ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet25c08 |
|---|---|
| Clone Library Name | barley_pub |
>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 213 bits (543), Expect = 1e-55 Identities = 105/115 (91%), Positives = 109/115 (94%) Frame = -1 Query: 434 LVATGKPESFSGPFLVPSYRGSSFLDPKCRGGSTGYDNAVALPAGGRGDEEELAKENVKN 255 LVA+GKPESFSG FLVPSYRGSSFLDPK RGGSTGYDNAVALPAGGRGDEEEL KENVKN Sbjct: 218 LVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKN 277 Query: 254 ASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 90 SSSTG ITLSVT+SKPETGEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLE Sbjct: 278 TSSSTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 332
>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 212 bits (539), Expect = 4e-55 Identities = 103/115 (89%), Positives = 109/115 (94%) Frame = -1 Query: 434 LVATGKPESFSGPFLVPSYRGSSFLDPKCRGGSTGYDNAVALPAGGRGDEEELAKENVKN 255 LVATGKPESFSG +LVPSYRGSSFLDPK RGGS GYDNAVALPAGGRGDEEEL KEN+K+ Sbjct: 215 LVATGKPESFSGSYLVPSYRGSSFLDPKGRGGSAGYDNAVALPAGGRGDEEELVKENIKD 274 Query: 254 ASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 90 SSSTG ITLSVTKSKPETGEVIGVFES+QPSDTDLG+KAPKDVKIQG+WYAQLE Sbjct: 275 VSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGSKAPKDVKIQGIWYAQLE 329
>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 210 bits (534), Expect = 1e-54 Identities = 103/115 (89%), Positives = 108/115 (93%) Frame = -1 Query: 434 LVATGKPESFSGPFLVPSYRGSSFLDPKCRGGSTGYDNAVALPAGGRGDEEELAKENVKN 255 LVA+GKPESFSG FLVPSYRGSSFLDPK RGGSTGYDNAVALPAGGRGDEEEL KENVKN Sbjct: 215 LVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKN 274 Query: 254 ASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 90 +S TG ITLSVT+SKPETGEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLE Sbjct: 275 TASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 329
>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 325 Score = 207 bits (528), Expect = 7e-54 Identities = 109/117 (93%), Positives = 110/117 (94%) Frame = -1 Query: 434 LVATGKPESFSGPFLVPSYRGSSFLDPKCRGGSTGYDNAVALPAGGRGDEEELAKENVKN 255 LVATGKPESF PFLVPSYRGSSFLDPK RGGSTGYDNA ALP GGRGDEEELAKENVKN Sbjct: 212 LVATGKPESFR-PFLVPSYRGSSFLDPKGRGGSTGYDNAGALPRGGRGDEEELAKENVKN 270 Query: 254 ASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLESN 84 ASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDL +APKDVKIQGVWYAQLESN Sbjct: 271 ASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDL--EAPKDVKIQGVWYAQLESN 325
>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 206 bits (524), Expect = 2e-53 Identities = 102/116 (87%), Positives = 109/116 (93%) Frame = -1 Query: 434 LVATGKPESFSGPFLVPSYRGSSFLDPKCRGGSTGYDNAVALPAGGRGDEEELAKENVKN 255 LVA+GKP+SFSG FLVPSYRGSSFLDPK RG STGYDNAVALPAGGRGDEEEL KEN K+ Sbjct: 214 LVASGKPDSFSGEFLVPSYRGSSFLDPKGRGASTGYDNAVALPAGGRGDEEELGKENNKS 273 Query: 254 ASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLES 87 A+SS G ITLSVT++KPETGEVIGVFES+QPSDTDLGAKAPKDVKIQGVWYAQLES Sbjct: 274 AASSKGKITLSVTQTKPETGEVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLES 329
>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 331 Score = 204 bits (520), Expect = 6e-53 Identities = 99/115 (86%), Positives = 106/115 (92%) Frame = -1 Query: 434 LVATGKPESFSGPFLVPSYRGSSFLDPKCRGGSTGYDNAVALPAGGRGDEEELAKENVKN 255 L A+GKPESFSG FLVPSYRGSSFLDPK RGGSTGYDNAVALPAGGRGDEEEL+KENVKN Sbjct: 217 LEASGKPESFSGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELSKENVKN 276 Query: 254 ASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 90 ++S G ITL +TKSKPETGEVIGVFES+QPSDTDLGAK PKDVKIQGVWY Q+E Sbjct: 277 TAASVGEITLKITKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQIE 331
>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 204 bits (519), Expect = 8e-53 Identities = 101/115 (87%), Positives = 106/115 (92%) Frame = -1 Query: 434 LVATGKPESFSGPFLVPSYRGSSFLDPKCRGGSTGYDNAVALPAGGRGDEEELAKENVKN 255 LVA+GKPESFSG FLVPSYRGSSFLDPK RGGSTGYDNAVALPAGGRGDEEEL KEN KN Sbjct: 216 LVASGKPESFSGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENNKN 275 Query: 254 ASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 90 +SS G ITLSVT SKPETGEVIGVF+S+QPSDTDLGAK PKDVKI+GVWYAQLE Sbjct: 276 VASSKGTITLSVTSSKPETGEVIGVFQSLQPSDTDLGAKVPKDVKIEGVWYAQLE 330
>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 333 Score = 204 bits (518), Expect = 1e-52 Identities = 100/116 (86%), Positives = 106/116 (91%) Frame = -1 Query: 434 LVATGKPESFSGPFLVPSYRGSSFLDPKCRGGSTGYDNAVALPAGGRGDEEELAKENVKN 255 LVA+GKPESFS FLVPSYRGSSFLDPK RGGSTGYDNAVALPAGGRGDEEEL KENVKN Sbjct: 218 LVASGKPESFSVDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKN 277 Query: 254 ASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLES 87 +S TG IT +VTKS P+TGEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLES Sbjct: 278 TASLTGKITFTVTKSNPQTGEVIGVFESIQPSDTDLGAKTPKDVKIQGIWYAQLES 333
>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 202 bits (515), Expect = 2e-52 Identities = 99/115 (86%), Positives = 105/115 (91%) Frame = -1 Query: 434 LVATGKPESFSGPFLVPSYRGSSFLDPKCRGGSTGYDNAVALPAGGRGDEEELAKENVKN 255 L A+GKP+SF+G FLVPSYRGSSFLDPK RGGSTGYDNAVALPAGGRGDEEEL KENVKN Sbjct: 218 LDASGKPDSFTGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELVKENVKN 277 Query: 254 ASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 90 ++S G ITL VTKSKPETGEVIGVFES+QPSDTDLGAK PKDVKIQGVWY QLE Sbjct: 278 TAASVGEITLKVTKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQLE 332
>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 291 Score = 150 bits (378), Expect = 2e-36 Identities = 75/111 (67%), Positives = 84/111 (75%) Frame = -1 Query: 422 GKPESFSGPFLVPSYRGSSFLDPKCRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSS 243 G + G FLVPSYRGSSFLDPK RGGSTGYDNAVALPA R D EEL KENVK + Sbjct: 183 GTLDGIKGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKENVKITKAL 240 Query: 242 TGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 90 G+ SV K P TGE+ GVFES+QPSDTDLGAK PKD+K+ G+WYAQL+ Sbjct: 241 KGSAVFSVAKVDPVTGEIAGVFESIQPSDTDLGAKPPKDIKVTGLWYAQLK 291
>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 293 Score = 147 bits (370), Expect = 1e-35 Identities = 73/110 (66%), Positives = 83/110 (75%) Frame = -1 Query: 422 GKPESFSGPFLVPSYRGSSFLDPKCRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSS 243 G ++ G F+VPSYRGSSFLDPK RGGSTGYDNAVALPA R D EEL KENVK+ + Sbjct: 184 GTLDNIKGDFVVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKENVKSTKAL 241 Query: 242 TGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQL 93 G+ SV K TGE+ GVFES+QPSDTDLGAK PKD+KI G+WY QL Sbjct: 242 KGSAVFSVAKVNTATGEIAGVFESIQPSDTDLGAKPPKDIKITGLWYGQL 291
>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 338 Score = 146 bits (369), Expect = 2e-35 Identities = 72/114 (63%), Positives = 85/114 (74%) Frame = -1 Query: 434 LVATGKPESFSGPFLVPSYRGSSFLDPKCRGGSTGYDNAVALPAGGRGDEEELAKENVKN 255 L+A G F G F VPSYRG++FLDPK RGG++GYD AVALPA G D+EE AKEN K+ Sbjct: 223 LLAKGDAGQFLGQFDVPSYRGATFLDPKGRGGASGYDTAVALPASG--DDEEYAKENSKS 280 Query: 254 ASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQL 93 ++S G I V K ETGE+ GVFES+QPSDTDLGAK PKD+K GVWYAQ+ Sbjct: 281 TAASVGTIAFKVAKVNAETGEIAGVFESIQPSDTDLGAKVPKDIKTSGVWYAQI 334
>PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 273 Score = 124 bits (310), Expect = 1e-28 Identities = 61/106 (57%), Positives = 78/106 (73%) Frame = -1 Query: 407 FSGPFLVPSYRGSSFLDPKCRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNIT 228 F G F VPSYRG++FLDPK RG +GYDNAVALPA + D+E+L + NVK A G I+ Sbjct: 170 FEGTFKVPSYRGAAFLDPKGRGVVSGYDNAVALPA--QADDEDLTRTNVKRAEILNGKIS 227 Query: 227 LSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 90 L + K +GE+ G FES QPSDTDLGA PK+VKI+G++YA++E Sbjct: 228 LQIAKVDSSSGEIAGTFESEQPSDTDLGADEPKEVKIRGIFYARVE 273
>PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 275 Score = 119 bits (299), Expect = 2e-27 Identities = 63/105 (60%), Positives = 78/105 (74%) Frame = -1 Query: 407 FSGPFLVPSYRGSSFLDPKCRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNIT 228 F G F VPSYRG++FLDPK RG +TGYDNAVALPA D+E+ A NVK G+I+ Sbjct: 171 FEGDFRVPSYRGATFLDPKGRGLATGYDNAVALPA--TADKEDYA--NVKQTPIGKGSIS 226 Query: 227 LSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQL 93 L VTK TGE+ GVF+S QPSDTDLGAK P +VKI+G++YA++ Sbjct: 227 LQVTKVDQATGEIAGVFDSEQPSDTDLGAKEPVEVKIRGIFYARV 271
>PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 272 Score = 112 bits (281), Expect = 3e-25 Identities = 59/106 (55%), Positives = 75/106 (70%) Frame = -1 Query: 407 FSGPFLVPSYRGSSFLDPKCRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNIT 228 F G F VPSYR ++FLDPK RG ++GYD+A+ALP + EEELA+ NVK S + G I+ Sbjct: 168 FKGEFNVPSYRTANFLDPKGRGLASGYDSAIALP---QAKEEELARANVKRFSLTKGQIS 224 Query: 227 LSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 90 L+V K TGE+ G FES Q SD D+GA P +VKIQGV+YA +E Sbjct: 225 LNVAKVDGRTGEIAGTFESEQLSDDDMGAHEPHEVKIQGVFYASIE 270
>PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 272 Score = 112 bits (281), Expect = 3e-25 Identities = 59/106 (55%), Positives = 75/106 (70%) Frame = -1 Query: 407 FSGPFLVPSYRGSSFLDPKCRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNIT 228 F G F VPSYR ++FLDPK RG ++GYD+A+ALP + EEELA+ NVK S + G I+ Sbjct: 168 FKGEFNVPSYRTANFLDPKGRGLASGYDSAIALP---QAKEEELARANVKRFSLTKGQIS 224 Query: 227 LSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 90 L+V K TGE+ G FES Q SD D+GA P +VKIQGV+YA +E Sbjct: 225 LNVAKVDGRTGEIAGTFESEQLSDDDMGAHEPHEVKIQGVFYASIE 270
>PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 277 Score = 112 bits (279), Expect = 5e-25 Identities = 56/104 (53%), Positives = 75/104 (72%) Frame = -1 Query: 401 GPFLVPSYRGSSFLDPKCRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLS 222 G + VPSYR S+FLDPK RG +TGY++AVA+P+ G D E+L KENVK + G I+L+ Sbjct: 172 GGYRVPSYRTSNFLDPKARGLTTGYESAVAIPSAG--DAEDLTKENVKRFVTGQGEISLA 229 Query: 221 VTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 90 V+K TGEV GVF ++QPSDTD+G K DVK+ G +Y ++E Sbjct: 230 VSKVDGATGEVAGVFTAIQPSDTDMGGKEAVDVKLVGQFYGRIE 273
>PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 274 Score = 111 bits (277), Expect = 9e-25 Identities = 55/108 (50%), Positives = 73/108 (67%) Frame = -1 Query: 407 FSGPFLVPSYRGSSFLDPKCRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNIT 228 F G F VPSYRG+ FLDPK RG TGYDNAVALP+ + + N K G ++ Sbjct: 171 FVGDFNVPSYRGAGFLDPKARGLYTGYDNAVALPSAA-----DKFRTNKKETPLGKGTLS 225 Query: 227 LSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLESN 84 L VT+ TGE+ G+FES QPSDTDLGAK P DVK++G++Y +++++ Sbjct: 226 LQVTQVDGSTGEIAGIFESEQPSDTDLGAKEPLDVKVRGIFYGRVDTD 273
>PSBO_PINPS (P81665) Oxygen-evolving enhancer protein 1 (OEE1) (33 kDa subunit| of oxygen evolving system of photosystem II) (33 kDa thylakoid membrane protein) (Fragments) Length = 26 Score = 40.0 bits (92), Expect = 0.002 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = -1 Query: 347 RGGSTGYDNAVALPAGGR 294 +GGSTGYDNAVALPAGGR Sbjct: 9 KGGSTGYDNAVALPAGGR 26
>CH10_ENTFA (Q93EU7) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 94 Score = 34.3 bits (77), Expect = 0.13 Identities = 23/54 (42%), Positives = 28/54 (51%) Frame = -1 Query: 278 LAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 117 +AKE K G + SV K KP+TGEVI V E + G K P +VKI Sbjct: 13 VAKEEEKTVG---GIVLASVAKEKPQTGEVIAVGEG---RVLENGTKVPMEVKI 60
>MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog| Length = 241 Score = 31.2 bits (69), Expect = 1.1 Identities = 27/63 (42%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -1 Query: 317 VALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFES-VQPSDTDLGA 141 V A G EEE A+ K G + L T SKP+ EVIG FES VQ GA Sbjct: 72 VMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPD--EVIGYFESFVQNDFARAGA 129 Query: 140 KAP 132 AP Sbjct: 130 VAP 132
>DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta) (Adapter| protein containing PH domain, PTB domain and leucine zipper motif 2) Length = 662 Score = 30.8 bits (68), Expect = 1.5 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -1 Query: 299 GRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQ 165 G+ E + +N+KN+ NI T S PET E+I +Q Sbjct: 405 GKKQESSCSSQNIKNSDIEDDNIVPKATASIPETEELIAPGTPIQ 449
>PDR15_ORYSA (Q7FMW4) Pleiotropic drug resistance protein 15| Length = 1509 Score = 30.0 bits (66), Expect = 2.5 Identities = 12/19 (63%), Positives = 14/19 (73%), Gaps = 3/19 (15%) Frame = -3 Query: 375 GFLFPRPKVP-WWL--YWL 328 GF PRPK+P WW+ YWL Sbjct: 1414 GFFIPRPKIPKWWVWYYWL 1432
>MECR_RAT (Q9Z311) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.38) (Nuclear receptor-binding factor 1) (NRBF-1) Length = 373 Score = 30.0 bits (66), Expect = 2.5 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = -1 Query: 167 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVK--ILIFCACIR 36 QP + KD+K++G W +Q + N S E K ILI C IR Sbjct: 291 QPVTASVSMLIFKDLKLRGFWLSQWKKNHSPDEFKELILILCNLIR 336
>PDR8_ARATH (Q9XIE2) Pleiotropic drug resistance protein 8| Length = 1469 Score = 29.6 bits (65), Expect = 3.3 Identities = 11/19 (57%), Positives = 14/19 (73%), Gaps = 3/19 (15%) Frame = -3 Query: 375 GFLFPRPKVP-WWL--YWL 328 GF PRPK+P WW+ YW+ Sbjct: 1373 GFFIPRPKIPKWWIWYYWI 1391
>LEPA_PHOLL (Q7N1X3) GTP-binding protein lepA| Length = 598 Score = 29.6 bits (65), Expect = 3.3 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Frame = +1 Query: 43 HAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSDGCTLSKTPITSPVSGLLLVT 222 +A ++ IFT + D W++ ++ + V D TL++ P P+ G V Sbjct: 233 NADRLGIFTPKRVDRDVLGCGEVGWLVCAIKDILGAPVGDTLTLARQPAEKPLPGFKKVK 292 Query: 223 LRV---MLPVEEDAFFTF 267 +V + PV D + F Sbjct: 293 PQVYAGLFPVSSDDYEAF 310
>PDR7_ARATH (Q7PC86) Probable pleiotropic drug resistance protein 7| Length = 1442 Score = 29.3 bits (64), Expect = 4.3 Identities = 11/19 (57%), Positives = 14/19 (73%), Gaps = 3/19 (15%) Frame = -3 Query: 375 GFLFPRPKVP-WWL--YWL 328 GF PRPK+P WW+ YW+ Sbjct: 1346 GFFIPRPKIPKWWVWYYWI 1364
>PDR12_ORYSA (Q5Z9S8) Pleiotropic drug resistance protein 12| Length = 1500 Score = 29.3 bits (64), Expect = 4.3 Identities = 11/19 (57%), Positives = 14/19 (73%), Gaps = 3/19 (15%) Frame = -3 Query: 375 GFLFPRPKVP-WWL--YWL 328 GF PRP++P WW+ YWL Sbjct: 1405 GFFIPRPRIPKWWIWYYWL 1423
>PDR2_ORYSA (Q8GU92) Probable pleiotropic drug resistance protein 2| Length = 1464 Score = 29.3 bits (64), Expect = 4.3 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -3 Query: 375 GFLFPRPKVPWWLYW 331 GF+ PRPKVP W W Sbjct: 1373 GFIIPRPKVPIWWRW 1387
>MECR_MOUSE (Q9DCS3) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.38) Length = 373 Score = 29.3 bits (64), Expect = 4.3 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -1 Query: 167 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVKILIFCAC 42 QP + KD+K++G W +Q + N S E K LI C Sbjct: 291 QPVTASVSLLIFKDLKLRGFWLSQWKKNHSPDEFKELILTLC 332
>PDR1_ARATH (Q94A18) Pleiotropic drug resistance protein 1| Length = 1416 Score = 28.9 bits (63), Expect = 5.7 Identities = 10/19 (52%), Positives = 15/19 (78%), Gaps = 3/19 (15%) Frame = -3 Query: 375 GFLFPRPKVP-WWL--YWL 328 GF+ PRP++P WW+ YW+ Sbjct: 1320 GFVIPRPRIPKWWIWYYWI 1338
>ILVC_HELPJ (Q9ZMA9) Ketol-acid reductoisomerase (EC 1.1.1.86)| (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) Length = 330 Score = 28.9 bits (63), Expect = 5.7 Identities = 15/25 (60%), Positives = 19/25 (76%) Frame = -1 Query: 230 TLSVTKSKPETGEVIGVFESVQPSD 156 +LSV+K+K E EV+GV E VQ SD Sbjct: 52 SLSVSKAKKEGFEVLGVKELVQQSD 76
>PDR7_ORYSA (Q8GU88) Putative pleiotropic drug resistance protein 7| Length = 1444 Score = 28.5 bits (62), Expect = 7.4 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -3 Query: 375 GFLFPRPKVPWWLYW 331 GFL PRP++P W W Sbjct: 1352 GFLIPRPRIPIWWRW 1366
>SDHD_BACHK (Q6HKG3) Probable D-serine dehydratase (EC 4.3.1.18) (D-serine| deaminase) (DSD) Length = 446 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = -1 Query: 287 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFES 171 + L++ENVK+A + K PET E G+ ES Sbjct: 39 DSPLSEENVKDAEERLKRFASYIAKVFPETKETKGIIES 77
>SDHD_BACCZ (Q63D23) Probable D-serine dehydratase (EC 4.3.1.18) (D-serine| deaminase) (DSD) Length = 446 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = -1 Query: 287 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFES 171 + L++ENVK+A + K PET E G+ ES Sbjct: 39 DSPLSEENVKDAEERLKRFASYIAKVFPETKETKGIIES 77
>PDR4_ORYSA (Q8GU89) Pleiotropic drug resistance protein 4| Length = 1450 Score = 28.5 bits (62), Expect = 7.4 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -3 Query: 375 GFLFPRPKVPWWLYW 331 G+L PRPK+P W W Sbjct: 1358 GYLIPRPKIPVWWRW 1372
>CHS3_GERHY (P48392) Chalcone synthase 3 (EC 2.3.1.74) (Naringenin-chalcone| synthase 3) Length = 403 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = -3 Query: 132 QGCQDPGCVVRAARV*LEHSRSEDTHLLCMHTWVGRWRGKNRGH 1 QGC G V+R A+ E+++ ++C +RG N GH Sbjct: 168 QGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPNEGH 211
>PDR3_TOBAC (Q5W274) Pleiotropic drug resistance protein 3 (NtPDR3)| Length = 1447 Score = 28.5 bits (62), Expect = 7.4 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -3 Query: 375 GFLFPRPKVPWWLYW 331 GF+ PRP +P WL W Sbjct: 702 GFIIPRPSMPIWLKW 716
>MSH3_HUMAN (P20585) DNA mismatch repair protein Msh3 (Divergent upstream| protein) (DUP) (Mismatch repair protein 1) (MRP1) Length = 1137 Score = 28.1 bits (61), Expect = 9.7 Identities = 17/38 (44%), Positives = 23/38 (60%) Frame = -1 Query: 272 KENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPS 159 KENV++ GNI + + +P TGEV VF+S Q S Sbjct: 375 KENVRDKKK--GNIFIGIVGVQPATGEV--VFDSFQDS 408
>CH103_RHIME (Q930X9) 10 kDa chaperonin 3 (Protein Cpn10 3) (groES protein 3)| Length = 105 Score = 28.1 bits (61), Expect = 9.7 Identities = 19/47 (40%), Positives = 21/47 (44%) Frame = -1 Query: 257 NASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 117 N S G I K KP+ GEVI V S + G P DVKI Sbjct: 18 NTQSKGGIIIPDTAKEKPQEGEVIAVGPG---SRDESGKLIPLDVKI 61
>PMP2_CHLPN (Q9Z3A1) Probable outer membrane protein pmp2 precursor| (Polymorphic membrane protein 2) (Outer membrane protein 7) Length = 841 Score = 28.1 bits (61), Expect = 9.7 Identities = 20/70 (28%), Positives = 27/70 (38%) Frame = -1 Query: 344 GGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQ 165 GG T + A A G+G +A + S +G+I G IG +V Sbjct: 214 GGETLFQGNTAPTAAGKGGAIAIADSGTLSISGDSGDIIFE--------GNTIGATGTVS 265 Query: 164 PSDTDLGAKA 135 S DLG A Sbjct: 266 HSAIDLGTSA 275
>ZBTB9_HUMAN (Q96C00) Zinc finger and BTB domain-containing protein 9| Length = 473 Score = 28.1 bits (61), Expect = 9.7 Identities = 24/76 (31%), Positives = 29/76 (38%), Gaps = 9/76 (11%) Frame = -1 Query: 377 RGSSFLDPKCRGGSTGYDNAVALPAGGRGDE---------EELAKENVKNASSSTGNITL 225 R S F P ST + P GG G E EE +E + G+ TL Sbjct: 172 RSSPFQTPVQSSASTESPASTESPVGGEGSELGEVLQIQVEEEEEEEEDDDDEDQGSATL 231 Query: 224 SVTKSKPETGEVIGVF 177 S T P+ V GVF Sbjct: 232 SQT---PQPQRVSGVF 244
>PDR12_ARATH (Q9M9E1) Pleiotropic drug resistance protein 12| Length = 1423 Score = 28.1 bits (61), Expect = 9.7 Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 3/19 (15%) Frame = -3 Query: 375 GFLFPRPKVP-W--WLYWL 328 GFL PRP +P W W YWL Sbjct: 1331 GFLIPRPSMPVWWEWYYWL 1349
>PDR11_ARATH (Q7PC84) Probable pleiotropic drug resistance protein 11| Length = 1454 Score = 28.1 bits (61), Expect = 9.7 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -3 Query: 375 GFLFPRPKVPWWLYW 331 GFL PRP++P W W Sbjct: 1359 GFLIPRPQIPIWWRW 1373
>PDR6_ARATH (Q7PC87) Pleiotropic drug resistance protein 6| Length = 1453 Score = 28.1 bits (61), Expect = 9.7 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -3 Query: 375 GFLFPRPKVPWWLYW 331 GFL PRP++P W W Sbjct: 1358 GFLIPRPQIPIWWRW 1372 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,364,372 Number of Sequences: 219361 Number of extensions: 901812 Number of successful extensions: 3740 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 3647 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3727 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
