ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaet25b12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472786.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1008 Score = 252 bits (127), Expect = 8e-64 Identities = 196/219 (89%) Strand = Plus / Minus Query: 179 gaggatgtcgcactgccgcctgacgacgccctgccgccccgtcttgacgccgacggtgcc 238 ||||| |||||| |||||||||||||||||||| || || |||||||||||||||| ||| Sbjct: 1005 gaggacgtcgcagtgccgcctgacgacgccctggcggccagtcttgacgccgacggcgcc 946 Query: 239 gagcttctgcatggccttggcgaagtcctggaagaacgcggtccggttgtcggcgtactg 298 |||||||||||| ||| ||||||||||| |||||| || ||||||||||||||||| | Sbjct: 945 gagcttctgcatcgccgcggcgaagtcctcgaagaaggccgtccggttgtcggcgtagcg 886 Query: 299 ctggacgaacaccttggtgggcgggtactcccacagcgcggcgtcggaggcgagcagccc 358 ||||||||||||| | || | |||||||||||||||||||||||||||||||||||| || Sbjct: 885 ctggacgaacaccctcgtcgccgggtactcccacagcgcggcgtcggaggcgagcaggcc 826 Query: 359 gaggccccggggcaggttcttgaagtagagctcgtcgaa 397 ||| || || ||||||||||||||||||| ||||||||| Sbjct: 825 gagcccgcgcggcaggttcttgaagtagacctcgtcgaa 787
>emb|AL663017.3|OSJN00149 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060P14, complete sequence Length = 139418 Score = 252 bits (127), Expect = 8e-64 Identities = 196/219 (89%) Strand = Plus / Plus Query: 179 gaggatgtcgcactgccgcctgacgacgccctgccgccccgtcttgacgccgacggtgcc 238 ||||| |||||| |||||||||||||||||||| || || |||||||||||||||| ||| Sbjct: 100927 gaggacgtcgcagtgccgcctgacgacgccctggcggccagtcttgacgccgacggcgcc 100986 Query: 239 gagcttctgcatggccttggcgaagtcctggaagaacgcggtccggttgtcggcgtactg 298 |||||||||||| ||| ||||||||||| |||||| || ||||||||||||||||| | Sbjct: 100987 gagcttctgcatcgccgcggcgaagtcctcgaagaaggccgtccggttgtcggcgtagcg 101046 Query: 299 ctggacgaacaccttggtgggcgggtactcccacagcgcggcgtcggaggcgagcagccc 358 ||||||||||||| | || | |||||||||||||||||||||||||||||||||||| || Sbjct: 101047 ctggacgaacaccctcgtcgccgggtactcccacagcgcggcgtcggaggcgagcaggcc 101106 Query: 359 gaggccccggggcaggttcttgaagtagagctcgtcgaa 397 ||| || || ||||||||||||||||||| ||||||||| Sbjct: 101107 gagcccgcgcggcaggttcttgaagtagacctcgtcgaa 101145
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 252 bits (127), Expect = 8e-64 Identities = 196/219 (89%) Strand = Plus / Plus Query: 179 gaggatgtcgcactgccgcctgacgacgccctgccgccccgtcttgacgccgacggtgcc 238 ||||| |||||| |||||||||||||||||||| || || |||||||||||||||| ||| Sbjct: 23210735 gaggacgtcgcagtgccgcctgacgacgccctggcggccagtcttgacgccgacggcgcc 23210794 Query: 239 gagcttctgcatggccttggcgaagtcctggaagaacgcggtccggttgtcggcgtactg 298 |||||||||||| ||| ||||||||||| |||||| || ||||||||||||||||| | Sbjct: 23210795 gagcttctgcatcgccgcggcgaagtcctcgaagaaggccgtccggttgtcggcgtagcg 23210854 Query: 299 ctggacgaacaccttggtgggcgggtactcccacagcgcggcgtcggaggcgagcagccc 358 ||||||||||||| | || | |||||||||||||||||||||||||||||||||||| || Sbjct: 23210855 ctggacgaacaccctcgtcgccgggtactcccacagcgcggcgtcggaggcgagcaggcc 23210914 Query: 359 gaggccccggggcaggttcttgaagtagagctcgtcgaa 397 ||| || || ||||||||||||||||||| ||||||||| Sbjct: 23210915 gagcccgcgcggcaggttcttgaagtagacctcgtcgaa 23210953
>tpe|BN000584.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx55 gene for class III peroxidase 55 precursor, exon 1 Length = 1008 Score = 252 bits (127), Expect = 8e-64 Identities = 196/219 (89%) Strand = Plus / Minus Query: 179 gaggatgtcgcactgccgcctgacgacgccctgccgccccgtcttgacgccgacggtgcc 238 ||||| |||||| |||||||||||||||||||| || || |||||||||||||||| ||| Sbjct: 1005 gaggacgtcgcagtgccgcctgacgacgccctggcggccagtcttgacgccgacggcgcc 946 Query: 239 gagcttctgcatggccttggcgaagtcctggaagaacgcggtccggttgtcggcgtactg 298 |||||||||||| ||| ||||||||||| |||||| || ||||||||||||||||| | Sbjct: 945 gagcttctgcatcgccgcggcgaagtcctcgaagaaggccgtccggttgtcggcgtagcg 886 Query: 299 ctggacgaacaccttggtgggcgggtactcccacagcgcggcgtcggaggcgagcagccc 358 ||||||||||||| | || | |||||||||||||||||||||||||||||||||||| || Sbjct: 885 ctggacgaacaccctcgtcgccgggtactcccacagcgcggcgtcggaggcgagcaggcc 826 Query: 359 gaggccccggggcaggttcttgaagtagagctcgtcgaa 397 ||| || || ||||||||||||||||||| ||||||||| Sbjct: 825 gagcccgcgcggcaggttcttgaagtagacctcgtcgaa 787
>emb|AL606653.3|OSJN00104 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0048E02, complete sequence Length = 121337 Score = 252 bits (127), Expect = 8e-64 Identities = 196/219 (89%) Strand = Plus / Plus Query: 179 gaggatgtcgcactgccgcctgacgacgccctgccgccccgtcttgacgccgacggtgcc 238 ||||| |||||| |||||||||||||||||||| || || |||||||||||||||| ||| Sbjct: 48888 gaggacgtcgcagtgccgcctgacgacgccctggcggccagtcttgacgccgacggcgcc 48947 Query: 239 gagcttctgcatggccttggcgaagtcctggaagaacgcggtccggttgtcggcgtactg 298 |||||||||||| ||| ||||||||||| |||||| || ||||||||||||||||| | Sbjct: 48948 gagcttctgcatcgccgcggcgaagtcctcgaagaaggccgtccggttgtcggcgtagcg 49007 Query: 299 ctggacgaacaccttggtgggcgggtactcccacagcgcggcgtcggaggcgagcagccc 358 ||||||||||||| | || | |||||||||||||||||||||||||||||||||||| || Sbjct: 49008 ctggacgaacaccctcgtcgccgggtactcccacagcgcggcgtcggaggcgagcaggcc 49067 Query: 359 gaggccccggggcaggttcttgaagtagagctcgtcgaa 397 ||| || || ||||||||||||||||||| ||||||||| Sbjct: 49068 gagcccgcgcggcaggttcttgaagtagacctcgtcgaa 49106
>gb|AY111409.1| Zea mays CL6947_1 mRNA sequence Length = 490 Score = 224 bits (113), Expect = 2e-55 Identities = 194/221 (87%) Strand = Plus / Plus Query: 195 cgcctgacgacgccctgccgccccgtcttgacgccgacggtgccgagcttctgcatggcc 254 ||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||| || Sbjct: 193 cgcctgacgacgccctggcgccccgtcttgacgccgacggcgccgagcctctgcatcgcg 252 Query: 255 ttggcgaagtcctggaagaacgcggtccggttgtcggcgtactgctggacgaacaccttg 314 ||||||||||| |||||| ||||| |||||| ||||||| ||||| |||| ||| || Sbjct: 253 gcggcgaagtcctcgaagaaggcggtgcggttggcggcgtagcgctgggcgaagaccctg 312 Query: 315 gtgggcgggtactcccacagcgcggcgtcggaggcgagcagcccgaggccccggggcagg 374 ||||||||||||||||| | |||||||||||||||||||| |||||||| |||||||| Sbjct: 313 gtgggcgggtactcccagatggcggcgtcggaggcgagcaggccgaggccgtggggcagg 372 Query: 375 ttcttgaagtagagctcgtcgaagtcccgcggcgtcacgat 415 |||||| ||||| ||||||||||||||| ||||| ||||| Sbjct: 373 ttcttgtagtaggtctcgtcgaagtcccggggcgtgacgat 413
>ref|NM_194141.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1601 Score = 46.1 bits (23), Expect = 0.090 Identities = 38/43 (88%) Strand = Plus / Minus Query: 370 gcaggttcttgaagtagagctcgtcgaagtcccgcggcgtcac 412 |||||||||||||||| | | ||||||| ||||||||||||| Sbjct: 974 gcaggttcttgaagtactggttgtcgaaggcccgcggcgtcac 932
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.090 Identities = 38/43 (88%) Strand = Plus / Minus Query: 370 gcaggttcttgaagtagagctcgtcgaagtcccgcggcgtcac 412 |||||||||||||||| | | ||||||| ||||||||||||| Sbjct: 839691 gcaggttcttgaagtactggttgtcgaaggcccgcggcgtcac 839649
>gb|AE005003.1| Halobacterium sp. NRC-1 section 34 of 170 of the complete genome Length = 14379 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Minus Query: 165 cgcgccggtcagtcgaggatgtc 187 ||||||||||||||||||||||| Sbjct: 8077 cgcgccggtcagtcgaggatgtc 8055
>dbj|AK061511.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G05, full insert sequence Length = 1602 Score = 46.1 bits (23), Expect = 0.090 Identities = 38/43 (88%) Strand = Plus / Minus Query: 370 gcaggttcttgaagtagagctcgtcgaagtcccgcggcgtcac 412 |||||||||||||||| | | ||||||| ||||||||||||| Sbjct: 974 gcaggttcttgaagtactggttgtcgaaggcccgcggcgtcac 932
>dbj|AP005486.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1138_B05 Length = 113982 Score = 46.1 bits (23), Expect = 0.090 Identities = 38/43 (88%) Strand = Plus / Minus Query: 370 gcaggttcttgaagtagagctcgtcgaagtcccgcggcgtcac 412 |||||||||||||||| | | ||||||| ||||||||||||| Sbjct: 38447 gcaggttcttgaagtactggttgtcgaaggcccgcggcgtcac 38405
>tpe|BN000627.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx98 gene for class III peroxidase 98 precursor, exons 1-3 Length = 2641 Score = 46.1 bits (23), Expect = 0.090 Identities = 38/43 (88%) Strand = Plus / Minus Query: 370 gcaggttcttgaagtagagctcgtcgaagtcccgcggcgtcac 412 |||||||||||||||| | | ||||||| ||||||||||||| Sbjct: 2444 gcaggttcttgaagtactggttgtcgaaggcccgcggcgtcac 2402
>dbj|AK110559.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-C10, full insert sequence Length = 1032 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 tgccgagcttctgcatggcctt 256 |||||||||||||||||||||| Sbjct: 332 tgccgagcttctgcatggcctt 311
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 387 agctcgtcgaagtcccgcggcgtcac 412 ||||||||||||||| |||||||||| Sbjct: 141911 agctcgtcgaagtccggcggcgtcac 141886
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 339 gcgtcggaggcgagcagcccg 359 ||||||||||||||||||||| Sbjct: 201512 gcgtcggaggcgagcagcccg 201532
>emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in linkage group 3, complete sequence Length = 241961 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 gcaattcacaacttcattcagaaaa 95 |||||||||||||||| |||||||| Sbjct: 172940 gcaattcacaacttcactcagaaaa 172964
>gb|AY109396.1| Zea mays CL5154_1 mRNA sequence Length = 1182 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 239 gagcttctgcatggccttggcgaag 263 |||||||| |||||||||||||||| Sbjct: 283 gagcttctccatggccttggcgaag 259
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 gcggcgtcggaggcgagcagc 356 ||||||||||||||||||||| Sbjct: 3860357 gcggcgtcggaggcgagcagc 3860377
>ref|NM_032482.1| Homo sapiens DOT1-like, histone H3 methyltransferase (S. cerevisiae) (DOT1L), mRNA Length = 4889 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 tgccgcctgacgacgccctg 211 |||||||||||||||||||| Sbjct: 2024 tgccgcctgacgacgccctg 2043
>gb|AC129189.3| Mus musculus BAC clone RP24-67O22 from chromosome 15, complete sequence Length = 152947 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ttcacaacttcattcagaaa 94 |||||||||||||||||||| Sbjct: 59232 ttcacaacttcattcagaaa 59251
>ref|XM_654420.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1908.2), mRNA Length = 2736 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 tcttgaagtagagctcgtcg 395 |||||||||||||||||||| Sbjct: 1717 tcttgaagtagagctcgtcg 1698
>gb|AC117598.7| Mus musculus chromosome 1, clone RP23-398H16, complete sequence Length = 196300 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 aaaatccaatcctaataata 133 |||||||||||||||||||| Sbjct: 144493 aaaatccaatcctaataata 144512
>emb|AL031601.4|HSY237C10 Human DNA sequence from clone XX-Y237C10 on chromosome 10 Contains a poly(A) binding protein, cytoplasmic 1 (PABPC1) pseudogene, an Ig kappa chain precursor V region pseudogene, a pseudogene similar to part of kinase suppressor of ras (KSR) and four CpG islands, complete sequence Length = 197700 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 caaaatccaatcctaataat 132 |||||||||||||||||||| Sbjct: 145591 caaaatccaatcctaataat 145572
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 cctggaagaacgcggtccgg 284 |||||||||||||||||||| Sbjct: 2938 cctggaagaacgcggtccgg 2919
>gb|AC101771.11| Mus musculus chromosome 15, clone RP24-104H19, complete sequence Length = 153992 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ttcacaacttcattcagaaa 94 |||||||||||||||||||| Sbjct: 18882 ttcacaacttcattcagaaa 18901
>gb|AC151734.3| Mus musculus BAC clone RP23-22O15 from chromosome 15, complete sequence Length = 229862 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ttcacaacttcattcagaaa 94 |||||||||||||||||||| Sbjct: 176098 ttcacaacttcattcagaaa 176117
>gb|AF509504.1| Homo sapiens DOT1-like protein (DOT1L) mRNA, complete cds Length = 4889 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 tgccgcctgacgacgccctg 211 |||||||||||||||||||| Sbjct: 2024 tgccgcctgacgacgccctg 2043
>dbj|AK095280.1| Homo sapiens cDNA FLJ37961 fis, clone CTONG2009643 Length = 3658 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 tgccgcctgacgacgccctg 211 |||||||||||||||||||| Sbjct: 180 tgccgcctgacgacgccctg 199
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 cagcgcggcgtcggaggcga 351 |||||||||||||||||||| Sbjct: 20926341 cagcgcggcgtcggaggcga 20926360
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 217 ccgtcttgacgccgacggtgccgagctt 244 ||||||||||||||||| ||||||||| Sbjct: 28670150 ccgtcttgacgccgacgcggccgagctt 28670123
>dbj|AP007207.1| Mus musculus molossinus genomic DNA, chromosome 1 clone:MSMg01-122K03, complete sequence Length = 173324 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 aaaatccaatcctaataata 133 |||||||||||||||||||| Sbjct: 80522 aaaatccaatcctaataata 80541
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 217 ccgtcttgacgccgacggtgccgagctt 244 ||||||||||||||||| ||||||||| Sbjct: 70716 ccgtcttgacgccgacgcggccgagctt 70689
>dbj|AK109551.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-A03, full insert sequence Length = 1325 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 cagcgcggcgtcggaggcga 351 |||||||||||||||||||| Sbjct: 969 cagcgcggcgtcggaggcga 950
>dbj|AK104754.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F11, full insert sequence Length = 1523 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 217 ccgtcttgacgccgacggtgccgagctt 244 ||||||||||||||||| ||||||||| Sbjct: 1114 ccgtcttgacgccgacgcggccgagctt 1087
>dbj|AK064918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M23, full insert sequence Length = 1618 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 217 ccgtcttgacgccgacggtgccgagctt 244 ||||||||||||||||| ||||||||| Sbjct: 1117 ccgtcttgacgccgacgcggccgagctt 1090
>emb|Z81107.1|CER07H5 Caenorhabditis elegans Cosmid R07H5, complete sequence Length = 33802 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 cgcttttcaattcacaaggc 30 |||||||||||||||||||| Sbjct: 5447 cgcttttcaattcacaaggc 5428
>tpe|BN000667.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx138 gene for class III peroxidase 138 precursor, exons 1-4 Length = 9140 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 cagcgcggcgtcggaggcga 351 |||||||||||||||||||| Sbjct: 8978 cagcgcggcgtcggaggcga 8959
>tpe|BN000619.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx90 gene for class III peroxidase 90 precursor, exons 1-4 Length = 2690 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 217 ccgtcttgacgccgacggtgccgagctt 244 ||||||||||||||||| ||||||||| Sbjct: 2640 ccgtcttgacgccgacgcggccgagctt 2613
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 cagcgcggcgtcggaggcga 351 |||||||||||||||||||| Sbjct: 20852555 cagcgcggcgtcggaggcga 20852574
>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 182172 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 cagcgcggcgtcggaggcga 351 |||||||||||||||||||| Sbjct: 11831 cagcgcggcgtcggaggcga 11850
>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107819 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 cagcgcggcgtcggaggcga 351 |||||||||||||||||||| Sbjct: 32654 cagcgcggcgtcggaggcga 32635
>gb|AC004490.1|AC004490 Homo sapiens chromosome 19, cosmid R29381, complete sequence Length = 39143 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 tgccgcctgacgacgccctg 211 |||||||||||||||||||| Sbjct: 35161 tgccgcctgacgacgccctg 35180
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 agcttctgcatggccttggc 259 |||||||||||||||||||| Sbjct: 3147097 agcttctgcatggccttggc 3147078
>dbj|AB058717.1| Homo sapiens mRNA for KIAA1814 protein, partial cds Length = 5576 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 tgccgcctgacgacgccctg 211 |||||||||||||||||||| Sbjct: 686 tgccgcctgacgacgccctg 705
>dbj|AK074120.1| Homo sapiens mRNA for FLJ00192 protein Length = 4540 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 tgccgcctgacgacgccctg 211 |||||||||||||||||||| Sbjct: 1689 tgccgcctgacgacgccctg 1708 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,566,491 Number of Sequences: 3902068 Number of extensions: 2566491 Number of successful extensions: 47896 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 45 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47608 Number of HSP's gapped (non-prelim): 288 length of query: 415 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 393 effective length of database: 17,147,199,772 effective search space: 6738849510396 effective search space used: 6738849510396 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
