>IKKB_DROME (Q9VEZ5) Inhibitor of nuclear factor kappa B kinase beta subunit|
           (EC 2.7.11.1) (DmIKK-beta) (Immune response deficient
           protein 5) (IKK-like protein)
           (Lipopolysaccharide-activated kinase) (DLAK) (Cactus
           kinase IKK)
          Length = 751

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 429 PPLSLKAMEPIKRSSSCCKEPPISMLSRQFVAAKYK 322
           PP+ L   +  K       EP +S+LSR+F+A K+K
Sbjct: 436 PPVMLYIFQVKKECDYKIPEPILSILSRKFIANKFK 471

>HEM1_CHLMU (Q9PLR2) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)|
          Length = 333

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
 Frame = -2

Query: 444 SYCKEPPLSLKAMEPIKRSSSCCKEP------PISMLSRQFVAAKYKGMFSF 307
           ++C   PLSL++M+ + R   C ++P        S L   F  + ++G++ F
Sbjct: 210 TFCSRQPLSLRSMDQVLREEVCFQDPYHVIFLGSSELRHAFPRSLWEGVWDF 261

>NEDD1_MOUSE (P33215) Protein NEDD1 (Neural precursor cell expressed|
           developmentally down-regulated protein 1)
          Length = 660

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 22/84 (26%), Positives = 35/84 (41%)
 Frame = +2

Query: 125 KIVHTSTKEFSKPCPLMSNQKSTDQNTVQHEALLIITGSTHVNSVGGLRNIAQEASWF*L 304
           KIV +S K   KP PL+   +   Q  V   +  +   S  +N+   + ++  +     L
Sbjct: 58  KIVVSSCK--CKPVPLLELAEGQKQTCVDLNSTSMYLASGGLNNTVNIWDLKSKRLHRSL 115

Query: 305 KKENIPLYLAATNWRDSMLIGGSL 376
           K     +   A NW D  +  GSL
Sbjct: 116 KDHKCEVTCVAYNWNDCYIASGSL 139

>ECX2_SULSO (Q9UXC0) Probable exosome complex exonuclease 2 (EC 3.1.13.-)|
          Length = 275

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 20/56 (35%), Positives = 28/56 (50%)
 Frame = -2

Query: 234 VIISKASCWTVF*SVDFWLDISGHGFENSLVDVCTILRLSSIFAHYSTKDDTVFAH 67
           VI    S WTV      WLD+    +  +++D CT   L+S+ A Y+TK   V  H
Sbjct: 130 VIEPGKSVWTV------WLDVYVLDYGGNVLDACT---LASVAALYNTKVYKVEQH 176


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,110,499
Number of Sequences: 219361
Number of extensions: 1160957
Number of successful extensions: 2937
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2937
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)