ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet25d06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X66013.1|TACATHBG T.aestivum gene for cathepsin B (Al16) 198 9e-48
2emb|X66012.1|TACATHBA T.aestivum mRNA 1 for cathepsin B (2529) 153 5e-34
3emb|AJ310426.1|HVU310426 Hordeum vulgare mRNA for cathepsin B (c... 137 3e-29
4dbj|AK101093.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 4e-16
5dbj|AK100225.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 4e-16
6dbj|AK068459.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 4e-16
7dbj|AK064820.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 4e-16
8dbj|AK059697.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 4e-16
9gb|AY916493.1| Oryza sativa (japonica cultivar-group) cathepsin ... 94 4e-16
10gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome... 92 2e-15
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
12gb|BT016464.1| Zea mays clone Contig297 mRNA sequence 74 4e-10
13gb|AY112465.1| Zea mays CL31697_1 mRNA sequence 54 3e-04
14gb|BT014465.1| Lycopersicon esculentum clone 133812F, mRNA sequence 42 1.3
15gb|AY348717.1|AY348718S2 Gallus gallus leptin receptor gene, int... 42 1.3
16emb|AL645645.14| Mouse DNA sequence from clone RP23-153G17 on ch... 42 1.3
17gb|AC150524.3| Bos taurus BAC CH240-89P8 (Children's Hospital O... 40 5.2
18ref|XM_420965.1| PREDICTED: Gallus gallus similar to ubiquitin s... 40 5.2
19gb|AC132270.3| Mus musculus BAC clone RP24-338C23 from chromosom... 40 5.2
20gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 5.2
21emb|CT009494.4| Mouse DNA sequence from clone RP23-125D7 on chro... 40 5.2
22gb|AF550129.1| Homo sapiens transcription factor Dp-1 (TFDP1) ge... 40 5.2
23gb|AC117237.2| Mus musculus BAC clone RP23-431G18 from 13, compl... 40 5.2
24emb|AL442125.13| Human DNA sequence from clone RP11-230F18 on ch... 40 5.2
25emb|AL354657.12| Human DNA sequence from clone GS1-80M18 on chro... 40 5.2
26ref|XM_780892.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.2
27emb|BX294116.3| Mouse DNA sequence from clone RP23-393O10 on chr... 40 5.2
28dbj|AK048530.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 5.2
29dbj|AK028202.1| Mus musculus 11 days embryo whole body cDNA, RIK... 40 5.2
30dbj|AK006939.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 5.2
31gb|AC010105.12| Homo sapiens BAC clone RP11-563E24 from 2, compl... 40 5.2
32dbj|AK173170.1| Mus musculus mRNA for mKIAA1431 protein 40 5.2
33gb|AY528713.1| Mus musculus ZFP28 mRNA, partial cds 40 5.2
34gb|AC009481.4|AC009481 Homo sapiens BAC clone RP11-303D3 from 1,... 40 5.2
35emb|BX120008.9| Zebrafish DNA sequence from clone CH211-215G18 i... 40 5.2
36gb|AC104971.5| Homo sapiens chromosome 18, clone RP11-126O1, com... 40 5.2
37gb|AC171902.2| Capitella capitata clone JGIBGZA-45E7, complete s... 40 5.2
38ref|NM_175247.1| Mus musculus zinc finger protein 28 (Zfp28), mRNA 40 5.2
39gb|BC062116.1| Mus musculus zinc finger protein 28, mRNA (cDNA c... 40 5.2
40gb|M36516.1|MUS2NF5MK Mouse zinc finger protein (mkr5) mRNA, 3' end 40 5.2
41dbj|AP005328.3| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 5.2
42dbj|AP005211.2| Homo sapiens genomic DNA, chromosome 18, clone:R... 40 5.2 
>emb|X66013.1|TACATHBG T.aestivum gene for cathepsin B (Al16)
          Length = 4792

 Score =  198 bits (100), Expect = 9e-48
 Identities = 164/186 (88%), Gaps = 7/186 (3%)
 Strand = Plus / Minus

                                                                        
Query: 201  ggcttcattttacattcaaacagctaatttcaactgcgtttgtgaccaaggcgctgctca 260
            |||||||||| |||| |||||||||||||||||||| ||| |||       | || ||||
Sbjct: 4418 ggcttcatttgacatgcaaacagctaatttcaactgtgttcgtg-------ctctcctca 4366

                                                                        
Query: 261  aagtatggcggttccaaaggcgacatcgttgtttctgtccatgttctttgtcgagggcat 320
            ||||||||| ||||||||||||||||| ||||||||| || |||||||||||||||||||
Sbjct: 4365 aagtatggccgttccaaaggcgacatcattgtttctggccgtgttctttgtcgagggcat 4306

                                                                        
Query: 321  gccggcagtaacatcttcttcgatgccacattcattcttgtcccttatgatcttgaagta 380
             ||||||||||||||  ||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 4305 accggcagtaacatcgccttcgatgccacattcattctcgccccttatgatcttgaagta 4246

                  
Query: 381  tccgtc 386
            ||||||
Sbjct: 4245 tccgtc 4240



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 1    aacaacatatcagcgcttgcgctagtgtacggagtacagaatcctgga 48
            ||||||||||||||| |||||||||||||| || ||||| ||| ||||
Sbjct: 4486 aacaacatatcagcgtttgcgctagtgtacagaatacagtatcatgga 4439



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 168  ggcttcattttacattcaaacagctaattt 197
            |||||||||| |||| ||||||||||||||
Sbjct: 4418 ggcttcatttgacatgcaaacagctaattt 4389
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>emb|X66012.1|TACATHBA T.aestivum mRNA 1 for cathepsin B (2529)
          Length = 1065

 Score =  153 bits (77), Expect = 5e-34
 Identities = 86/89 (96%)
 Strand = Plus / Minus

                                                                       
Query: 301 atgttctttgtcgagggcatgccggcagtaacatcttcttcgatgccacattcattcttg 360
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 893 atgttctttgtcgagggcataccggcagtaacatcttcttcgatgccacattcattcttg 834

                                        
Query: 361 tcccttatgatcttgaagtatccgtcatc 389
            ||||||||||||||||||| ||||||||
Sbjct: 833 ccccttatgatcttgaagtacccgtcatc 805
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>emb|AJ310426.1|HVU310426 Hordeum vulgare mRNA for cathepsin B (cathB gene)
          Length = 1277

 Score =  137 bits (69), Expect = 3e-29
 Identities = 84/89 (94%)
 Strand = Plus / Minus

                                                                        
Query: 301  atgttctttgtcgagggcatgccggcagtaacatcttcttcgatgccacattcattcttg 360
            ||||||||  |||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 1080 atgttcttcatcgagggcataccggctgtaacatcttcttcgatgccacattcattcttg 1021

                                         
Query: 361  tcccttatgatcttgaagtatccgtcatc 389
             ||||||||||||||||||||||||||||
Sbjct: 1020 ccccttatgatcttgaagtatccgtcatc 992
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>dbj|AK101093.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024N03, full
            insert sequence
          Length = 1437

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                        
Query: 299  ccatgttctttgtcgagggcatgccggcagtaacatcttcttcgatgccacattcattct 358
            |||||||||| ||||||||||| || |||  |||||||||||||||||||||||| ||  
Sbjct: 1222 ccatgttcttcgtcgagggcataccagcaacaacatcttcttcgatgccacattcgtttg 1163

                                           
Query: 359  tgtcccttatgatcttgaagtatccgtcatc 389
            || ||||||||||||||||||| || |||||
Sbjct: 1162 tgccccttatgatcttgaagtacccatcatc 1132
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>dbj|AK100225.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047M19, full
            insert sequence
          Length = 1436

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                        
Query: 299  ccatgttctttgtcgagggcatgccggcagtaacatcttcttcgatgccacattcattct 358
            |||||||||| ||||||||||| || |||  |||||||||||||||||||||||| ||  
Sbjct: 1220 ccatgttcttcgtcgagggcataccagcaacaacatcttcttcgatgccacattcgtttg 1161

                                           
Query: 359  tgtcccttatgatcttgaagtatccgtcatc 389
            || ||||||||||||||||||| || |||||
Sbjct: 1160 tgccccttatgatcttgaagtacccatcatc 1130
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>dbj|AK068459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151C17, full
            insert sequence
          Length = 3464

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                        
Query: 299  ccatgttctttgtcgagggcatgccggcagtaacatcttcttcgatgccacattcattct 358
            |||||||||| ||||||||||| || |||  |||||||||||||||||||||||| ||  
Sbjct: 1351 ccatgttcttcgtcgagggcataccagcaacaacatcttcttcgatgccacattcgtttg 1292

                                           
Query: 359  tgtcccttatgatcttgaagtatccgtcatc 389
            || ||||||||||||||||||| || |||||
Sbjct: 1291 tgccccttatgatcttgaagtacccatcatc 1261
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>dbj|AK064820.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E23, full
            insert sequence
          Length = 1369

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                        
Query: 299  ccatgttctttgtcgagggcatgccggcagtaacatcttcttcgatgccacattcattct 358
            |||||||||| ||||||||||| || |||  |||||||||||||||||||||||| ||  
Sbjct: 1153 ccatgttcttcgtcgagggcataccagcaacaacatcttcttcgatgccacattcgtttg 1094

                                           
Query: 359  tgtcccttatgatcttgaagtatccgtcatc 389
            || ||||||||||||||||||| || |||||
Sbjct: 1093 tgccccttatgatcttgaagtacccatcatc 1063
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>dbj|AK059697.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-C04, full
            insert sequence
          Length = 1565

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                        
Query: 299  ccatgttctttgtcgagggcatgccggcagtaacatcttcttcgatgccacattcattct 358
            |||||||||| ||||||||||| || |||  |||||||||||||||||||||||| ||  
Sbjct: 1152 ccatgttcttcgtcgagggcataccagcaacaacatcttcttcgatgccacattcgtttg 1093

                                           
Query: 359  tgtcccttatgatcttgaagtatccgtcatc 389
            || ||||||||||||||||||| || |||||
Sbjct: 1092 tgccccttatgatcttgaagtacccatcatc 1062
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>gb|AY916493.1| Oryza sativa (japonica cultivar-group) cathepsin B-like cysteine
            protease mRNA, complete cds
          Length = 1475

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                        
Query: 299  ccatgttctttgtcgagggcatgccggcagtaacatcttcttcgatgccacattcattct 358
            |||||||||| ||||||||||| || |||  |||||||||||||||||||||||| ||  
Sbjct: 1174 ccatgttcttcgtcgagggcataccagcaacaacatcttcttcgatgccacattcgtttg 1115

                                           
Query: 359  tgtcccttatgatcttgaagtatccgtcatc 389
            || ||||||||||||||||||| || |||||
Sbjct: 1114 tgccccttatgatcttgaagtacccatcatc 1084
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>gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0570A02,
              complete sequence
          Length = 146541

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                          
Query: 299    ccatgttctttgtcgagggcatgccggcagtaacatcttcttcgatgccacattcattct 358
              |||||||||| ||||||||||| || |||  |||||||||||||||||||||||| ||  
Sbjct: 111794 ccatgttcttcgtcgagggcataccagcaacaacatcttcttcgatgccacattcgtttg 111735

                                    
Query: 359    tgtcccttatgatcttgaagta 380
              || |||||||||||||||||||
Sbjct: 111734 tgccccttatgatcttgaagta 111713
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                            
Query: 299      ccatgttctttgtcgagggcatgccggcagtaacatcttcttcgatgccacattcattct 358
                |||||||||| ||||||||||| || |||  |||||||||||||||||||||||| ||  
Sbjct: 14031717 ccatgttcttcgtcgagggcataccagcaacaacatcttcttcgatgccacattcgtttg 14031658

                                      
Query: 359      tgtcccttatgatcttgaagta 380
                || |||||||||||||||||||
Sbjct: 14031657 tgccccttatgatcttgaagta 14031636
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>gb|BT016464.1| Zea mays clone Contig297 mRNA sequence
          Length = 1136

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                       
Query: 299 ccatgttctttgtcgagggcatgccggcagtaacatcttcttcgatgccacattcattct 358
           |||| ||||||||||| ||||| || |||  |||  | || ||||||||||||||||| |
Sbjct: 861 ccatattctttgtcgatggcattccagcaacaacgccctcctcgatgccacattcatttt 802

                                    
Query: 359 tgtcccttatgatcttgaagtatcc 383
           || ||||||||||||||||||||||
Sbjct: 801 tgccccttatgatcttgaagtatcc 777
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>gb|AY112465.1| Zea mays CL31697_1 mRNA sequence
          Length = 1472

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 340 tcgatgccacattcattcttgtcccttatgatcttgaagtatccgtcatc 389
           |||||||||||||||     | |||||||||||||||||||||| |||||
Sbjct: 269 tcgatgccacattcannnnngccccttatgatcttgaagtatccatcatc 318
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>gb|BT014465.1| Lycopersicon esculentum clone 133812F, mRNA sequence
          Length = 1937

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 292 tttctgtccatgttctttgtc 312
           |||||||||||||||||||||
Sbjct: 872 tttctgtccatgttctttgtc 852
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>gb|AY348717.1|AY348718S2 Gallus gallus leptin receptor gene, intron 19 and partial cds;
            alternatively spliced
          Length = 3327

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 202  gcttcattttacattcaaaca 222
            |||||||||||||||||||||
Sbjct: 1323 gcttcattttacattcaaaca 1303



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 169  gcttcattttacattcaaaca 189
            |||||||||||||||||||||
Sbjct: 1323 gcttcattttacattcaaaca 1303



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 136  gcttcattttacattcaaaca 156
            |||||||||||||||||||||
Sbjct: 1323 gcttcattttacattcaaaca 1303



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 103  gcttcattttacattcaaaca 123
            |||||||||||||||||||||
Sbjct: 1323 gcttcattttacattcaaaca 1303



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 70   gcttcattttacattcaaaca 90
            |||||||||||||||||||||
Sbjct: 1323 gcttcattttacattcaaaca 1303
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>emb|AL645645.14| Mouse DNA sequence from clone RP23-153G17 on chromosome 4, complete
             sequence
          Length = 70734

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 292   tttctgtccatgttctttgtc 312
             |||||||||||||||||||||
Sbjct: 51588 tttctgtccatgttctttgtc 51608
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>gb|AC150524.3| Bos taurus  BAC CH240-89P8 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 189720

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 42     tcctggagccatcaaatctatttt 65
              ||||||||| ||||||||||||||
Sbjct: 110265 tcctggagcaatcaaatctatttt 110242
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>ref|XM_420965.1| PREDICTED: Gallus gallus similar to ubiquitin specific protease 47
            (LOC423032), mRNA
          Length = 5401

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 214  attcaaacagctaatttcaa 233
            ||||||||||||||||||||
Sbjct: 2187 attcaaacagctaatttcaa 2206
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>gb|AC132270.3| Mus musculus BAC clone RP24-338C23 from chromosome 5, complete sequence
          Length = 145471

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   ttcattcttgtcccttatga 370
             ||||||||||||||||||||
Sbjct: 75351 ttcattcttgtcccttatga 75332
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    gtgaccaaggcgctgctcaa 261
              ||||||||||||||||||||
Sbjct: 898856 gtgaccaaggcgctgctcaa 898875
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>emb|CT009494.4| Mouse DNA sequence from clone RP23-125D7 on chromosome 13, complete
              sequence
          Length = 206416

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     gagtacagaatcctggagcc 51
              ||||||||||||||||||||
Sbjct: 196725 gagtacagaatcctggagcc 196744
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>gb|AF550129.1| Homo sapiens transcription factor Dp-1 (TFDP1) gene, partial cds
          Length = 55319

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 71   cttcattttacattcaaaca 90
            ||||||||||||||||||||
Sbjct: 8039 cttcattttacattcaaaca 8058



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  cttcattttacattcaaaca 123
            ||||||||||||||||||||
Sbjct: 8039 cttcattttacattcaaaca 8058



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 137  cttcattttacattcaaaca 156
            ||||||||||||||||||||
Sbjct: 8039 cttcattttacattcaaaca 8058



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  cttcattttacattcaaaca 189
            ||||||||||||||||||||
Sbjct: 8039 cttcattttacattcaaaca 8058



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 203  cttcattttacattcaaaca 222
            ||||||||||||||||||||
Sbjct: 8039 cttcattttacattcaaaca 8058
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>gb|AC117237.2| Mus musculus BAC clone RP23-431G18 from 13, complete sequence
          Length = 200110

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     gagtacagaatcctggagcc 51
              ||||||||||||||||||||
Sbjct: 124263 gagtacagaatcctggagcc 124282
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>emb|AL442125.13| Human DNA sequence from clone RP11-230F18 on chromosome 13 Contains the
              5' end of the gene for FLJ10704 (FLJ20092), a  novel gene,
              a novel gene (FLJ20623), the TFDP1 gene for transcription
              factor Dp-1 (DP-1, DRTF1) and 5 CpG islands, complete
              sequence
          Length = 184889

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     cttcattttacattcaaaca 90
              ||||||||||||||||||||
Sbjct: 130908 cttcattttacattcaaaca 130927



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    cttcattttacattcaaaca 123
              ||||||||||||||||||||
Sbjct: 130908 cttcattttacattcaaaca 130927



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    cttcattttacattcaaaca 156
              ||||||||||||||||||||
Sbjct: 130908 cttcattttacattcaaaca 130927



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    cttcattttacattcaaaca 189
              ||||||||||||||||||||
Sbjct: 130908 cttcattttacattcaaaca 130927



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    cttcattttacattcaaaca 222
              ||||||||||||||||||||
Sbjct: 130908 cttcattttacattcaaaca 130927
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>emb|AL354657.12| Human DNA sequence from clone GS1-80M18 on chromosome 1, complete
             sequence
          Length = 60059

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 342   gatgccacattcattcttgt 361
             ||||||||||||||||||||
Sbjct: 18136 gatgccacattcattcttgt 18117
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>ref|XM_780892.1| PREDICTED: Strongylocentrotus purpuratus similar to cadherin-like 23
            (LOC580862), mRNA
          Length = 2622

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  tatgatcttgaagtatccgt 385
            ||||||||||||||||||||
Sbjct: 2322 tatgatcttgaagtatccgt 2341
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>emb|BX294116.3| Mouse DNA sequence from clone RP23-393O10 on chromosome 11 Contains the
             3' ends of two genes encoding novel proteins, complete
             sequence
          Length = 40232

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    cattttacattcaaacagat 93
             ||||||||||||||||||||
Sbjct: 31263 cattttacattcaaacagat 31282



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   cattttacattcaaacagat 126
             ||||||||||||||||||||
Sbjct: 31263 cattttacattcaaacagat 31282



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   cattttacattcaaacagat 159
             ||||||||||||||||||||
Sbjct: 31263 cattttacattcaaacagat 31282
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>dbj|AK048530.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130069O12 product:zinc finger protein 28,
            full insert sequence
          Length = 3253

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  ttcattcttgtcccttatga 370
            ||||||||||||||||||||
Sbjct: 2606 ttcattcttgtcccttatga 2625
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>dbj|AK028202.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:2700045L05 product:zinc finger
            protein 28, full insert sequence
          Length = 2683

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  ttcattcttgtcccttatga 370
            ||||||||||||||||||||
Sbjct: 2587 ttcattcttgtcccttatga 2606
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>dbj|AK006939.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700072J09 product:unclassifiable, full
           insert sequence
          Length = 581

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 351 ttcattcttgtcccttatga 370
           ||||||||||||||||||||
Sbjct: 309 ttcattcttgtcccttatga 290
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>gb|AC010105.12| Homo sapiens BAC clone RP11-563E24 from 2, complete sequence
          Length = 193320

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    acattcaaacagctaattta 198
              ||||||||||||||||||||
Sbjct: 117373 acattcaaacagctaattta 117354
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>dbj|AK173170.1| Mus musculus mRNA for mKIAA1431 protein
          Length = 4386

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  ttcattcttgtcccttatga 370
            ||||||||||||||||||||
Sbjct: 2579 ttcattcttgtcccttatga 2598
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>gb|AY528713.1| Mus musculus ZFP28 mRNA, partial cds
          Length = 2636

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  ttcattcttgtcccttatga 370
            ||||||||||||||||||||
Sbjct: 2520 ttcattcttgtcccttatga 2539
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>gb|AC009481.4|AC009481 Homo sapiens BAC clone RP11-303D3 from 1, complete sequence
          Length = 191896

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   gatgccacattcattcttgt 361
             ||||||||||||||||||||
Sbjct: 39931 gatgccacattcattcttgt 39950
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>emb|BX120008.9| Zebrafish DNA sequence from clone CH211-215G18 in linkage group 14,
              complete sequence
          Length = 221928

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     gccatcaaatctattttacg 68
              ||||||||||||||||||||
Sbjct: 128332 gccatcaaatctattttacg 128351
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>gb|AC104971.5| Homo sapiens chromosome 18, clone RP11-126O1, complete sequence
          Length = 164132

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   ctgtccatgttctttgtcga 314
             ||||||||||||||||||||
Sbjct: 49884 ctgtccatgttctttgtcga 49865
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>gb|AC171902.2| Capitella capitata clone JGIBGZA-45E7, complete sequence
          Length = 33620

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 75    attttacattcaaacagataattt 98
             ||||||||||| ||||||||||||
Sbjct: 13094 attttacattcgaacagataattt 13071



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 141   attttacattcaaacagataattt 164
             ||||||||||| ||||||||||||
Sbjct: 13094 attttacattcgaacagataattt 13071



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 108   attttacattcaaacagataattt 131
             ||||||||||| ||||||||||||
Sbjct: 13094 attttacattcgaacagataattt 13071
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>ref|NM_175247.1| Mus musculus zinc finger protein 28 (Zfp28), mRNA
          Length = 3253

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  ttcattcttgtcccttatga 370
            ||||||||||||||||||||
Sbjct: 2606 ttcattcttgtcccttatga 2625
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>gb|BC062116.1| Mus musculus zinc finger protein 28, mRNA (cDNA clone MGC:69828
            IMAGE:6817400), complete cds
          Length = 2772

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  ttcattcttgtcccttatga 370
            ||||||||||||||||||||
Sbjct: 2582 ttcattcttgtcccttatga 2601
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>gb|M36516.1|MUS2NF5MK Mouse zinc finger protein (mkr5) mRNA, 3' end
          Length = 2433

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  ttcattcttgtcccttatga 370
            ||||||||||||||||||||
Sbjct: 1896 ttcattcttgtcccttatga 1915
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>dbj|AP005328.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-689C9, complete
              sequences
          Length = 170427

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 289    ttgtttctgtccatgttctttgtc 312
              |||||||||| |||||||||||||
Sbjct: 110959 ttgtttctgttcatgttctttgtc 110982
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>dbj|AP005211.2| Homo sapiens genomic DNA, chromosome 18, clone:RP11-267C19, complete
             sequence
          Length = 156794

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 289   ttgtttctgtccatgttctttgtc 312
             |||||||||| |||||||||||||
Sbjct: 59136 ttgtttctgttcatgttctttgtc 59159


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,125,475
Number of Sequences: 3902068
Number of extensions: 4125475
Number of successful extensions: 77327
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77207
Number of HSP's gapped (non-prelim): 119
length of query: 389
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 367
effective length of database: 17,147,199,772
effective search space: 6293022316324
effective search space used: 6293022316324
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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