| Clone Name | rbaet25e05 |
|---|---|
| Clone Library Name | barley_pub |
>IF4E3_ARATH (Q9FK59) Eukaryotic translation initiation factor 4E type 3 (eIF4E| type 3) (eIF-4E type 3) (mRNA cap-binding protein type 3) (Novel cap-binding protein) (nCBP) Length = 221 Score = 146 bits (368), Expect = 1e-35 Identities = 67/77 (87%), Positives = 72/77 (93%) Frame = -3 Query: 392 DQLDYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPH 213 DQLD +D++CG VLS RFNEDI+SVWNRNASDHQAVM LRDSIKRHLKLPH Y+MEYKPH Sbjct: 145 DQLDDADNICGAVLSVRFNEDIISVWNRNASDHQAVMGLRDSIKRHLKLPHAYVMEYKPH 204 Query: 212 DASLRDNSSYRNTWLRG 162 DASLRDNSSYRNTWLRG Sbjct: 205 DASLRDNSSYRNTWLRG 221
>IF4E4_CAEEL (Q22888) Eukaryotic translation initiation factor 4E-4 (eIF4E-4)| (eIF-4E-4) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 212 Score = 74.3 bits (181), Expect = 6e-14 Identities = 34/73 (46%), Positives = 48/73 (65%) Frame = -3 Query: 392 DQLDYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPH 213 +Q D++CG V S R EDI+S+WNRNA D +R++++ L+LP ++EYK H Sbjct: 134 EQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQLPQNTVLEYKRH 193 Query: 212 DASLRDNSSYRNT 174 D LRD SSYR+T Sbjct: 194 DDCLRDQSSYRHT 206
>IF4E3_MOUSE (Q8BMB3) Eukaryotic translation initiation factor 4E type 3 (eIF4E| type 3) (eIF-4E type 3) (mRNA cap-binding protein type 3) (Eukaryotic translation initiation factor 4E-like 3) (eIF4E-like protein 4E-LP) Length = 245 Score = 67.8 bits (164), Expect = 6e-12 Identities = 28/65 (43%), Positives = 43/65 (66%) Frame = -3 Query: 392 DQLDYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPH 213 +Q +++CG V+S RF EDI+S+WN+ ASD +RD+++R L LP +MEYK H Sbjct: 158 EQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEYKTH 217 Query: 212 DASLR 198 S++ Sbjct: 218 TDSIK 222
>IF4E3_HUMAN (O60573) Eukaryotic translation initiation factor 4E type 3 (eIF4E| type 3) (eIF-4E type 3) (mRNA cap-binding protein type 3) (Eukaryotic translation initiation factor 4E-like 3) (Eukaryotic translation initiation factor 4E homologous protein) Length = 245 Score = 67.8 bits (164), Expect = 6e-12 Identities = 28/65 (43%), Positives = 43/65 (66%) Frame = -3 Query: 392 DQLDYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPH 213 +Q +++CG V+S RF EDI+S+WN+ ASD +RD+++R L LP +MEYK H Sbjct: 158 EQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEYKTH 217 Query: 212 DASLR 198 S++ Sbjct: 218 TDSIK 222
>IF4E_HUMAN (P06730) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 217 Score = 47.8 bits (112), Expect = 6e-06 Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%) Frame = -3 Query: 383 DYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPH-DA 207 DYSDDVCG V++ R D +++W + +AV + K L LP ++ Y+ H D Sbjct: 144 DYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADT 203 Query: 206 SLRDNSSYRNTWL 168 + + S+ +N ++ Sbjct: 204 ATKSGSTTKNRFV 216
>IF4E_BOVIN (Q9N0T5) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) Length = 217 Score = 47.8 bits (112), Expect = 6e-06 Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%) Frame = -3 Query: 383 DYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPH-DA 207 DYSDDVCG V++ R D +++W + +AV + K L LP ++ Y+ H D Sbjct: 144 DYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADT 203 Query: 206 SLRDNSSYRNTWL 168 + + S+ +N ++ Sbjct: 204 ATKSGSTTKNRFV 216
>IF4E_RAT (P63074) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 217 Score = 47.0 bits (110), Expect = 1e-05 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Frame = -3 Query: 383 DYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPH-DA 207 DYSDDVCG V++ R D +++W + AV + K L LP ++ Y+ H D Sbjct: 144 DYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADT 203 Query: 206 SLRDNSSYRNTWL 168 + + S+ +N ++ Sbjct: 204 ATKSGSTTKNRFV 216
>IF4E_RABIT (P29338) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 217 Score = 47.0 bits (110), Expect = 1e-05 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Frame = -3 Query: 383 DYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPH-DA 207 DYSDDVCG V++ R D +++W + AV + K L LP ++ Y+ H D Sbjct: 144 DYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADT 203 Query: 206 SLRDNSSYRNTWL 168 + + S+ +N ++ Sbjct: 204 ATKSGSTTKNRFV 216
>IF4E_MOUSE (P63073) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 217 Score = 47.0 bits (110), Expect = 1e-05 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Frame = -3 Query: 383 DYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPH-DA 207 DYSDDVCG V++ R D +++W + AV + K L LP ++ Y+ H D Sbjct: 144 DYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADT 203 Query: 206 SLRDNSSYRNTWL 168 + + S+ +N ++ Sbjct: 204 ATKSGSTTKNRFV 216
>IF4E3_CAEEL (O61955) Eukaryotic translation initiation factor 4E-3 (eIF4E-3)| (eIF-4E-3) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 248 Score = 45.8 bits (107), Expect = 2e-05 Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Frame = -3 Query: 383 DYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPH-DA 207 +Y D +CG V++ R D +S+W R+A+ + + +K+ L +P T ++ Y+ H D+ Sbjct: 139 EYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDS 198 Query: 206 SLRDNSSYR 180 S R +S+ + Sbjct: 199 SARTSSTVK 207
>IF4EA_BRARE (Q9DFS6) Eukaryotic translation initiation factor 4E-1A (eIF4E-1A)| (mRNA cap-binding protein) Length = 215 Score = 43.9 bits (102), Expect = 9e-05 Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 1/73 (1%) Frame = -3 Query: 383 DYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPH-DA 207 D+SDDVCG V++ R D +++W + + A++ + K L +P ++ Y+ H D Sbjct: 142 DHSDDVCGAVVNIRTKGDKIAIWTTDYENKDAIVHIGRVYKERLGVPPKVIIGYQSHADT 201 Query: 206 SLRDNSSYRNTWL 168 + + S+ +N ++ Sbjct: 202 ATKSGSTTKNKFV 214
>IF4EB_BRARE (Q9PW28) Eukaryotic translation initiation factor 4E-1B (eIF4E-1B)| (eIF4E) Length = 214 Score = 43.1 bits (100), Expect = 2e-04 Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = -3 Query: 380 YSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPH-DAS 204 +S D+CG V++ R D +++W NA + + V + K L LP ++ Y+ H D + Sbjct: 142 FSRDICGSVINIRAKGDKIALWTSNAENCETVTYIGRKYKESLGLPQKLVIGYQAHADTA 201 Query: 203 LRDNSSYRNTWL 168 + NS +N ++ Sbjct: 202 TKSNSITKNKFV 213
>IF4E2_MAIZE (O81482) Eukaryotic translation initiation factor 4E-2 (eIF4E-2)| (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(iso)4F p28 subunit) Length = 216 Score = 42.7 bits (99), Expect = 2e-04 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Frame = -3 Query: 392 DQLDYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTL----RDSIKRHLKLPHTYLME 225 +Q D ++D+CGIV S R D L++W R AS+ + + +D I + K+ +T+ Sbjct: 143 EQFDETEDICGIVASVRARGDKLALWTRTASNEAVQVNIGKKWKDVIDYNDKITYTF--- 199 Query: 224 YKPHDASLRDNSS 186 HD S RD S Sbjct: 200 ---HDDSKRDKPS 209
>IF4E_XENLA (P48597) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 213 Score = 42.4 bits (98), Expect = 3e-04 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Frame = -3 Query: 383 DYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPH-DA 207 ++SDDVCG V++ R D +++W + AV + K L LP ++ Y+ H D Sbjct: 140 EHSDDVCGAVVNVRAKGDKIAIWTTEFENKDAVTHIGRVYKERLGLPAKVVIGYQSHADT 199 Query: 206 SLRDNSSYRNTWL 168 + + S+ +N ++ Sbjct: 200 ATKSGSTTKNRFV 212
>IF4E_DROME (P48598) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 259 Score = 41.2 bits (95), Expect = 6e-04 Identities = 16/75 (21%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Frame = -3 Query: 392 DQLDYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPH 213 + D+SD +CG V++ R + +S+W + ++ +A + + ++ L+L ++Y+ H Sbjct: 183 EAFDHSDQICGAVINIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLH 242 Query: 212 -DASLRDNSSYRNTW 171 D ++ S+ ++ + Sbjct: 243 KDTMVKQGSNVKSIY 257
>IF4E1_ORYSA (P48599) Eukaryotic translation initiation factor 4E-1 (eIF4E-1)| (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) Length = 227 Score = 40.8 bits (94), Expect = 8e-04 Identities = 15/47 (31%), Positives = 30/47 (63%) Frame = -3 Query: 392 DQLDYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHL 252 +Q DY D++CG V+S R ++ +++W +NA++ A +++ K L Sbjct: 154 EQFDYGDEICGAVVSVRGKQERIAIWTKNAANEAAQISIGKQWKEFL 200
>IF4E1_ARATH (O23252) Eukaryotic translation initiation factor 4E-1 (eIF4E-1)| (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) Length = 235 Score = 40.0 bits (92), Expect = 0.001 Identities = 15/47 (31%), Positives = 30/47 (63%) Frame = -3 Query: 392 DQLDYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHL 252 +Q D+ D++CG V++ R ++ +S+W +NAS+ A +++ K L Sbjct: 162 EQFDHGDEICGAVVNIRGKQERISIWTKNASNEAAQVSIGKQWKEFL 208
>IF4E1_MAIZE (O81481) Eukaryotic translation initiation factor 4E-1 (eIF4E-1)| (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) Length = 218 Score = 40.0 bits (92), Expect = 0.001 Identities = 13/39 (33%), Positives = 28/39 (71%) Frame = -3 Query: 392 DQLDYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTL 276 +Q DY D++CG V+S R ++ +++W +NA++ A +++ Sbjct: 145 EQFDYGDEICGAVVSVRGKQERIAIWTKNAANEAAQVSI 183
>IF4E4_ARATH (Q9C7P6) Putative eukaryotic translation initiation factor 4E-4| (eIF4E type 4) (eIF-4E type 4) (mRNA cap-binding protein type 4) Length = 240 Score = 38.9 bits (89), Expect = 0.003 Identities = 14/39 (35%), Positives = 27/39 (69%) Frame = -3 Query: 392 DQLDYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTL 276 +Q D D++CG VL+ R D +S+W +NA++ +A +++ Sbjct: 167 EQFDQGDEICGAVLNFRARGDRISLWTKNAANEEAQLSI 205
>IF4E1_WHEAT (P29557) Eukaryotic translation initiation factor 4E-1 (eIF4E-1)| (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) Length = 215 Score = 38.9 bits (89), Expect = 0.003 Identities = 14/47 (29%), Positives = 30/47 (63%) Frame = -3 Query: 392 DQLDYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHL 252 +Q D+ D++CG V+S R ++ +++W +NA++ A +++ K L Sbjct: 142 EQFDFGDEICGAVVSVRQKQERVAIWTKNAANEAAQISIGKQWKEFL 188
>IF4E2_ORYSA (P48600) Eukaryotic translation initiation factor 4E-2 (eIF4E-2)| (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(iso)4F p28 subunit) Length = 206 Score = 38.1 bits (87), Expect = 0.005 Identities = 21/69 (30%), Positives = 35/69 (50%) Frame = -3 Query: 392 DQLDYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPH 213 +Q D S+++CG+V S R D L++W R AS+ + + K + + M Y H Sbjct: 133 EQFDESEEICGVVASVRQRGDKLALWTRTASNEAVQVNIGKKWKE--IVDYNDKMVYSFH 190 Query: 212 DASLRDNSS 186 D + R+ S Sbjct: 191 DDAKREKPS 199
>IF4E1_SCHPO (P78954) Eukaryotic translation initiation factor 4E-1 (eIF4E-1)| (eIF-4E-1) (mRNA cap-binding protein 1) (eIF-4F 25 kDa subunit 1) Length = 218 Score = 37.7 bits (86), Expect = 0.007 Identities = 17/66 (25%), Positives = 36/66 (54%) Frame = -3 Query: 371 DVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPHDASLRDN 192 +V G+V++ R L+VW ++ ++ + +M + K+ L LP + +E+ H+ S + Sbjct: 149 EVMGVVINMRKGFYRLAVWTKSCNNREVLMEIGTRFKQVLNLPRSETIEFSAHEDSSKSG 208 Query: 191 SSYRNT 174 S+ T Sbjct: 209 STRAKT 214
>IF4E2_WHEAT (Q03389) Eukaryotic translation initiation factor 4E-2 (eIF4E-2)| (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(iso)4F p28 subunit) Length = 209 Score = 37.4 bits (85), Expect = 0.009 Identities = 20/63 (31%), Positives = 32/63 (50%) Frame = -3 Query: 392 DQLDYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPH 213 +Q D S ++CG+V S R +D LS+W + AS+ + + K + + M Y H Sbjct: 136 EQFDESQEICGVVASVRQRQDKLSLWTKTASNEAVQVDIGKKWKE--VIDYNDKMVYSFH 193 Query: 212 DAS 204 D S Sbjct: 194 DDS 196
>IF4E_APLCA (O77210) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 215 Score = 37.4 bits (85), Expect = 0.009 Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Frame = -3 Query: 383 DYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPH-DA 207 ++S+++CG ++ R D L +W R+A +A + +K L +P ++ ++ H D Sbjct: 142 EHSEEICGATVNIRNKGDKLGLWTRDAQKTEATKKIGIKLKESLSVPPKIVIGFQAHSDT 201 Query: 206 SLRDNSSYRN 177 + + S+ +N Sbjct: 202 AGKAGSTVKN 211
>IF4E2_ARATH (O04663) Eukaryotic translation initiation factor 4E-2 (eIF4E-2)| (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(iso)4F p28 subunit) (eIF4Eiso protein) (eIF(iso)4E) Length = 198 Score = 36.6 bits (83), Expect = 0.015 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Frame = -3 Query: 392 DQLDYSDDVCGIVLSCR--FNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYK 219 +Q D +D++CG+V S R +D LS+W R S+ +M + K L + T + + Sbjct: 129 EQFDEADEICGVVASVRPQSKQDKLSLWTRTKSNEAVLMGIGKKWKEILDV--TDKITFN 186 Query: 218 PHDASLR 198 HD S R Sbjct: 187 NHDDSRR 193
>IF4E5_ARATH (Q9C7P2) Putative eukaryotic translation initiation factor 4E-5| (eIF4E type 5) (eIF-4E type 5) (mRNA cap-binding protein type 5) Length = 240 Score = 36.6 bits (83), Expect = 0.015 Identities = 13/39 (33%), Positives = 26/39 (66%) Frame = -3 Query: 392 DQLDYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTL 276 +Q D D++CG VL+ R D +S+W + A++ +A +++ Sbjct: 167 EQFDQGDEICGAVLNFRTRGDRISLWTKKAANEEAQLSI 205
>ALK_HUMAN (Q9UM73) ALK tyrosine kinase receptor precursor (EC 2.7.10.1)| (Anaplastic lymphoma kinase) (CD246 antigen) Length = 1620 Score = 33.9 bits (76), Expect = 0.096 Identities = 17/45 (37%), Positives = 27/45 (60%) Frame = -3 Query: 329 ILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPHDASLRD 195 ILS W R++S+H TL S+ RHL+ Y+ + PH+ + R+ Sbjct: 333 ILSPWMRSSSEH---CTLAVSVHRHLQPSGRYIAQLLPHNEAARE 374
>ALK_MOUSE (P97793) ALK tyrosine kinase receptor precursor (EC 2.7.10.1)| (Anaplastic lymphoma kinase) (CD246 antigen) Length = 1621 Score = 33.9 bits (76), Expect = 0.096 Identities = 18/45 (40%), Positives = 27/45 (60%) Frame = -3 Query: 329 ILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPHDASLRD 195 ILS W R++SDH TL S+ RHL+ Y+ + PH+ + R+ Sbjct: 337 ILSPWMRSSSDH---CTLAVSVHRHLQPSGRYVAQLLPHNEAGRE 378
>IF4E_CANAL (Q9P975) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 209 Score = 33.1 bits (74), Expect = 0.16 Identities = 18/60 (30%), Positives = 33/60 (55%) Frame = -3 Query: 383 DYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPHDAS 204 D ++V GIVL+ R + +W ++ D + T+ + +K+ L+L +E+ HDAS Sbjct: 140 DEENEVNGIVLNIRKQAYRVGIWTKDC-DESKLKTVGERLKKVLQLNDEQKVEFMSHDAS 198
>IF4E2_CAEEL (Q21693) Eukaryotic translation initiation factor 4E-2 (eIF4E-2)| (eIF-4E-2) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 228 Score = 32.7 bits (73), Expect = 0.21 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 10/75 (13%) Frame = -3 Query: 380 YSDDV---CGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHL-------KLPHTYL 231 +SDD+ CGIV + R +SVW N++D A + + +K+ L + P + Sbjct: 122 FSDDIESLCGIVCNVRGKGSKISVWTTNSADDGANLRIGGVLKQVLNNASMIHQRPLYDV 181 Query: 230 MEYKPHDASLRDNSS 186 + Y+ H++ + SS Sbjct: 182 LRYEDHESCQKKTSS 196
>TRRAP_MOUSE (Q80YV3) Transformation/transcription domain-associated protein| (Tra1 homolog) Length = 2565 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/57 (33%), Positives = 30/57 (52%) Frame = -3 Query: 335 EDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPHDASLRDNSSYRNTWLR 165 E I SV+ D + + DS++ +L T L+E+ PH + DN+ RN+ LR Sbjct: 505 ESITSVFITKVLDPEKQADMLDSLRIYLLQYATLLVEHAPH--HIHDNNKNRNSKLR 559
>TRRAP_HUMAN (Q9Y4A5) Transformation/transcription domain-associated protein| (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog) Length = 3859 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/57 (33%), Positives = 30/57 (52%) Frame = -3 Query: 335 EDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPHDASLRDNSSYRNTWLR 165 E I SV+ D + + DS++ +L T L+E+ PH + DN+ RN+ LR Sbjct: 1805 ESITSVFITKVLDPEKQADMLDSLRIYLLQYATLLVEHAPH--HIHDNNKNRNSKLR 1859
>SYI1_BACHK (Q6HER9) Isoleucyl-tRNA synthetase 1 (EC 6.1.1.5) (Isoleucine--tRNA| ligase 1) (IleRS 1) Length = 921 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -3 Query: 344 RFNEDILSVWNRNASDHQAVMTLRDSIKR 258 R DI+ VW + S HQAV+ RD ++R Sbjct: 517 RKETDIMDVWFDSGSSHQAVLEERDDLQR 545
>SYI1_BACCZ (Q636D1) Isoleucyl-tRNA synthetase 1 (EC 6.1.1.5) (Isoleucine--tRNA| ligase 1) (IleRS 1) Length = 921 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -3 Query: 344 RFNEDILSVWNRNASDHQAVMTLRDSIKR 258 R DI+ VW + S HQAV+ RD ++R Sbjct: 517 RKETDIMDVWFDSGSSHQAVLEERDDLQR 545
>SYI1_BACC1 (Q732H4) Isoleucyl-tRNA synthetase 1 (EC 6.1.1.5) (Isoleucine--tRNA| ligase 1) (IleRS 1) Length = 921 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -3 Query: 344 RFNEDILSVWNRNASDHQAVMTLRDSIKR 258 R DI+ VW + S HQAV+ RD ++R Sbjct: 517 RKETDIMDVWFDSGSSHQAVLEERDDLQR 545
>SYI1_BACAN (Q81WE4) Isoleucyl-tRNA synthetase 1 (EC 6.1.1.5) (Isoleucine--tRNA| ligase 1) (IleRS 1) Length = 921 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -3 Query: 344 RFNEDILSVWNRNASDHQAVMTLRDSIKR 258 R DI+ VW + S HQAV+ RD ++R Sbjct: 517 RKETDIMDVWFDSGSSHQAVLEERDDLQR 545
>NDC1_XENLA (Q6AX31) Nucleoporin NDC1 (xNDC1) (Transmembrane protein 48)| Length = 660 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/40 (32%), Positives = 27/40 (67%), Gaps = 1/40 (2%) Frame = -3 Query: 356 VLSCRFNEDILSVWNRNASDHQAVM-TLRDSIKRHLKLPH 240 +++ F+ED + V + S A++ TL++++++H KLPH Sbjct: 557 LVAASFSEDRMGVVQTSLSSVLAILLTLQEAVEKHFKLPH 596
>FIS_YERPS (Q665E1) DNA-binding protein fis| Length = 98 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = -3 Query: 344 RFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPHDAS 204 R N D+L+V N+ D LRDS+K+ LK Y + D S Sbjct: 5 RVNSDVLTVATVNSQDQVTQKPLRDSVKQALK---NYFAQLNGQDVS 48
>FIS_YERPE (Q8ZAX8) DNA-binding protein fis| Length = 98 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = -3 Query: 344 RFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPHDAS 204 R N D+L+V N+ D LRDS+K+ LK Y + D S Sbjct: 5 RVNSDVLTVATVNSQDQVTQKPLRDSVKQALK---NYFAQLNGQDVS 48
>IF4E1_CAEEL (O45551) Eukaryotic translation initiation factor 4E-1 (eIF4E-1)| (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 212 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 7/70 (10%) Frame = -3 Query: 374 DDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHL-------KLPHTYLMEYKP 216 + +CG+V + R +SVW ++ +D + M + +K L P ++ Y+ Sbjct: 122 ESICGLVCNVRGKGSKISVWTKDCNDDETNMRIGVVLKEKLMAASKDHSKPLFDVIRYED 181 Query: 215 HDASLRDNSS 186 H++ + SS Sbjct: 182 HESCQKKTSS 191
>IF4E2_SCHPO (O74743) Eukaryotic translation initiation factor 4E-2 (eIF4E-2)| (eIF-4E-2) (mRNA cap-binding protein 2) (eIF-4F 25 kDa subunit 2) Length = 243 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/66 (25%), Positives = 29/66 (43%) Frame = -3 Query: 371 DVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPHDASLRDN 192 +V G+V + R ++VW RN +D + + K L + +EY H+ S + Sbjct: 174 EVTGVVCNMRKGFYRIAVWTRNCNDKDVLEKIGLRFKEVLGISDKETIEYSAHEDSSKAG 233 Query: 191 SSYRNT 174 S T Sbjct: 234 SMRAKT 239
>SYI_BACSU (Q45477) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 921 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -3 Query: 335 EDILSVWNRNASDHQAVMTLRDSIKR 258 +DI+ VW + S HQAV+ RD + R Sbjct: 521 QDIMDVWFDSGSSHQAVLEERDDLVR 546
>FIS_SHIFL (P0A6R8) DNA-binding protein fis| Length = 98 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -3 Query: 344 RFNEDILSVWNRNASDHQAVMTLRDSIKRHLK 249 R N D+L+V N+ D LRDS+K+ LK Sbjct: 5 RVNSDVLTVSTVNSQDQVTQKPLRDSVKQALK 36
>FIS_SERMA (P0A6R9) DNA-binding protein fis| Length = 98 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -3 Query: 344 RFNEDILSVWNRNASDHQAVMTLRDSIKRHLK 249 R N D+L+V N+ D LRDS+K+ LK Sbjct: 5 RVNSDVLTVSTVNSQDQVTQKPLRDSVKQALK 36
>FIS_SALTY (P0A6R6) DNA-binding protein fis| Length = 98 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -3 Query: 344 RFNEDILSVWNRNASDHQAVMTLRDSIKRHLK 249 R N D+L+V N+ D LRDS+K+ LK Sbjct: 5 RVNSDVLTVSTVNSQDQVTQKPLRDSVKQALK 36
>FIS_SALTI (P0A6R7) DNA-binding protein fis| Length = 98 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -3 Query: 344 RFNEDILSVWNRNASDHQAVMTLRDSIKRHLK 249 R N D+L+V N+ D LRDS+K+ LK Sbjct: 5 RVNSDVLTVSTVNSQDQVTQKPLRDSVKQALK 36
>FIS_SALPA (Q5PJW3) DNA-binding protein fis| Length = 98 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -3 Query: 344 RFNEDILSVWNRNASDHQAVMTLRDSIKRHLK 249 R N D+L+V N+ D LRDS+K+ LK Sbjct: 5 RVNSDVLTVSTVNSQDQVTQKPLRDSVKQALK 36
>FIS_PROVU (O52534) DNA-binding protein fis| Length = 98 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -3 Query: 344 RFNEDILSVWNRNASDHQAVMTLRDSIKRHLK 249 R N D+L+V N+ D LRDS+K+ LK Sbjct: 5 RVNSDVLTVATVNSQDQVTQKPLRDSVKQALK 36
>FIS_PHOLL (Q7N015) DNA-binding protein fis| Length = 98 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -3 Query: 344 RFNEDILSVWNRNASDHQAVMTLRDSIKRHLK 249 R N D+L+V N+ D LRDS+K+ LK Sbjct: 5 RVNSDVLTVATVNSQDQVTQKPLRDSVKQALK 36
>FIS_KLEPN (O52537) DNA-binding protein fis (Fragment)| Length = 93 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -3 Query: 344 RFNEDILSVWNRNASDHQAVMTLRDSIKRHLK 249 R N D+L+V N+ D LRDS+K+ LK Sbjct: 5 RVNSDVLTVSTVNSQDQVTQKPLRDSVKQALK 36
>FIS_ECOLI (P0A6R3) DNA-binding protein fis (Factor-for-inversion stimulation| protein) (Hin recombinational enhancer-binding protein) Length = 98 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -3 Query: 344 RFNEDILSVWNRNASDHQAVMTLRDSIKRHLK 249 R N D+L+V N+ D LRDS+K+ LK Sbjct: 5 RVNSDVLTVSTVNSQDQVTQKPLRDSVKQALK 36
>FIS_ECOL6 (P0A6R4) DNA-binding protein fis| Length = 98 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -3 Query: 344 RFNEDILSVWNRNASDHQAVMTLRDSIKRHLK 249 R N D+L+V N+ D LRDS+K+ LK Sbjct: 5 RVNSDVLTVSTVNSQDQVTQKPLRDSVKQALK 36
>FIS_ECO57 (P0A6R5) DNA-binding protein fis| Length = 98 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -3 Query: 344 RFNEDILSVWNRNASDHQAVMTLRDSIKRHLK 249 R N D+L+V N+ D LRDS+K+ LK Sbjct: 5 RVNSDVLTVSTVNSQDQVTQKPLRDSVKQALK 36
>UVRC_VIBF1 (Q5E4C5) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 608 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = -3 Query: 296 HQAVMTLRDSIKRHLKLPHTYLMEYKP-HDASLRDNSSY 183 HQ +T+ S L L H Y+ +Y P ++ LRD+ SY Sbjct: 63 HQVDVTVTHSETEALILEHNYIKQYLPKYNVLLRDDKSY 101
>SYI_GEOKA (Q5L0V9) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 924 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -3 Query: 332 DILSVWNRNASDHQAVMTLRDSIKR 258 DI+ VW + S HQAV+ RD + R Sbjct: 521 DIMDVWFDSGSSHQAVLVERDDLVR 545
>IF4E5_CAEEL (P56570) Eukaryotic translation initiation factor 4E-5 (eIF4E-5)| (eIF-4E-5) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 240 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/41 (29%), Positives = 21/41 (51%) Frame = -3 Query: 374 DDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHL 252 + +CG+V + R +SVW +N +D M + +K L Sbjct: 158 ESICGLVCNVRGQGSKISVWTKNCNDDDTNMRIGVVLKEKL 198
>SYI1_BACCR (Q819R4) Isoleucyl-tRNA synthetase 1 (EC 6.1.1.5) (Isoleucine--tRNA| ligase 1) (IleRS 1) Length = 921 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -3 Query: 344 RFNEDILSVWNRNASDHQAVMTLRDSIKR 258 R DI+ VW + S HQAV+ R+ ++R Sbjct: 517 RKETDIMDVWFDSGSSHQAVLEEREDLQR 545
>SYI_LISMO (Q8Y5N8) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 921 Score = 27.7 bits (60), Expect = 6.9 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -3 Query: 332 DILSVWNRNASDHQAVMTLRDSIKR 258 DI+ VW + S HQAV+ R + R Sbjct: 521 DIMDVWFDSGSSHQAVLNARPELSR 545
>SYI_LISMF (Q71Y01) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 921 Score = 27.7 bits (60), Expect = 6.9 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -3 Query: 332 DILSVWNRNASDHQAVMTLRDSIKR 258 DI+ VW + S HQAV+ R + R Sbjct: 521 DIMDVWFDSGSSHQAVLNARPELSR 545
>SYI_LISIN (Q929Z6) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 921 Score = 27.7 bits (60), Expect = 6.9 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -3 Query: 332 DILSVWNRNASDHQAVMTLRDSIKR 258 DI+ VW + S HQAV+ R + R Sbjct: 521 DIMDVWFDSGSSHQAVLNARPELSR 545
>FBN1_MOUSE (Q61554) Fibrillin-1 precursor| Length = 2871 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/49 (38%), Positives = 21/49 (42%) Frame = +1 Query: 187 DELSRSEASCGLYSIR*VCGSFKCLLIESLNVITAWWSDAFRFQTLRMS 333 DE C L + GSFKCL E +W S R Q LRMS Sbjct: 2015 DECVEEPEICALGTCSNTEGSFKCLCPEGF----SWSSSGRRCQDLRMS 2059
>SYI_BACLD (Q65JV7) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 922 Score = 27.7 bits (60), Expect = 6.9 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -3 Query: 335 EDILSVWNRNASDHQAVMTLRDSIKR 258 +DI+ VW + S HQAV+ R+ + R Sbjct: 521 QDIMDVWFDSGSSHQAVLEEREDLVR 546
>HYALP_MOUSE (P48794) Hyaluronidase PH-20 precursor (EC 3.2.1.35) (Hyal-PH20)| (Sperm surface protein PH-20) (Sperm adhesion molecule 1) Length = 512 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Frame = -3 Query: 308 NASDHQAVMTLRDSIKRHLKLPHTYLMEYKPHD---ASLRDNSSYRNTWLRG*PP 153 N ++H + R + HL+ T + Y P D ++ D +R TWLR P Sbjct: 105 NQAEHYGGIPQRGDYQAHLRKAKTDIEHYIPDDKLGLAIIDWEEWRPTWLRNWKP 159
>SPDYC_HUMAN (Q5MJ68) Speedy protein C (Rapid inducer of G2/M progression in| oocytes C) (RINGO C) (hSpy/Ringo C) Length = 293 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Frame = +3 Query: 30 FCRVHGSMTKSNHTS-WLG*NFRTENPQGLSSREGP*LALTTWRLTSQPCVPVGRVVSQR 206 F R H +++ H+S +L + + L EGP + W L C+ VG+ + QR Sbjct: 96 FQRAHLKLSEYTHSSLFLALYLANDMEEDL---EGPKCEIFPWALGKDWCLRVGKFLHQR 152 Query: 207 GIMW 218 +W Sbjct: 153 DKLW 156
>CD6_MOUSE (Q61003) T-cell differentiation antigen CD6 precursor| Length = 665 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Frame = -3 Query: 317 WNRNASDHQA-VMTLRDSIKRHLKLPHTYLMEYKPHDASLRDNSSYRNTWLRG*PPCCQG 141 WNR A++ + DS K +P T E P S +S+ TW R C+G Sbjct: 73 WNRAATEAVCKALNCGDSGKVTYLMPPT--SELPPGATSGNTSSAGNTTWARAPTERCRG 130 Query: 140 *SWPF 126 +W F Sbjct: 131 ANWQF 135
>YV59_CAEEL (P50439) Hypothetical protein F53A9.9| Length = 147 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = +2 Query: 290 PGGL-MHSDSRHSGCLH*NDNLAQCHKHHHYNQVGH 394 PGG+ +H D H G H + + H HHH + GH Sbjct: 110 PGGVDVHDDHHHDG--HHKKHGRKEHDHHHGHHHGH 143 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,885,637 Number of Sequences: 219361 Number of extensions: 989395 Number of successful extensions: 2610 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 2464 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2607 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)