>CNTN4_RAT (Q62845) Contactin-4 precursor (Brain-derived immunoglobulin|
           superfamily protein 2) (BIG-2)
          Length = 1026

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = +1

Query: 52  AAPNWVGMS*VLHIHMQKQIWWFCK---RPNP 138
           A PNWV +   +H+ M++ ++W CK   RP P
Sbjct: 314 AQPNWVQIINDIHVAMEESVFWECKANGRPKP 345

>CNTN4_MOUSE (Q69Z26) Contactin-4 precursor (Brain-derived immunoglobulin|
           superfamily protein 2) (BIG-2)
          Length = 1026

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = +1

Query: 52  AAPNWVGMS*VLHIHMQKQIWWFCK---RPNP 138
           A PNWV +   +H+ M++ ++W CK   RP P
Sbjct: 314 AQPNWVQIINDIHVAMEESVFWECKANGRPKP 345

>CNTN4_HUMAN (Q8IWV2) Contactin-4 precursor (Brain-derived immunoglobulin|
           superfamily protein 2) (BIG-2)
          Length = 1026

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = +1

Query: 52  AAPNWVGMS*VLHIHMQKQIWWFCK---RPNP 138
           A PNW+     +H+ M++ ++W CK   RP P
Sbjct: 314 AQPNWIQKINDIHVAMEENVFWECKANGRPKP 345

>AT1A1_OREMO (Q9YH26) Sodium/potassium-transporting ATPase alpha-1 chain precursor|
            (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1)
          Length = 1023

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 70   GMS*VLHIHMQKQIWWFCKRPNPIL 144
            GM   L ++  K +WWFC  P  +L
Sbjct: 973  GMDVALRMYPMKPLWWFCAFPYSLL 997


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,889,056
Number of Sequences: 219361
Number of extensions: 807769
Number of successful extensions: 1779
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1779
length of database: 80,573,946
effective HSP length: 76
effective length of database: 63,902,510
effective search space used: 1533660240
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)