions: 3215416
Number of successful extensions: 76629
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76509
Number of HSP's gapped (non-prelim): 120
length of query: 429
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 407
effective length of database: 17,147,199,772
effective search space: 6978910307204
effective search space used: 6978910307204
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)