| Clone Name | rbaet25f10 |
|---|---|
| Clone Library Name | barley_pub |
>KSR2_HUMAN (Q6VAB6) Kinase suppressor of ras-2 (hKSR2)| Length = 829 Score = 30.4 bits (67), Expect = 1.8 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 282 LPASSRSMYTVWSPPWQPEPITTTRPPG 365 LP S R + V +PP P +TT PPG Sbjct: 127 LPPSPRQRHAVRTPPRTPNIVTTVTPPG 154
>POPD2_MOUSE (Q9ES82) Popeye domain-containing protein 2 (Popeye protein 2)| Length = 367 Score = 30.4 bits (67), Expect = 1.8 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 3/80 (3%) Frame = +3 Query: 129 INIPLYTLSIVLYTGFS---DHIICGVDQISRKHAA*TCPENSGGAEARVQDAVLPASSR 299 I+ LYTL+ L+ F D + + + A+ PE+ E ++ AV PA +R Sbjct: 241 ISEKLYTLNDKLFAKFGLRFDIRLPSLYHVLSPSASDGEPESEKDDEEALEAAVSPAQAR 300 Query: 300 SMYTVWSPPWQPEPITTTRP 359 + V +PP P TT P Sbjct: 301 PICIVPTPPCSAPPATTNFP 320
>ARGC_SYNPX (Q7U6S4) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)| (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 357 Score = 29.6 bits (65), Expect = 3.1 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = -1 Query: 358 GRVVVIGSGCHGGDQTVYMLRDEAGKTASW 269 GRV VIG+ +GG QT+ +L+D T ++ Sbjct: 7 GRVAVIGASGYGGLQTIRLLQDHPSLTVTF 36
>HISX_AZOBR (P18786) Putative histidinol dehydrogenase (EC 1.1.1.23) (HDH)| (Fragment) Length = 128 Score = 29.6 bits (65), Expect = 3.1 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = +3 Query: 54 GCYESSRHGAEKRGPRRRALMRHIRINIPLYTLSIVLYTGFSDHIICGV 200 G ++ R G EK RR H+R +IPL LS+ +T H + G+ Sbjct: 68 GQHQQGREGQEKASGRR-----HVRCHIPLCALSV--HTTMHTHALSGI 109
>KDPD_RATRA (O34971) Sensor protein kdpD (EC 2.7.13.3)| Length = 854 Score = 28.9 bits (63), Expect = 5.3 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 11/92 (11%) Frame = +3 Query: 123 IRINIPLYTLSIVLYTGFSDHIICGVDQISRKH--AA*TCPENS-----GGAEARVQDAV 281 + ++ PL+ ++ LY + + VDQ +R+ A + E+ G+ R A+ Sbjct: 445 VTVDKPLHLFALALYITIAMMVSYVVDQAARRTRVARRSAAESELLATIAGSVLRGDGAL 504 Query: 282 --LPASSRSMYTVWSPPWQPE--PITTTRPPG 365 L + +R ++ W P PIT TRPPG Sbjct: 505 QSLVSRTRKVWVEGCDCWMPRVRPITPTRPPG 536
>ARGC_PROMM (Q7V7N1) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)| (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 357 Score = 28.9 bits (63), Expect = 5.3 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = -1 Query: 376 VSAIPGGRVVVIGSGCHGGDQTVYMLRD 293 +S + G RV VIG+ +GG QT+ +L D Sbjct: 1 MSQVRGSRVAVIGATGYGGLQTIRLLED 28
>MMPS3_MYCTU (P65378) Putative membrane protein mmpS3| Length = 299 Score = 28.9 bits (63), Expect = 5.3 Identities = 14/45 (31%), Positives = 20/45 (44%) Frame = +3 Query: 282 LPASSRSMYTVWSPPWQPEPITTTRPPGMAETVDAVRASSGTDAT 416 +P ++ + +PP P P TTT PP T A + T T Sbjct: 165 IPTATETQTVTVTPPPPPPPATTTAPPPATTTTAAAPPPTTTTPT 209
>MMPS3_MYCBO (P65379) Putative membrane protein mmpS3| Length = 299 Score = 28.9 bits (63), Expect = 5.3 Identities = 14/45 (31%), Positives = 20/45 (44%) Frame = +3 Query: 282 LPASSRSMYTVWSPPWQPEPITTTRPPGMAETVDAVRASSGTDAT 416 +P ++ + +PP P P TTT PP T A + T T Sbjct: 165 IPTATETQTVTVTPPPPPPPATTTAPPPATTTTAAAPPPTTTTPT 209
>LRP3_RAT (O88204) Low-density lipoprotein receptor-related protein 3| precursor (rLRp105) Length = 770 Score = 28.5 bits (62), Expect = 6.9 Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 9/117 (7%) Frame = -1 Query: 415 VASVPEDARTASTVSAIPGGRVVVIGSGCHGGDQTVYMLRDEAGKT---------ASWTR 263 +A+VP TA+ + ++ G ++VI GC +Y LR + + A + R Sbjct: 490 LAAVPRKVITAALIGSLVCGLLLVIALGC---AFKLYSLRTQEYRAFETQMTRLEAEFVR 546 Query: 262 ASAPPEFSGHVQAACFLEI*STPHMM*SLKPVYRTMDSVYRGIFMRI*RINARRRGP 92 APP + + + P S V + + + R R R +A RRGP Sbjct: 547 REAPPSYGQLIAQGLIPPVEDFPVYSASQASVLQNLRTAMR----RQMRRHASRRGP 599
>LRP3_HUMAN (O75074) Low-density lipoprotein receptor-related protein 3| precursor (hLRp105) Length = 770 Score = 28.5 bits (62), Expect = 6.9 Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 9/117 (7%) Frame = -1 Query: 415 VASVPEDARTASTVSAIPGGRVVVIGSGCHGGDQTVYMLRDEAGKT---------ASWTR 263 +A+VP TA+ + ++ G ++VI GC +Y LR + + A + R Sbjct: 490 LAAVPRKVITAALIGSLVCGLLLVIALGC---AFKLYSLRTQEYRAFETQMTRLEAEFVR 546 Query: 262 ASAPPEFSGHVQAACFLEI*STPHMM*SLKPVYRTMDSVYRGIFMRI*RINARRRGP 92 APP + + + P S V + + + R R R +A RRGP Sbjct: 547 REAPPSYGQLIAQGLIPPVEDFPVYSASQASVLQNLRTAMR----RQMRRHASRRGP 599
>PRLR_MOUSE (Q08501) Prolactin receptor precursor (PRL-R)| Length = 608 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/45 (31%), Positives = 19/45 (42%) Frame = +3 Query: 240 ENSGGAEARVQDAVLPASSRSMYTVWSPPWQPEPITTTRPPGMAE 374 E++G E VQ+ S T W P + PI +PP E Sbjct: 454 EDAGEEEVAVQEGAKSFPSDKQNTSWPPLQEKGPIVYAKPPDYVE 498 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,682,548 Number of Sequences: 219361 Number of extensions: 1004803 Number of successful extensions: 3152 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3086 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3151 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)